Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1842 ATGTCCCTCCTCAGTAGATTCTTTTACAGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCCACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCATGAAATCATAAACGAATTACATGAAGAATTCCCAGAGTCCTCCTTCCTTGCATTTAATTTCCGTGAAGGAGAGAAAAGGAGCCAATTTGCAGAAATGTTGTGCTTGTATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGTTGCCCTCTTCTTCCATTGTCTTTAATACAGCACTTCCTACGTGTTTGTGAAGATTGGCTTCTGCTTGGTAACCAACAAAATATCATTCTTCTTCACTGCGAGAGGGGAGGTTGGCCACTCTTAGCATTTCTTTTGGCTAGCTTTTTGATATTTAGAAAATTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCGCCTGAGCGAGCACTTTCCTTAGATTGTGTAATTCTTCGTGGCGTTCCGGGTTTTGATTCTCAAAATGGCTGCAGACCAGTTATTCGTATTTTTGGGAGAAATCTTTTCAGTAAGGGTGGACTTTCCACACAGATGATTTTCTCCATGCCCAAGAAGAACAAGGCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGATGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACTAGAAAGAGAAGTTATGATGTTTCGTATTATGTTCAATACGGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGACTCAAAGGAACGTTATCCGAAAGGCTTTCGAGCTGAGGTTTTGTTTGGGGAGATAGAAAGCATCTCCCCTCCAAGGGTTCCAACCACAATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAATGATGGTGCTGCCTTGTGGCTATTCAAGAATCTCTCTGCCTTGAGTGACGTGAAAGAATTGTCAAGATTACAAAATAAAACAAGCTCATACTCCTCGCCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTATTTGATAGTATAACAAAGCCTTTAGTTGATTCAACTTCTGCCAATTTTACAATTCCAGCGATGATACATTCTTCCGAATTATTGTCTGGCAAGATCGGTGCTAATGAAGTGAATATTTCATCGGAGTCTCCTCAAACTTTTGATGAATATCAAGCTGAGATTTTTTTGAATAAAGAATCTCAGCCCTATTCATCACCTCCACTAACTTCTTATGGCTCCTCACCCCCTCCTGGAAGTTCTTTAATGCCATCGCCATGGTTGCCTCCTTCTAATCTACCATCTACTAATGTTAGTGGGGAACTTGTCTCAAACAAAATGACACCCACGGTTAAAGTGATTCCTCCTCCGCCACCACCGCCGCCACCGCCTTTTTCTTCATCTCATAATGAACCTCATGTAAGAACTTTCATGAGTTCAGACTTGACCTCCATAACAATGCATGGGATACCTTCTCCACCCCAAGATCCTACCAATAACGATCCTGTTACGGTCTCTTTGACTCCTTCACTTTCGCTTGTTCCTAAATCTTCTAGTGCTCCTCCACCCCAACCTCCGCCTCCGCCTCTAGTTCCAAAATCTTTTGGTGCTCCTTCGCCTCCAGCTCCAAAGTCTTTTGGTGTTCCTCCACCTCCACCTCCATTTCCTGTTTCAAAACCTTCTAGTGCTCCTCCACCTCCTCCTCCGCCTCCTATTTCGAAATCTTCTAGTGCTCTTCCTCCTCCTATTTCAAAATCTTCTGGTGCTCCTCCACCTCCACCACCTCCTCCTCCTCCGCTTTCAACTTCGAAATCTTCTAGTGCTCCTCCACCTCCACCTCCTCCTCCGCCTTCAATTTTGAAATCTTCTAGTGCTCCTCCACCTCCTCCCCCGCCTTCAATTTCAAAATCTTCTGGTGCTCCTCCACCTCCACCTCCACCACCTATTCCAAAGTCTTCTAGTGCACCTCCACCTCCACCTCCTCTTCCAAAGTCTTCTAGTGCTCCTCCACCTCCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGTGACACCAATCCCACCTCCTCCACCAAAACCTCCCGGTGTTGAGCTACCAAGTCATGGTACTAAACCAAATAGGCCTCCTCCACCTCCTCCACCAACAAAGCCTTTCAATGCTCATCCTCCGACAAGTCATGGTGCTACACCAATGCCACCCCCTCCCCCCGGATCAAGAGGGTCAAATGGACCACCACCACCCCCTCCTTCGGCTGGAAGAGGGAAAGCTTCTCTAGGATCAACAACTCAAGGAAGAGGTCGAGTTGCTACTGGAATTGTAAATGCTCCAAAGAAAACCACTTTAAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCCGCCTCTGCGTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAACATCAACAAACCTGAAAAAGTGCAGCTGATTGACTTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATCCAGGTGACAAAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGTTAATGAAGGTCCCACGAATAGAGTCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCAAGTCAGGTGAATGATTTGAGATATAATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGAAAAATTGCGTCAGATAATGCAAACAATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCTGCTATAGGTTTTAAGTTGGACAGCCTTCTTAAATTGTCTGATACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCCTTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAAGACCTTGTTCATTTAGAAGCTGCTTCTAAGATTCAATTGAAAGCATTGGCTGAAGAAATGCAAGCAGTGAGTAAAGGTCTGGAAAAAGTGGAGCAAGAGCTAACTGCTTCAGAAAATGACGGTGCTATCTCTGTTGGTTTTCAGAAGGTGCTGAAGAATTTTCTTGATACTGCTGAAGCTGAAGTAAGGGCACTTATCTCCTTATATTCTGAAGTGGGGAGAAATGCAGATTCATTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTCTTTGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCTGATGCTGAAAAGAAAAAAATAGAGAAGGAAGCCATGAAAGAACGAAGTTCAGTTAAAGCGAAGTGA 