Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1747 ATGAAGAGGGAGCATCATCATCTTCATCCTCGTCCGGAGCCGCCTTCCATGGCTGCCGCCTCTAATGGTGACAGTTATTTGAACACTGGAAAGGCTAAGCTCTGGGAGGAGGAGGCCCAGCTCGACGGAGGAATGGATGAGCTTCTTGCTGTTTTGGGTTACAAGGTTAAGTCGTCGGACATGGCGGAAGTTGCCCAGAAGCTCGAGCAGCTTGAAGAAGCTATGTGTCAAGTTCAGGATACTGGTCTTTCGCATCTAGCTTTCGACACTGTTCATTATAATCCTTCCGATCTGTCGACATGGCTTGAAAGTATGCTCACGGAACTCCATCCGCCGCCTCCCTCGCAGATGGACGATTCGTCGTTTTTAGCTCCGGCGGAATCCTCCACCATCACTTCCATTGATTACGACCCCCAACGGCAAACCAGCAGCCGGATTTTCGAGGAATCTTCTACTTCTGATTACGACCTTAAAGCTATTACGAGCAGCGCGATTTATTCACCGAGAGAGAACAAACGTTTGAAACCCTCGTCCGAGTCGGACTCGGATTTGTTCTCTACCTCGGCGATTGGGGCTTCCGATCCTGCAACTCGCCCCGTAGTCCTCGTCGACTCGCAGGAGAACGGAATTCAACTGGTTCATGCTCTGATGGCCTGCGCCGAAGCCGTACAGCAGAACAATCTGAATCTGGCGGAGGCTCTGGTGAAGCGAATCGGATACTTGGCGGTTTCTCAAGCCGGAGCGATGAGGAAGGTCGCCACGTTCTTCGCCGAAGCATTGGCGCGGCGAATCTACAGGGTCTGCCCTGAGAATCCCCTCGATCATTCAATGTCCGATATGCTTCAGTTGCATTTCTACGAGAGCTGTCCGTATCTGAAATTCGCGCATTTCACAGCGAATCAAGCGATTCTCGAAGCCTTCGAAGGGAAGAAGCGCGTTCACGTAATCGATTTCTCGATGAACCAAGGGATGCAGTGGCCGGCTCTGATTCAAGCCCTAGCACTCCGGCCGAGTGGTCCTCCAGCCTTCCGGCTCACCGGAATCGGCCCTCCGGCACCTGATAACTCCGATTACCTTCAAGAAGTCGGGTGGAAGCTCGCTAAATTAGCAGAAACCATCCATGTGGAGTTCGAATACAGAGGATTTGTCGCGAATAGCTTGGCGGATCTGGATGCGTCGATGCTGGAGCTCCGGCCGAGCGAAGTGGAATCGGTGGTAGTGAACTCGGTGTTCGAGTTACATAAGCTACTGGCTCGGCCGGGCGCCATTGAAAAGGTTCTGTCGGTGGTGAAGCAGATGAAGCCGGAGATCATGACGGTGGTAGAGCAGGAAGCGAACCACAACGGTCCGCTTTTCGTGGACCGGTTCACTGAGTCACTCCATTACTACTCGACTCTTTTTGACTCGTTGGAGGGGTCACCCAACAACCAAGACAAGATCATGTCCGAAATGTACCTTGGAAAGCAAATTTGCAACGTGGTAGCTTGTGAAGGCACGGACCGAGTCGAGCGCCACGAAACCCTGACTCAGTGGCGAACTCGGCTGTCCTCCGCCGGGTTCGAGCCCATCCACCTCGGCTCGAACGCATTCAAACAAGCAAGTATGCTCCTCGCCCTATTCGGTAGCGGAGAAGGATACCGAGTGGAAGAGAACAACGGATCATTAACGCTCGGATGGCACACCCGCCCCCTCATCGCCACCTCCGCCTGGAAACTCGGTAACAACCCGGTGGTAGCTCACTGA 1743 53.93 MKREHHHLHPRPEPPSMAAASNGDSYLNTGKAKLWEEEAQLDGGMDELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQVQDTGLSHLAFDTVHYNPSDLSTWLESMLTELHPPPPSQMDDSSFLAPAESSTITSIDYDPQRQTSSRIFEESSTSDYDLKAITSSAIYSPRENKRLKPSSESDSDLFSTSAIGASDPATRPVVLVDSQENGIQLVHALMACAEAVQQNNLNLAEALVKRIGYLAVSQAGAMRKVATFFAEALARRIYRVCPENPLDHSMSDMLQLHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALIQALALRPSGPPAFRLTGIGPPAPDNSDYLQEVGWKLAKLAETIHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGAIEKVLSVVKQMKPEIMTVVEQEANHNGPLFVDRFTESLHYYSTLFDSLEGSPNNQDKIMSEMYLGKQICNVVACEGTDRVERHETLTQWRTRLSSAGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIATSAWKLGNNPVVAH 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17753713 17756223 - Tan0003689.1 Tan11g1747 768684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1747 580 FunFam DELLA protein GAI 44 109 - -
Tan11g1747 580 Coils Coil 54 74 - -
Tan11g1747 580 Pfam Transcriptional regulator DELLA protein N terminal 46 113 IPR021914 -
Tan11g1747 580 SMART DELLA_2 46 119 - -
Tan11g1747 580 Gene3D - 44 109 IPR038088 -
Tan11g1747 580 ProSiteProfiles GRAS family profile. 203 571 IPR005202 -
Tan11g1747 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 173 570 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009723(PANTHER)|GO:0009737(PANTHER)|GO:0009863(PANTHER)|GO:0009867(PANTHER)|GO:0009938(PANTHER)|GO:0010187(PANTHER)|GO:0042538(PANTHER)|GO:0043565(PANTHER)|GO:2000033(PANTHER)|GO:2000377(PANTHER)
Tan11g1747 580 MobiDBLite consensus disorder prediction 169 190 - -
Tan11g1747 580 MobiDBLite consensus disorder prediction 1 25 - -
Tan11g1747 580 Pfam GRAS domain family 212 571 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1662 Tan-Chr5:46198852 Tan11g1747 Tan-Chr11:17753713 1.30E-37 dispersed
Tan08g2009 Tan-Chr8:72165090 Tan11g1747 Tan-Chr11:17753713 4.60E-47 dispersed
Tan09g1343 Tan-Chr9:65722886 Tan11g1747 Tan-Chr11:17753713 5.60E-124 dispersed
Tan11g1400 Tan-Chr11:12468463 Tan11g1747 Tan-Chr11:17753713 3.10E-200 dispersed
Tan11g1747 Tan-Chr11:17753713 Tan05g0414 Tan-Chr5:2914749 2.70E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28771 PF03514 GRAS 2.50E-136 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1747 K14494 - csv:101204164 1072.0