Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1839 | ATGAGTGGCGGTGGCAGTGGCAGTAGCACTGGCGCTTCTCGGAGCACCAGGGATTTGATCTGCCACGCCGGTGCCGGTGCTGCTGCAGGTACTATAGCAGCCACGTTCGTCTGCCCTTTGGATGTGATCAAGACGAGGCTGCAAGTGCATGGTATTCCATCTGGTCAAAGAGGAGGTAGTATTATTATCACTAGCCTACAAGACATAATGCGTTCTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAGTAGTAGCACTTCTTCCAAACTGGGCTGTCTACTTCACAGTTTATGAGCATCTAAAAGGCCTACTTCATTCAGATGGGGACTATGGGCATCAACTCTCATTTGGGGAAAATATGGTTGTTGCTGCTGGTGCTGGGGCATCTACTGCCATTGCAACAAATCCTTTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGTATGGTTTCAGCATTTACCAGGATCATACAGGAAGAAGGAATCCGTGGGCTTTACAGTGGTATCATCCCTTCGTTGGTTGGGATAAGTCATGTTGCAATTCAATTTCCTGCTTACGAAAGGCTCAAATCGTATATGGCAGAAAGAGATAACACAACCGTTGAAAAGCTAAGTCCAGGACATTTAGCTATTGCCTCCTCGTTGTCGAAAATTACGGCCTCGGTGACAACTTACCCTCATGAGGTAGTTCGTTCCCGGCTGCAAGAGCAAGGCCAAGCCAGAAACGTTGCTCCACAATACTCAGGAGTAATGGACTGTATCAAAAAGGTTTTCCAAAAGGAAGGTCTCCCCGGTTTTTACAGGGGTTGTGCGACGAATCTGTTCCGAACAACTCCGTCTGCTGTAATAACTTTCACCAGCTATGAGATGATACATAGGTTCCTCCTGCAAGTTATTCCTCCAGGCAAGGAGACATATTCCGAAACTCATCTGAATCCCCAAAAGGCGAACAGAGACAACTCAAAGGAAGATAGCGATTCCAGCATACAACAATCACAATCCCAACCAAGTAAGCAAACTAGAATTCCTCTGGGGAACAAAGAACAGTTAACATCTAGACATTGA | 1104 | 46.92 | MSGGGSGSSTGASRSTRDLICHAGAGAAAGTIAATFVCPLDVIKTRLQVHGIPSGQRGGSIIITSLQDIMRSEGFRGMYRGLSPTVVALLPNWAVYFTVYEHLKGLLHSDGDYGHQLSFGENMVVAAGAGASTAIATNPLWVVKTRLQTQGMRPGVVPYTGMVSAFTRIIQEEGIRGLYSGIIPSLVGISHVAIQFPAYERLKSYMAERDNTTVEKLSPGHLAIASSLSKITASVTTYPHEVVRSRLQEQGQARNVAPQYSGVMDCIKKVFQKEGLPGFYRGCATNLFRTTPSAVITFTSYEMIHRFLLQVIPPGKETYSETHLNPQKANRDNSKEDSDSSIQQSQSQPSKQTRIPLGNKEQLTSRH | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21700513 | 21705096 | - | Tan0002751.1 | Tan11g1839 | 768776 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1839 | 367 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 117 | 205 | IPR018108 | - | |
Tan11g1839 | 367 | MobiDBLite | consensus disorder prediction | 318 | 367 | - | - | |
Tan11g1839 | 367 | Gene3D | Mitochondrial carrier domain | 6 | 112 | IPR023395 | - | |
Tan11g1839 | 367 | Gene3D | Mitochondrial carrier domain | 113 | 312 | IPR023395 | - | |
Tan11g1839 | 367 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 217 | 307 | IPR018108 | - | |
Tan11g1839 | 367 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 13 | 321 | IPR044712 | GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro) | |
Tan11g1839 | 367 | FunFam | Nicotinamide adenine dinucleotide transporter 2, mitochondrial | 18 | 308 | - | - | |
Tan11g1839 | 367 | Pfam | Mitochondrial carrier protein | 20 | 109 | IPR018108 | - | |
Tan11g1839 | 367 | Pfam | Mitochondrial carrier protein | 116 | 208 | IPR018108 | - | |
Tan11g1839 | 367 | Pfam | Mitochondrial carrier protein | 217 | 309 | IPR018108 | - | |
Tan11g1839 | 367 | MobiDBLite | consensus disorder prediction | 339 | 367 | - | - | |
Tan11g1839 | 367 | SUPERFAMILY | Mitochondrial carrier | 17 | 303 | IPR023395 | - | |
Tan11g1839 | 367 | PRINTS | Mitochondrial carrier protein signature | 22 | 35 | IPR002067 | GO:0055085(InterPro) | |
Tan11g1839 | 367 | PRINTS | Mitochondrial carrier protein signature | 226 | 248 | IPR002067 | GO:0055085(InterPro) | |
Tan11g1839 | 367 | PRINTS | Mitochondrial carrier protein signature | 132 | 150 | IPR002067 | GO:0055085(InterPro) | |
Tan11g1839 | 367 | PRINTS | Mitochondrial carrier protein signature | 35 | 49 | IPR002067 | GO:0055085(InterPro) | |
Tan11g1839 | 367 | PRINTS | Mitochondrial carrier protein signature | 81 | 101 | IPR002067 | GO:0055085(InterPro) | |
Tan11g1839 | 367 | PRINTS | Mitochondrial carrier protein signature | 179 | 197 | IPR002067 | GO:0055085(InterPro) | |
Tan11g1839 | 367 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 17 | 106 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2033 | Tan-Chr3:75329368 | Tan11g1839 | Tan-Chr11:21700513 | 1.70E-48 | dispersed | |
Tan06g0765 | Tan-Chr6:6047772 | Tan11g1839 | Tan-Chr11:21700513 | 7.80E-118 | dispersed | |
Tan07g0051 | Tan-Chr7:2617801 | Tan11g1839 | Tan-Chr11:21700513 | 7.60E-11 | dispersed | |
Tan11g1839 | Tan-Chr11:21700513 | Tan10g0167 | Tan-Chr10:1783344 | 5.00E-07 | dispersed | |
Tan11g1839 | Tan-Chr11:21700513 | Tan01g3660 | Tan-Chr1:101475475 | 5.50E-30 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1839 | K15115 | - | csv:101216902 | 614.764 |