3813 43.3 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPESSFLAFNFREGEKRSQFAEMLCLYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCEDWLLLGNQQNIILLHCERGGWPLLAFLLASFLIFRKLHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGVPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMIFSMPKKNKALRHYRQADCDVIKIDVQCLVQGDVVLECSHLESELEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEIESISPPRVPTTILNGEEKGGLPIEAFSRVQELFSGVEWIDSNDGAALWLFKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDSITKPLVDSTSANFTIPAMIHSSELLSGKIGANEVNISSESPQTFDEYQAEIFLNKESQPYSSPPLTSYGSSPPPGSSLMPSPWLPPSNLPSTNVSGELVSNKMTPTVKVIPPPPPPPPPPFSSSHNEPHVRTFMSSDLTSITMHGIPSPPQDPTNNDPVTVSLTPSLSLVPKSSSAPPPQPPPPPLVPKSFGAPSPPAPKSFGVPPPPPPFPVSKPSSAPPPPPPPPISKSSSALPPPISKSSGAPPPPPPPPPPLSTSKSSSAPPPPPPPPPSILKSSSAPPPPPPPSISKSSGAPPPPPPPPIPKSSSAPPPPPPLPKSSSAPPPPPPPPLPQSNRGVTPIPPPPPKPPGVELPSHGTKPNRPPPPPPPTKPFNAHPPTSHGATPMPPPPPGSRGSNGPPPPPPSAGRGKASLGSTTQGRGRVATGIVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYPGDKEMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVNDLRYNLNTINDATREVKESEKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISVGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADAEKKKIEKEAMKERSSVKAK 1270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21780683 21795359 + Tan0013779.2 Tan11g1842 768779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1842 1270 SUPERFAMILY Formin homology 2 domain (FH2 domain) 877 1258 - -
Tan11g1842 1270 Pfam Formin Homology 2 Domain 869 1239 IPR015425 -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 502 523 - -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 407 432 - -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 608 669 - -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 494 869 - -
Tan11g1842 1270 Gene3D Formin, FH2 domain 866 1250 IPR042201 -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 1241 1270 - -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 917 937 - -
Tan11g1842 1270 SMART it6_source 504 1270 IPR015425 -
Tan11g1842 1270 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Tan11g1842 1270 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 21 187 IPR029021 -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 676 845 - -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 561 607 - -
Tan11g1842 1270 Coils Coil 1239 1262 - -
Tan11g1842 1270 Gene3D - 197 342 - -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 543 560 - -
Tan11g1842 1270 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Tan11g1842 1270 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Tan11g1842 1270 FunFam Formin-like protein 864 1250 - -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 917 931 - -
Tan11g1842 1270 SMART PTEN_C2_2 198 338 IPR014020 -
Tan11g1842 1270 ProSiteProfiles Formin homology-2 (FH2) domain profile. 864 1264 IPR015425 -
Tan11g1842 1270 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Tan11g1842 1270 PANTHER FORMIN-J 780 1262 IPR051144 -
Tan11g1842 1270 MobiDBLite consensus disorder prediction 524 538 - -
Tan11g1842 1270 Coils Coil 1145 1172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1841 Tan-Chr11:21780683 Tan11g1842 Tan-Chr11:21780683 0.00E+00 tandem
Tan11g1842 Tan-Chr11:21780683 Tan11g1843 Tan-Chr11:21780683 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1842 K28090 - csv:101217517 1007.28