Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1839 ATGAGTGGCGGTGGCAGTGGCAGTAGCACTGGCGCTTCTCGGAGCACCAGGGATTTGATCTGCCACGCCGGTGCCGGTGCTGCTGCAGGTACTATAGCAGCCACGTTCGTCTGCCCTTTGGATGTGATCAAGACGAGGCTGCAAGTGCATGGTATTCCATCTGGTCAAAGAGGAGGTAGTATTATTATCACTAGCCTACAAGACATAATGCGTTCTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAGTAGTAGCACTTCTTCCAAACTGGGCTGTCTACTTCACAGTTTATGAGCATCTAAAAGGCCTACTTCATTCAGATGGGGACTATGGGCATCAACTCTCATTTGGGGAAAATATGGTTGTTGCTGCTGGTGCTGGGGCATCTACTGCCATTGCAACAAATCCTTTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGTATGGTTTCAGCATTTACCAGGATCATACAGGAAGAAGGAATCCGTGGGCTTTACAGTGGTATCATCCCTTCGTTGGTTGGGATAAGTCATGTTGCAATTCAATTTCCTGCTTACGAAAGGCTCAAATCGTATATGGCAGAAAGAGATAACACAACCGTTGAAAAGCTAAGTCCAGGACATTTAGCTATTGCCTCCTCGTTGTCGAAAATTACGGCCTCGGTGACAACTTACCCTCATGAGGTAGTTCGTTCCCGGCTGCAAGAGCAAGGCCAAGCCAGAAACGTTGCTCCACAATACTCAGGAGTAATGGACTGTATCAAAAAGGTTTTCCAAAAGGAAGGTCTCCCCGGTTTTTACAGGGGTTGTGCGACGAATCTGTTCCGAACAACTCCGTCTGCTGTAATAACTTTCACCAGCTATGAGATGATACATAGGTTCCTCCTGCAAGTTATTCCTCCAGGCAAGGAGACATATTCCGAAACTCATCTGAATCCCCAAAAGGCGAACAGAGACAACTCAAAGGAAGATAGCGATTCCAGCATACAACAATCACAATCCCAACCAAGTAAGCAAACTAGAATTCCTCTGGGGAACAAAGAACAGTTAACATCTAGACATTGA 1104 46.92 MSGGGSGSSTGASRSTRDLICHAGAGAAAGTIAATFVCPLDVIKTRLQVHGIPSGQRGGSIIITSLQDIMRSEGFRGMYRGLSPTVVALLPNWAVYFTVYEHLKGLLHSDGDYGHQLSFGENMVVAAGAGASTAIATNPLWVVKTRLQTQGMRPGVVPYTGMVSAFTRIIQEEGIRGLYSGIIPSLVGISHVAIQFPAYERLKSYMAERDNTTVEKLSPGHLAIASSLSKITASVTTYPHEVVRSRLQEQGQARNVAPQYSGVMDCIKKVFQKEGLPGFYRGCATNLFRTTPSAVITFTSYEMIHRFLLQVIPPGKETYSETHLNPQKANRDNSKEDSDSSIQQSQSQPSKQTRIPLGNKEQLTSRH 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21700513 21705096 - Tan0002751.1 Tan11g1839 768776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1839 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 205 IPR018108 -
Tan11g1839 367 MobiDBLite consensus disorder prediction 318 367 - -
Tan11g1839 367 Gene3D Mitochondrial carrier domain 6 112 IPR023395 -
Tan11g1839 367 Gene3D Mitochondrial carrier domain 113 312 IPR023395 -
Tan11g1839 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 307 IPR018108 -
Tan11g1839 367 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 321 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro)
Tan11g1839 367 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 18 308 - -
Tan11g1839 367 Pfam Mitochondrial carrier protein 20 109 IPR018108 -
Tan11g1839 367 Pfam Mitochondrial carrier protein 116 208 IPR018108 -
Tan11g1839 367 Pfam Mitochondrial carrier protein 217 309 IPR018108 -
Tan11g1839 367 MobiDBLite consensus disorder prediction 339 367 - -
Tan11g1839 367 SUPERFAMILY Mitochondrial carrier 17 303 IPR023395 -
Tan11g1839 367 PRINTS Mitochondrial carrier protein signature 22 35 IPR002067 GO:0055085(InterPro)
Tan11g1839 367 PRINTS Mitochondrial carrier protein signature 226 248 IPR002067 GO:0055085(InterPro)
Tan11g1839 367 PRINTS Mitochondrial carrier protein signature 132 150 IPR002067 GO:0055085(InterPro)
Tan11g1839 367 PRINTS Mitochondrial carrier protein signature 35 49 IPR002067 GO:0055085(InterPro)
Tan11g1839 367 PRINTS Mitochondrial carrier protein signature 81 101 IPR002067 GO:0055085(InterPro)
Tan11g1839 367 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085(InterPro)
Tan11g1839 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 106 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2033 Tan-Chr3:75329368 Tan11g1839 Tan-Chr11:21700513 1.70E-48 dispersed
Tan06g0765 Tan-Chr6:6047772 Tan11g1839 Tan-Chr11:21700513 7.80E-118 dispersed
Tan07g0051 Tan-Chr7:2617801 Tan11g1839 Tan-Chr11:21700513 7.60E-11 dispersed
Tan11g1839 Tan-Chr11:21700513 Tan10g0167 Tan-Chr10:1783344 5.00E-07 dispersed
Tan11g1839 Tan-Chr11:21700513 Tan01g3660 Tan-Chr1:101475475 5.50E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1839 K15115 - csv:101216902 614.764