Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1807 ATGGCGGTTTTACCCATCAACTCATCCAACTTGGATCTCTCCATTTCCATTCCCGGCTTTGCTTCTTCGTCCCCGTCTCGTCCTCTCTTTATGAGAGAATTGGACATGAACCGGTTACCGGAGGCGGGAGCGGCGGAGGAAGAATGGGCGGTGGCACCGAGTGCGGAGGAGGAGGAAGAAGAGAGCTGCATTAATGGATGTAAGCCAAGGAAGAAGCTTCGTCTGTCAAAAGATCAGTCTCGTCTTCTTGAAGAAAGCTTTAGGCTCAACCATACGTTAAACCATAAGCAGAAGGAAGCTTTGGCTATGGAGTTGAAGCTGAAACCAAGGCAAGTTGAAGTATGGTTTCAGAATCGTAGGGCCAGGAGCAAGCTGAAGCAAACTGAGATGGAATGTGAGTATTTGAAGAGATGGTTTGGATCATTGACAGAGCAAAACCGCCGGCTGCGGCGGGAACTAGAGGAGCTGAGGGCCATGAAGGTTGCTCCGCCCTCCGTCGCCTCACCCCACGGCCGACAGCCGCTTGTCCCGGCATCCACTATAACCATGTGTCCCCGATGTGAGCGCGTGACTGCAGCCACTCTAACATCTAGTAAGGCTACAGCCACTGCAATCGCAGCCACTGCAATCGCTACCGTCACCATCGGCGCTGCCTCTGCAATGCCATCGAAAGCGGTTCGGTCCGCCCTCGAATTGCAGCAGCCGTCGAGAGCTTGCTGA 720 53.75 MAVLPINSSNLDLSISIPGFASSSPSRPLFMRELDMNRLPEAGAAEEEWAVAPSAEEEEEESCINGCKPRKKLRLSKDQSRLLEESFRLNHTLNHKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLRRELEELRAMKVAPPSVASPHGRQPLVPASTITMCPRCERVTAATLTSSKATATAIAATAIATVTIGAASAMPSKAVRSALELQQPSRAC 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20164424 20168474 - Tan0008892.1 Tan11g1807 768744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1807 239 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 54 202 IPR050762 -
Tan11g1807 239 ProSitePatterns 'Homeobox' domain signature. 101 124 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Tan11g1807 239 Pfam Homeobox associated leucine zipper 126 160 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Tan11g1807 239 Gene3D - 65 133 - -
Tan11g1807 239 CDD homeodomain 69 127 IPR001356 GO:0003677(InterPro)
Tan11g1807 239 SMART halz 126 169 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Tan11g1807 239 SUPERFAMILY Homeodomain-like 62 127 IPR009057 -
Tan11g1807 239 Pfam Homeodomain 70 124 IPR001356 GO:0003677(InterPro)
Tan11g1807 239 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677(InterPro)
Tan11g1807 239 FunFam Homeobox-leucine zipper protein 18 54 131 - -
Tan11g1807 239 Coils Coil 139 162 - -
Tan11g1807 239 SMART HOX_1 68 130 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1613 Tan-Chr4:28785786 Tan11g1807 Tan-Chr11:20164424 3.70E-65 dispersed
Tan06g0528 Tan-Chr6:4040918 Tan11g1807 Tan-Chr11:20164424 1.70E-33 dispersed
Tan10g0059 Tan-Chr10:933680 Tan11g1807 Tan-Chr11:20164424 7.70E-35 dispersed
Tan10g1877 Tan-Chr10:59614868 Tan11g1807 Tan-Chr11:20164424 3.00E-15 dispersed
Tan11g0610 Tan-Chr11:5408743 Tan11g1807 Tan-Chr11:20164424 1.50E-08 dispersed
Tan11g1807 Tan-Chr11:20164424 Tan03g1718 Tan-Chr3:73128639 6.30E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28777 PF00046 Homeodomain 9.00E-17 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1807 K09338 - csv:101206325 271.937