Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1832 ATGCTTGTGGTGGGTTTGTTTCTCATTCTTCTTTGCTGCTCTGATTGCCTTCTTCTTGTGAGTTCTTTGAATGATGAAGGGTTTGTGCTTTTGTCGCTTAAGCAGTCCATTTCTGAAGACCCAGATGGGGCTTTGAGCAATTGGGATTCTTCTGATGAAACCCCTTGTTCTTGGAATGGCGTTGGTTGTATAGAGGAAATTGTTGTTTCTGTTAGTTTTCCTAAGAAGAATTTGTATGGGTTTCTTCCCTCTGGTCTTGGGGCTCTTTCTAGCCTTCGCCATGTGAATTTGAGGAACAATAGGCTTTTTGGGAGCTTGCCTTTTCAGCTCTTCTCTGCTCAAGGGCTACAGAGTTTGGTTCTTTATGGGAATTCCTTTTCCGGGTCTGTTCCAAATGGGATTGGGAAGCTTAAATTCCTTCAAACTCTGGATTTATCTCAAAATTTCTTTAATGGGTCATTGCCCACTTCAATTATTCAATGCAAGAGACTTAAAACCCTTGATGTTAGTCAGAATAACTTCACTGGTTCACTGCCACATGGGTTTGGAACTAGTTTGAGTTCTTTGGAGAAACTGGATCTTTCATTTAACAGCTTTGATGGTTCTCTTCCTAGTGATTTGGGGAATTTGTCTAGCTTAGAAGGCACTTTTGACTTGTCTCATAATCTTTTTTCTGGTTTAATTCCAGCTAGCCTTGGAAACTTACCTGAAAAGGTTTACATTGATCTCAGCCATAACAATTTGAGTGGTCCAATACCCCAAAATGGTGCTCTGATGAACAGAGGACCCACTGCTTTTATTGGGAATCCTGGGCTCTGTGGTTCCCCATTGAAGAACACATGTTCTTCAGAATCTCTAAATGCAAGCTCACCGTCCTTGCTTCCGTTTCTCCCAGACGATCATTTGCCTGGGATTTCTGGTGACAATGCTGAGAAAGCCAGGGGTTTAAGTAAGAGTGCTGTGATTGCAATAGTACTTGGTGATGTGATTGGCATATGTCTAGTTGGGTTATTGTTCTCATATTGTTATTCTAAAGTGTGCAATCCAAGAAAGAGAAAAGATGATAGCGGGCGTAGTTCCGATAAGGGGAAAGGAAGGAATGAGTGTTTATGCTTCAGGAAGGATGAATCCGAAACGGTTTCGCAGAATGTGGAGCAGTACGATCTTGTGCCTTTGGATGCACAAGTTGAATTTGATCTTGATGAACTTCTCAAGGCATCAGCATTTGTTCTTGGCAAAAGTGGGATTGGGATAGTGTACAAAGTGGTGCTTGAGGATGGAGTTGCGTTGGCCGTGCGACGATTAGGCGAAGGCGGTTCTCAAAGGTTCAAAGAATTTCAAACAGAAGTAGAAGCAATAGCAAAGCTAAGGCATCCTAATCTTGTCACTCTTAGAGCCTATTACTGGTCTGTTGATGAGAAGCTGATCATCTATGATTTCATACCCAATGGAAACCTTGCCACTGCCATTCATGGAAAGCCAGGAATGGTAGCTTTCACACCGTTATCCTGGTCTGCGAGGTTAAGGATCATGGAAGGAATTGCAAAAGGAATGGTCTATCTCCATGAATTCAGCCCTAAGAAGTATGTTCATGGAGATTTAAAACCAAACAACATACTTCTCAGTCAGAACATGGAAGCAAAAATTTCTGACTTCGGCCTCGCTCGACTTGCCAACATTGCAGGAGGAACCCCAACCTTACAATCAAGTCGAGTGGCATCCGAGAAACCATTAGATCCAAAGCAACCAAAAACCGTAACATCTGATATCACTTGCAGTTCATCTTCCAACACAGGAACTTATTATCAGGCCCCTGAATCACTCAAAGTCTTGAAACCATCCCAAAAATGGGATGTTTACTCATATGGTGTGATCTTACTAGAAATGATCACTGGAAGATTCCCACTAATTCAAGTGAGTTCTTCCTCTGAAATGGATCTTGTCCATTGGATCCTACTCTGCATTGAAGAACAAAAGCCACTTTCAGAAGTCATAGATCCATGTCTGGTTCAAGATGCAGATAAAGAAGAAGAGATCATCTCTGTACTCAAAATTGCAATGGCTTGTGTCCATGGGAGCCCTGAAAGGAGACCTTCCATGAGACACATCTCGAACGCCCTCGAAAGGGTATCGTCGGCGTCAAGTAATTAA 2151 42.4 MLVVGLFLILLCCSDCLLLVSSLNDEGFVLLSLKQSISEDPDGALSNWDSSDETPCSWNGVGCIEEIVVSVSFPKKNLYGFLPSGLGALSSLRHVNLRNNRLFGSLPFQLFSAQGLQSLVLYGNSFSGSVPNGIGKLKFLQTLDLSQNFFNGSLPTSIIQCKRLKTLDVSQNNFTGSLPHGFGTSLSSLEKLDLSFNSFDGSLPSDLGNLSSLEGTFDLSHNLFSGLIPASLGNLPEKVYIDLSHNNLSGPIPQNGALMNRGPTAFIGNPGLCGSPLKNTCSSESLNASSPSLLPFLPDDHLPGISGDNAEKARGLSKSAVIAIVLGDVIGICLVGLLFSYCYSKVCNPRKRKDDSGRSSDKGKGRNECLCFRKDESETVSQNVEQYDLVPLDAQVEFDLDELLKASAFVLGKSGIGIVYKVVLEDGVALAVRRLGEGGSQRFKEFQTEVEAIAKLRHPNLVTLRAYYWSVDEKLIIYDFIPNGNLATAIHGKPGMVAFTPLSWSARLRIMEGIAKGMVYLHEFSPKKYVHGDLKPNNILLSQNMEAKISDFGLARLANIAGGTPTLQSSRVASEKPLDPKQPKTVTSDITCSSSSNTGTYYQAPESLKVLKPSQKWDVYSYGVILLEMITGRFPLIQVSSSSEMDLVHWILLCIEEQKPLSEVIDPCLVQDADKEEEIISVLKIAMACVHGSPERRPSMRHISNALERVSSASSN 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21409204 21411980 + Tan0007416.1 Tan11g1832 768769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1832 716 MobiDBLite consensus disorder prediction 567 591 - -
