Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1708 ATGGAAAGAATCCTCTCTCAGCTTTCTACTCTTCTTCCTCTTACTTTGGCAGTGATTTTTATCTTATTTGCTTTGGCTTCTTCAGCTGAACAAGAAGTTGTGACTTCAATAAAAACTGATGCTACTGCTCTTCTTAAGTTCAAGGATATGATTGACAAGGACCCAAATGGAGTGTTGTCCAGTTGGAAGCTTGAAAACAATCCATGTTCATGGTATGGAGTTTCATGCCAATCTGGAAGAGCGATTGCTCTTGATCTGAGTGGTTGTAATCTTGCAGGGAATGTTTATTTTGATCCTCTTTCTTCTATGGATATGTTGTTGGCTTTGAATTTGTCTACAAATTCCTTCACTATAAACTCAACTACTTTGCTTCGGCTTCCTTATAATTTGCAGCAACTTGAGCTCTCTCTTGCAAAAGTTGTAGGTAGTGTGCCTGAGAATCTTTTCTCCAAGTGTCCAAATCTTGTGTTTGTGGATCTTTCATTAAACAATCTGACAGGCTACCTTCCTGAAAATCTTCTTTTGAATGCTAATAAGCTTCAAGATCTTGATCTCTCTTACAACAATCTAACTGGGGCAATCTCAGGATTGAGAATTGATGAGAATTCTTGCAACTCTTTGTCGCGCGTTGAACTTTCGGGGAATCGAATTGTCGGTTCGATTCCAAATGCCATTTCAAACTGCACGAATCTGCAAACGCTTGGTTTGTCGTACAATTTTTTCAATGGGGAAATCCCAAGATCTTTAGGGGAACTCGGCAGTTTACAGAGGGTGGATCTATCTCACAATCAGCTCACTGGTTGGCTCCCTTCTGATTGGAGAAATGCGTGCAATTCACTTCAAGAACTAAGGCTTTGCTACAACAACATTTCTGGTGCAATTCCAGCTTCCTTCTCTGCTTGCTCTTGGCTTCAAATTCTGGATCTTTCAAATAACAACATATCTGGTCCTTTATCAGATTCCATCTTCAAAAATCTTGTCTCTTTACAGAGCTTGGTATTGAGTAATAACATTATCTCTGGACCATTGCCTTCATCCATATCTCACTGCAAAAAACTTCAGCTTGTAGACTTGAGTTCCAATAGAATTTCTGGTTTGATCTCACCAGATATATGCCCAGGTGCTGAGTCACTCCAGGAACTGAAAATGCCAGACAATCTCATCATAGGAGGAATCCCACCTGAACTCTCACTGTGTCCACAGCTAAAGACAATTGATTTTAGTTTAAACTATCTGAATGGCTCCATACCTGCAGAGCTTGGAAAGCTTCAGAATCTTGAACAGCTGATAGCATGGTTCAATAGCTTAGAAGGGAAAATCCCTCCAGAATTGGGGAAGTGTAGAAGCTTGAAGGATCTTATACTTAATAACAATCGTTTAAGTGGCGAAATCCCCACTGAATTTTTCAGTTGCAGCAATCTTGAATGGGTTTCACTTACGAGCAATGAACTCACTGGTGAGATCCCAAAAGAGTTTGGTCTTTTATCAAGACTGGCTGTTCTGCAACTCGGAAACAATAGCTTAAGTGGTCAGATACCAGCGGAGTTGGCAAACTGCAGCACTTTGGTTTGGTTGGATTTGAACAGCAATAAGCTTACAGGGGAAATCCCACCTAGACTTGGTAGGCAGCTTGGAGCCAAATCATTGAATGGGATTCTTTCTGGAAACACTCTAGTGTTTGTTCGAAATGTCGGGAATTCGTGCAAAGGAGTTGGGGGTTTGTTAGAGTTTGCTGGAATCAGACCTGAAAGACTTCAGCAGGAACCAACATTGAAGACCTGTGATTTCACTAGACTGTACTCTGGTCCGGTCCTCAGTCTGTTTACAAAGTACCAAACTTTGGAGTACTTGGATCTTTCTTACAATGAGCTTCGTGGGAGAATACCAGAAGAGTTTGGAGATATGGTTGCCTTGCAGGTTCTCGAATTATCACACAACCAACTTTCTGGCGAGATTCCAGCATCGTTCGGGCGCCTAAAGAACTTAGGAGTGTTTGATGCATCACATAACAGACTGCAGGGTCATATTCCAGATTCATTCTCGAACTTATCATTCTTAGTGCAAATTGATCTATCTTATAATGAACTAACTGGGCGAATTCCATCAAGGGGACAGCTCAGTACACTACCTGCAAGTCAGTATGCAAACAATCCAGGACTTTGTGGAGTTCCCTTGCCTGAATGCCAGAGTGAAGACCAGGCGGCGACAAATCCTAATGTAGATGCTGGAAAAGGAAGAACAAAGCCAGAAGCAGGGTCATGGGTTAATAGTATTGTTTTAGGTGTTCTTATTTCCATTGCCTGTGTCTGCATTTTGATTGTATGGGCCATTGCCATGCGTGCGAGACGAAAAGAAGCAGAGGAAGTGAAGATGCTTAATAGTTTACAAGCAATACATGCCCCTACTACATGGAAAATTGACAAAGAGAAAGAGCCACTGAGTATCAATGTGGCAACTTTTCAAAGACAACTAAGGAAGCTCAAATTCTCCCAACTGATTGAAGCTACTAATGGCTTCTCAGCAGAAAGTCTCATTGGGAGTGGTGGGTTCGGAGAAGTGTTTAAAGCAACGCTGAAGGATGGATCAAGTGTTGCGATCAAGAAACTGATACGTCTTAGTTGTCAGGGAGACCGTGAATTCATGGCGGAGATGGAAACTTTAGGAAAGATCAAACATGGAAATCTAGTACCTCTTCTAGGTTACTGTAAAATAGGTGAGGAGAGGCTGCTAGTGTATGAATTCATGGAGTTTGGTAGCCTAGAAGAGATGCTCCATGGAAGAGCAAAGATGCAAGATAGAAGAATTCTAACATGGGATGAAAGGAAAAAGATTGCTAGAGGTGCTGCTAAAGGACTCTGTTTCCTACATCACAACTGCATTCCACATATAATTCACAGAGACATGAAGTCCAGCAATGTACTCCTGGATCATGATTTAGAAGCAAGAGTTTCAGATTTCGGAATGGCAAGGCTGATAAGTGCTCTTGACACCCATCTGAGTGTAAGCACACTTGCAGGCACTCCTGGTTATGTCCCTCCTGAGTACTACCAAAGCTTCAGGTGCACAGCAAAAGGCGATGTCTATTCGTTCGGTGTCGTCCTCTTAGAACTCTTGACAGGGAAACGACCAACCGATAAGGAGGATTTTGGGGACACCAACTTGGTGGGATGGGTTAAAATGAAAGTTAATGATGGAAAACAAATGGAAGTGATAGATCCAGAGTTGCTTTCAGTAACCAAAGCAAGCGACGAATCAGAAGCAGAAGAAGTTAAAGAAATGGTTAGATATTTGGAGATATCTCTTCGTTGTGTAGAAGAGTTTCCTTCCAAAAGGCCTAACATGTTGCAGGTGGTGGCCATGCTGCGGGAGTTGATGCCCGGATCAACCAATGGAAGCAGCAACAGTGCTTGA 3411 42.16 MERILSQLSTLLPLTLAVIFILFALASSAEQEVVTSIKTDATALLKFKDMIDKDPNGVLSSWKLENNPCSWYGVSCQSGRAIALDLSGCNLAGNVYFDPLSSMDMLLALNLSTNSFTINSTTLLRLPYNLQQLELSLAKVVGSVPENLFSKCPNLVFVDLSLNNLTGYLPENLLLNANKLQDLDLSYNNLTGAISGLRIDENSCNSLSRVELSGNRIVGSIPNAISNCTNLQTLGLSYNFFNGEIPRSLGELGSLQRVDLSHNQLTGWLPSDWRNACNSLQELRLCYNNISGAIPASFSACSWLQILDLSNNNISGPLSDSIFKNLVSLQSLVLSNNIISGPLPSSISHCKKLQLVDLSSNRISGLISPDICPGAESLQELKMPDNLIIGGIPPELSLCPQLKTIDFSLNYLNGSIPAELGKLQNLEQLIAWFNSLEGKIPPELGKCRSLKDLILNNNRLSGEIPTEFFSCSNLEWVSLTSNELTGEIPKEFGLLSRLAVLQLGNNSLSGQIPAELANCSTLVWLDLNSNKLTGEIPPRLGRQLGAKSLNGILSGNTLVFVRNVGNSCKGVGGLLEFAGIRPERLQQEPTLKTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPASFGRLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSYNELTGRIPSRGQLSTLPASQYANNPGLCGVPLPECQSEDQAATNPNVDAGKGRTKPEAGSWVNSIVLGVLISIACVCILIVWAIAMRARRKEAEEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHGNLVPLLGYCKIGEERLLVYEFMEFGSLEEMLHGRAKMQDRRILTWDERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHDLEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVNDGKQMEVIDPELLSVTKASDESEAEEVKEMVRYLEISLRCVEEFPSKRPNMLQVVAMLRELMPGSTNGSSNSA 1136
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16748592 16752093 + Tan0006413.1 Tan11g1708 768645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1708 1136 Pfam Leucine rich repeat 472 532 IPR001611 GO:0005515(InterPro)
Tan11g1708 1136 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515(InterPro)
Tan11g1708 1136 Pfam Leucine rich repeat 607 648 IPR001611 GO:0005515(InterPro)
Tan11g1708 1136 Pfam Leucine rich repeat 279 337 IPR001611 GO:0005515(InterPro)
Tan11g1708 1136 FunFam serine/threonine-protein kinase BRI1-like 2 915 1132 - -
Tan11g1708 1136 FunFam serine/threonine-protein kinase BRI1-like 2 800 914 - -
Tan11g1708 1136 Gene3D - 553 609 - -
Tan11g1708 1136 ProSiteProfiles Protein kinase domain profile. 839 1125 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1708 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 606 728 - -
Tan11g1708 1136 CDD STKc_IRAK 845 1124 - -
Tan11g1708 1136 Gene3D Phosphorylase Kinase; domain 1 800 914 - -
