Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1842 | ATGTCCCTCCTCAGTAGATTCTTTTACAGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCCACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCATGAAATCATAAACGAATTACATGAAGAATTCCCAGAGTCCTCCTTCCTTGCATTTAATTTCCGTGAAGGAGAGAAAAGGAGCCAATTTGCAGAAATGTTGTGCTTGTATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGTTGCCCTCTTCTTCCATTGTCTTTAATACAGCACTTCCTACGTGTTTGTGAAGATTGGCTTCTGCTTGGTAACCAACAAAATATCATTCTTCTTCACTGCGAGAGGGGAGGTTGGCCACTCTTAGCATTTCTTTTGGCTAGCTTTTTGATATTTAGAAAATTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCGCCTGAGCGAGCACTTTCCTTAGATTGTGTAATTCTTCGTGGCGTTCCGGGTTTTGATTCTCAAAATGGCTGCAGACCAGTTATTCGTATTTTTGGGAGAAATCTTTTCAGTAAGGGTGGACTTTCCACACAGATGATTTTCTCCATGCCCAAGAAGAACAAGGCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGATGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACTAGAAAGAGAAGTTATGATGTTTCGTATTATGTTCAATACGGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGACTCAAAGGAACGTTATCCGAAAGGCTTTCGAGCTGAGGTTTTGTTTGGGGAGATAGAAAGCATCTCCCCTCCAAGGGTTCCAACCACAATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAATGATGGTGCTGCCTTGTGGCTATTCAAGAATCTCTCTGCCTTGAGTGACGTGAAAGAATTGTCAAGATTACAAAATAAAACAAGCTCATACTCCTCGCCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTATTTGATAGTATAACAAAGCCTTTAGTTGATTCAACTTCTGCCAATTTTACAATTCCAGCGATGATACATTCTTCCGAATTATTGTCTGGCAAGATCGGTGCTAATGAAGTGAATATTTCATCGGAGTCTCCTCAAACTTTTGATGAATATCAAGCTGAGATTTTTTTGAATAAAGAATCTCAGCCCTATTCATCACCTCCACTAACTTCTTATGGCTCCTCACCCCCTCCTGGAAGTTCTTTAATGCCATCGCCATGGTTGCCTCCTTCTAATCTACCATCTACTAATGTTAGTGGGGAACTTGTCTCAAACAAAATGACACCCACGGTTAAAGTGATTCCTCCTCCGCCACCACCGCCGCCACCGCCTTTTTCTTCATCTCATAATGAACCTCATGTAAGAACTTTCATGAGTTCAGACTTGACCTCCATAACAATGCATGGGATACCTTCTCCACCCCAAGATCCTACCAATAACGATCCTGTTACGGTCTCTTTGACTCCTTCACTTTCGCTTGTTCCTAAATCTTCTAGTGCTCCTCCACCCCAACCTCCGCCTCCGCCTCTAGTTCCAAAATCTTTTGGTGCTCCTTCGCCTCCAGCTCCAAAGTCTTTTGGTGTTCCTCCACCTCCACCTCCATTTCCTGTTTCAAAACCTTCTAGTGCTCCTCCACCTCCTCCTCCGCCTCCTATTTCGAAATCTTCTAGTGCTCTTCCTCCTCCTATTTCAAAATCTTCTGGTGCTCCTCCACCTCCACCACCTCCTCCTCCTCCGCTTTCAACTTCGAAATCTTCTAGTGCTCCTCCACCTCCACCTCCTCCTCCGCCTTCAATTTTGAAATCTTCTAGTGCTCCTCCACCTCCTCCCCCGCCTTCAATTTCAAAATCTTCTGGTGCTCCTCCACCTCCACCTCCACCACCTATTCCAAAGTCTTCTAGTGCACCTCCACCTCCACCTCCTCTTCCAAAGTCTTCTAGTGCTCCTCCACCTCCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGTGACACCAATCCCACCTCCTCCACCAAAACCTCCCGGTGTTGAGCTACCAAGTCATGGTACTAAACCAAATAGGCCTCCTCCACCTCCTCCACCAACAAAGCCTTTCAATGCTCATCCTCCGACAAGTCATGGTGCTACACCAATGCCACCCCCTCCCCCCGGATCAAGAGGGTCAAATGGACCACCACCACCCCCTCCTTCGGCTGGAAGAGGGAAAGCTTCTCTAGGATCAACAACTCAAGGAAGAGGTCGAGTTGCTACTGGAATTGTAAATGCTCCAAAGAAAACCACTTTAAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCCGCCTCTGCGTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAACATCAACAAACCTGAAAAAGTGCAGCTGATTGACTTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATCCAGGTGACAAAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGTTAATGAAGGTCCCACGAATAGAGTCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCAAGTCAGGTGAATGATTTGAGATATAATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGAAAAATTGCGTCAGATAATGCAAACAATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCTGCTATAGGTTTTAAGTTGGACAGCCTTCTTAAATTGTCTGATACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCCTTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAAGACCTTGTTCATTTAGAAGCTGCTTCTAAGATTCAATTGAAAGCATTGGCTGAAGAAATGCAAGCAGTGAGTAAAGGTCTGGAAAAAGTGGAGCAAGAGCTAACTGCTTCAGAAAATGACGGTGCTATCTCTGTTGGTTTTCAGAAGGTGCTGAAGAATTTTCTTGATACTGCTGAAGCTGAAGTAAGGGCACTTATCTCCTTATATTCTGAAGTGGGGAGAAATGCAGATTCATTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTCTTTGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCTGATGCTGAAAAGAAAAAAATAGAGAAGGAAGCCATGAAAGAACGAAGTTCAGTTAAAGCGAAGTGA | 3813 | 43.3 | MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPESSFLAFNFREGEKRSQFAEMLCLYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCEDWLLLGNQQNIILLHCERGGWPLLAFLLASFLIFRKLHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGVPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMIFSMPKKNKALRHYRQADCDVIKIDVQCLVQGDVVLECSHLESELEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEIESISPPRVPTTILNGEEKGGLPIEAFSRVQELFSGVEWIDSNDGAALWLFKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDSITKPLVDSTSANFTIPAMIHSSELLSGKIGANEVNISSESPQTFDEYQAEIFLNKESQPYSSPPLTSYGSSPPPGSSLMPSPWLPPSNLPSTNVSGELVSNKMTPTVKVIPPPPPPPPPPFSSSHNEPHVRTFMSSDLTSITMHGIPSPPQDPTNNDPVTVSLTPSLSLVPKSSSAPPPQPPPPPLVPKSFGAPSPPAPKSFGVPPPPPPFPVSKPSSAPPPPPPPPISKSSSALPPPISKSSGAPPPPPPPPPPLSTSKSSSAPPPPPPPPPSILKSSSAPPPPPPPSISKSSGAPPPPPPPPIPKSSSAPPPPPPLPKSSSAPPPPPPPPLPQSNRGVTPIPPPPPKPPGVELPSHGTKPNRPPPPPPPTKPFNAHPPTSHGATPMPPPPPGSRGSNGPPPPPPSAGRGKASLGSTTQGRGRVATGIVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYPGDKEMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVNDLRYNLNTINDATREVKESEKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISVGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADAEKKKIEKEAMKERSSVKAK | 1270 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21780683 | 21795359 | + | Tan0013779.2 | Tan11g1842 | 768779 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1842 | 1270 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 877 | 1258 | - | - | |
Tan11g1842 | 1270 | Pfam | Formin Homology 2 Domain | 869 | 1239 | IPR015425 | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 502 | 523 | - | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 407 | 432 | - | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 608 | 669 | - | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 494 | 869 | - | - | |
Tan11g1842 | 1270 | Gene3D | Formin, FH2 domain | 866 | 1250 | IPR042201 | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 1241 | 1270 | - | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 917 | 937 | - | - | |
Tan11g1842 | 1270 | SMART | it6_source | 504 | 1270 | IPR015425 | - | |
Tan11g1842 | 1270 | Pfam | C2 domain of PTEN tumour-suppressor protein | 198 | 338 | IPR014020 | - | |
Tan11g1842 | 1270 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 21 | 187 | IPR029021 | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 676 | 845 | - | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 561 | 607 | - | - | |
Tan11g1842 | 1270 | Coils | Coil | 1239 | 1262 | - | - | |
Tan11g1842 | 1270 | Gene3D | - | 197 | 342 | - | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 543 | 560 | - | - | |
Tan11g1842 | 1270 | Gene3D | Protein tyrosine phosphatase superfamily | 16 | 191 | IPR029021 | - | |
Tan11g1842 | 1270 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 200 | 339 | IPR035892 | - | |
Tan11g1842 | 1270 | FunFam | Formin-like protein | 864 | 1250 | - | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 917 | 931 | - | - | |
Tan11g1842 | 1270 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
Tan11g1842 | 1270 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 864 | 1264 | IPR015425 | - | |
Tan11g1842 | 1270 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Tan11g1842 | 1270 | PANTHER | FORMIN-J | 780 | 1262 | IPR051144 | - | |
Tan11g1842 | 1270 | MobiDBLite | consensus disorder prediction | 524 | 538 | - | - | |
Tan11g1842 | 1270 | Coils | Coil | 1145 | 1172 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g1841 | Tan-Chr11:21780683 | Tan11g1842 | Tan-Chr11:21780683 | 0.00E+00 | tandem | |
Tan11g1842 | Tan-Chr11:21780683 | Tan11g1843 | Tan-Chr11:21780683 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1842 | K28090 | - | csv:101217517 | 1007.28 |