Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1867 ATGATTTACTCCGACAAAATGCAAGAAATTGCATCCAAAATGGGCTTCACTCTCTCCGATTTCTCCGACACTTTGGAACAAGAACGCCGTAAAGTCCTCATGTTTCAGCGCGAGCTTCCTCTCTGTTTAGAGCTCGTTACCTATGCCATTGATTGTTGTAGGCAGCAGCTCTCGGAGACGACCACGGAGAATCGTCAATCGGAGTGTTCAGAGCAGACTTCCAGTGAGATGGGTCCGGTTCTTGAGGAGTTCATTCCGATTAACAGAAATGGGGTTTCTGATTTTGAGCAACAGCAGTCTCGTGAAACTCAAACGGAGAAGAATGACGACTCCGATCGAAACAATTTGAATTTGTTTCCGTCGGATTGGCTCAGATCTGCTCAGCTTTGGAATCAGACTTCAGATCCTCCTCCTCTGCATCAGGACTTGCCGGAGAAGACGGCCGTTGTTGAGGTCAAGAGAAATGGCGGTGCTTTCCGGCCGTTTCAGAAGGAGAAACCCGGTGGCGGAGGTGGAGGGACGTCGTCGTCTTCGGCTCCGGCTCCGGCGGCGGCGACGAGCTCGACGGCGGAGACCGGGTCCGACGGAAGCAATCGACGGGAAGAGAAAGAAGCGCAGAATCAAAGGAAACAGAGAAGGTGCTGGTCGCCGGAGTTGCACCGGCGATTCCTTCATGCGCTTCAACAGCTCGGAGGTTCCCATGTGGCGACGCCGAAGCAAATCAGAGAATTGATGAAGGTCGATGGTCTTACCAACGACGAAGTGAAAAGTCATTTACAGAAATATCGTCTACACACGAGACGGCCAAGTCCGACGATGCACAACAACGACAGCGCCCAGGCGCCGCAGTTCCTGGTGGTGGGCGGCATATGGGTACCGGCGGCCGAGTACGCCACCACTTCCTCCGGTGAAGCAGTCAGCGCAGCCACCACTAACGGAATTTACGCACCGGTGGTTGCGGCGGCGGCGCCGCAGCCATTACTCAGTTCAGTCCAAAAGCCGAAGCCGAAGCCGAAGCCCAAGGTTGCTTCCGCCGATTGTATTTCTCCTAGTACATCTTCCTCCACTCATACGTCTTCAGTTTCACCTCCCTCTTGA 1098 53.92 MIYSDKMQEIASKMGFTLSDFSDTLEQERRKVLMFQRELPLCLELVTYAIDCCRQQLSETTTENRQSECSEQTSSEMGPVLEEFIPINRNGVSDFEQQQSRETQTEKNDDSDRNNLNLFPSDWLRSAQLWNQTSDPPPLHQDLPEKTAVVEVKRNGGAFRPFQKEKPGGGGGGTSSSSAPAPAAATSSTAETGSDGSNRREEKEAQNQRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPTMHNNDSAQAPQFLVVGGIWVPAAEYATTSSGEAVSAATTNGIYAPVVAAAAPQPLLSSVQKPKPKPKPKVASADCISPSTSSSTHTSSVSPPS 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24114385 24117404 + Tan0020598.1 Tan11g1867 768804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1867 365 MobiDBLite consensus disorder prediction 329 365 - -
Tan11g1867 365 FunFam Myb family transcription factor 209 267 - -
Tan11g1867 365 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
Tan11g1867 365 MobiDBLite consensus disorder prediction 60 77 - -
Tan11g1867 365 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 265 IPR006447 GO:0003677(InterPro)
Tan11g1867 365 MobiDBLite consensus disorder prediction 170 194 - -
Tan11g1867 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 267 IPR017930 -
Tan11g1867 365 MobiDBLite consensus disorder prediction 158 214 - -
Tan11g1867 365 MobiDBLite consensus disorder prediction 94 118 - -
Tan11g1867 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 325 IPR044787 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1867 365 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Tan11g1867 365 Gene3D - 209 267 - -
Tan11g1867 365 MobiDBLite consensus disorder prediction 346 365 - -
Tan11g1867 365 MobiDBLite consensus disorder prediction 195 214 - -
Tan11g1867 365 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0199 Tan-Chr8:1793984 Tan11g1867 Tan-Chr11:24114385 1.10E-41 dispersed
Tan09g1338 Tan-Chr9:65679477 Tan11g1867 Tan-Chr11:24114385 3.40E-40 dispersed
Tan10g1521 Tan-Chr10:23426252 Tan11g1867 Tan-Chr11:24114385 6.10E-11 dispersed
Tan11g1867 Tan-Chr11:24114385 Tan04g0896 Tan-Chr4:7666739 1.80E-65 wgd
Tan11g1867 Tan-Chr11:24114385 Tan08g1295 Tan-Chr8:45121274 2.80E-10 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28783 PF00249 Myb_DNA-binding 1.60E-06 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1867 - - - 0.0