Tan11g1708 1136 Gene3D Ribonuclease Inhibitor 177 728 IPR032675 -
Tan11g1708 1136 PRINTS Leucine-rich repeat signature 252 265 - -
Tan11g1708 1136 PRINTS Leucine-rich repeat signature 180 193 - -
Tan11g1708 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 367 - -
Tan11g1708 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 201 276 - -
Tan11g1708 1136 FunFam serine/threonine-protein kinase BRI1-like 2 39 150 - -
Tan11g1708 1136 SUPERFAMILY RNI-like 210 540 - -
Tan11g1708 1136 Pfam Brassinosteroid receptor island domain 550 608 IPR045381 -
Tan11g1708 1136 SMART serkin_6 839 1125 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1708 1136 Gene3D Transferase(Phosphotransferase) domain 1 915 1134 - -
Tan11g1708 1136 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 1124 IPR050647 -
Tan11g1708 1136 Pfam Leucine Rich Repeat 661 683 IPR001611 GO:0005515(InterPro)
Tan11g1708 1136 Pfam Leucine Rich Repeat 449 471 IPR001611 GO:0005515(InterPro)
Tan11g1708 1136 Pfam Leucine Rich Repeat 352 372 IPR001611 GO:0005515(InterPro)
Tan11g1708 1136 SMART LRR_typ_2 304 325 IPR003591 -
Tan11g1708 1136 SMART LRR_typ_2 252 275 IPR003591 -
Tan11g1708 1136 SMART LRR_typ_2 423 447 IPR003591 -
Tan11g1708 1136 SMART LRR_typ_2 326 350 IPR003591 -
Tan11g1708 1136 SMART LRR_typ_2 448 471 IPR003591 -
Tan11g1708 1136 SMART LRR_typ_2 495 519 IPR003591 -
Tan11g1708 1136 SMART LRR_typ_2 635 659 IPR003591 -
Tan11g1708 1136 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Tan11g1708 1136 SUPERFAMILY Protein kinase-like (PK-like) 820 1121 IPR011009 -
Tan11g1708 1136 SUPERFAMILY L domain-like 83 269 - -
Tan11g1708 1136 Gene3D Ribonuclease Inhibitor 39 150 IPR032675 -
Tan11g1708 1136 FunFam Leucine-rich repeat receptor protein kinase EMS1 465 560 - -
Tan11g1708 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 371 464 - -
Tan11g1708 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1708 1136 SUPERFAMILY L domain-like 596 724 - -
Tan11g1708 1136 Pfam Protein kinase domain 841 1118 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1708 1136 ProSitePatterns Protein kinases ATP-binding region signature. 845 868 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1376 Tan-Chr3:70266695 Tan11g1708 Tan-Chr11:16748592 1.80E-146 dispersed
Tan06g0493 Tan-Chr6:3698517 Tan11g1708 Tan-Chr11:16748592 1.80E-76 dispersed
Tan09g1560 Tan-Chr9:67489874 Tan11g1708 Tan-Chr11:16748592 1.20E-64 dispersed
Tan11g0560 Tan-Chr11:4903226 Tan11g1708 Tan-Chr11:16748592 5.00E-60 dispersed
Tan11g1708 Tan-Chr11:16748592 Tan02g0075 Tan-Chr2:923557 6.90E-63 dispersed
Tan11g1708 Tan-Chr11:16748592 Tan04g1751 Tan-Chr4:46525028 8.40E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68222 PF00069 Pkinase 1.40E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1708 - - - 0.0