Tan11g1832 716 SMART serkin_6 410 680 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1832 716 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Tan11g1832 716 Gene3D Ribonuclease Inhibitor 183 269 IPR032675 -
Tan11g1832 716 FunFam Leucine-rich repeat receptor-like protein kinase 388 480 - -
Tan11g1832 716 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Tan11g1832 716 PANTHER OS05G0588300 PROTEIN 160 712 IPR050994 -
Tan11g1832 716 Pfam Protein kinase domain 411 704 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1832 716 CDD STKc_IRAK 411 709 - -
Tan11g1832 716 Gene3D Transferase(Phosphotransferase) domain 1 481 716 - -
Tan11g1832 716 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Tan11g1832 716 Pfam Leucine Rich Repeat 140 160 IPR001611 GO:0005515(InterPro)
Tan11g1832 716 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515(InterPro)
Tan11g1832 716 Pfam Leucine Rich Repeat 163 183 IPR001611 GO:0005515(InterPro)
Tan11g1832 716 Pfam Leucine Rich Repeat 217 235 IPR001611 GO:0005515(InterPro)
Tan11g1832 716 FunFam Leucine-rich repeat receptor-like protein kinase 23 180 - -
Tan11g1832 716 FunFam Os07g0541700 protein 482 574 - -
Tan11g1832 716 SUPERFAMILY L domain-like 24 278 - -
Tan11g1832 716 Gene3D Phosphorylase Kinase; domain 1 372 480 - -
Tan11g1832 716 SUPERFAMILY Protein kinase-like (PK-like) 410 707 IPR011009 -
Tan11g1832 716 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Tan11g1832 716 SMART LRR_typ_2 89 113 IPR003591 -
Tan11g1832 716 SMART LRR_typ_2 186 210 IPR003591 -
Tan11g1832 716 SMART LRR_typ_2 137 161 IPR003591 -
Tan11g1832 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1832 716 ProSiteProfiles Protein kinase domain profile. 405 710 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1568 Tan-Chr5:34985424 Tan11g1832 Tan-Chr11:21409204 3.40E-82 dispersed
Tan11g1423 Tan-Chr11:12810938 Tan11g1832 Tan-Chr11:21409204 4.10E-49 dispersed
Tan11g1832 Tan-Chr11:21409204 Tan03g1548 Tan-Chr3:71788868 3.10E-45 dispersed
Tan03g0324 Tan-Chr3:47240675 Tan11g1832 Tan-Chr11:21409204 1.70E-74 transposed
Tan04g0068 Tan-Chr4:543116 Tan11g1832 Tan-Chr11:21409204 4.70E-110 transposed
Tan04g0814 Tan-Chr4:6926194 Tan11g1832 Tan-Chr11:21409204 9.00E-210 transposed
Tan11g0109 Tan-Chr11:1163367 Tan11g1832 Tan-Chr11:21409204 1.50E-134 transposed
Tan11g1832 Tan-Chr11:21409204 Tan04g0825 Tan-Chr4:7019190 6.90E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68226 PF00069 Pkinase 1.80E-34 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1832 - - - 0.0