Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1867 | ATGATTTACTCCGACAAAATGCAAGAAATTGCATCCAAAATGGGCTTCACTCTCTCCGATTTCTCCGACACTTTGGAACAAGAACGCCGTAAAGTCCTCATGTTTCAGCGCGAGCTTCCTCTCTGTTTAGAGCTCGTTACCTATGCCATTGATTGTTGTAGGCAGCAGCTCTCGGAGACGACCACGGAGAATCGTCAATCGGAGTGTTCAGAGCAGACTTCCAGTGAGATGGGTCCGGTTCTTGAGGAGTTCATTCCGATTAACAGAAATGGGGTTTCTGATTTTGAGCAACAGCAGTCTCGTGAAACTCAAACGGAGAAGAATGACGACTCCGATCGAAACAATTTGAATTTGTTTCCGTCGGATTGGCTCAGATCTGCTCAGCTTTGGAATCAGACTTCAGATCCTCCTCCTCTGCATCAGGACTTGCCGGAGAAGACGGCCGTTGTTGAGGTCAAGAGAAATGGCGGTGCTTTCCGGCCGTTTCAGAAGGAGAAACCCGGTGGCGGAGGTGGAGGGACGTCGTCGTCTTCGGCTCCGGCTCCGGCGGCGGCGACGAGCTCGACGGCGGAGACCGGGTCCGACGGAAGCAATCGACGGGAAGAGAAAGAAGCGCAGAATCAAAGGAAACAGAGAAGGTGCTGGTCGCCGGAGTTGCACCGGCGATTCCTTCATGCGCTTCAACAGCTCGGAGGTTCCCATGTGGCGACGCCGAAGCAAATCAGAGAATTGATGAAGGTCGATGGTCTTACCAACGACGAAGTGAAAAGTCATTTACAGAAATATCGTCTACACACGAGACGGCCAAGTCCGACGATGCACAACAACGACAGCGCCCAGGCGCCGCAGTTCCTGGTGGTGGGCGGCATATGGGTACCGGCGGCCGAGTACGCCACCACTTCCTCCGGTGAAGCAGTCAGCGCAGCCACCACTAACGGAATTTACGCACCGGTGGTTGCGGCGGCGGCGCCGCAGCCATTACTCAGTTCAGTCCAAAAGCCGAAGCCGAAGCCGAAGCCCAAGGTTGCTTCCGCCGATTGTATTTCTCCTAGTACATCTTCCTCCACTCATACGTCTTCAGTTTCACCTCCCTCTTGA | 1098 | 53.92 | MIYSDKMQEIASKMGFTLSDFSDTLEQERRKVLMFQRELPLCLELVTYAIDCCRQQLSETTTENRQSECSEQTSSEMGPVLEEFIPINRNGVSDFEQQQSRETQTEKNDDSDRNNLNLFPSDWLRSAQLWNQTSDPPPLHQDLPEKTAVVEVKRNGGAFRPFQKEKPGGGGGGTSSSSAPAPAAATSSTAETGSDGSNRREEKEAQNQRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPTMHNNDSAQAPQFLVVGGIWVPAAEYATTSSGEAVSAATTNGIYAPVVAAAAPQPLLSSVQKPKPKPKPKVASADCISPSTSSSTHTSSVSPPS | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 24114385 | 24117404 | + | Tan0020598.1 | Tan11g1867 | 768804 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 329 | 365 | - | - | |
Tan11g1867 | 365 | FunFam | Myb family transcription factor | 209 | 267 | - | - | |
Tan11g1867 | 365 | Pfam | Myb-like DNA-binding domain | 212 | 263 | IPR001005 | - | |
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 60 | 77 | - | - | |
Tan11g1867 | 365 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 210 | 265 | IPR006447 | GO:0003677(InterPro) | |
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 170 | 194 | - | - | |
Tan11g1867 | 365 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 207 | 267 | IPR017930 | - | |
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 158 | 214 | - | - | |
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 94 | 118 | - | - | |
Tan11g1867 | 365 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 12 | 325 | IPR044787 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1867 | 365 | SUPERFAMILY | Homeodomain-like | 208 | 268 | IPR009057 | - | |
Tan11g1867 | 365 | Gene3D | - | 209 | 267 | - | - | |
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 346 | 365 | - | - | |
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 195 | 214 | - | - | |
Tan11g1867 | 365 | MobiDBLite | consensus disorder prediction | 60 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0199 | Tan-Chr8:1793984 | Tan11g1867 | Tan-Chr11:24114385 | 1.10E-41 | dispersed | |
Tan09g1338 | Tan-Chr9:65679477 | Tan11g1867 | Tan-Chr11:24114385 | 3.40E-40 | dispersed | |
Tan10g1521 | Tan-Chr10:23426252 | Tan11g1867 | Tan-Chr11:24114385 | 6.10E-11 | dispersed | |
Tan11g1867 | Tan-Chr11:24114385 | Tan04g0896 | Tan-Chr4:7666739 | 1.80E-65 | wgd | |
Tan11g1867 | Tan-Chr11:24114385 | Tan08g1295 | Tan-Chr8:45121274 | 2.80E-10 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28783 | PF00249 | Myb_DNA-binding | 1.60E-06 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1867 | - | - | - | 0.0 |