Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1871 | ATGCAGAGCTTTGAAAACCCAGAACAGCTCTATGCTCATTCTTCTTCTTCTTCCATCTTTCTCCGTGGAGACGACAGTGGGCGAATCCATACGCGGTTTCTTCCGGATATTGAGGAGCTTCAACAATCCGCTGCTGCTATTGCTGCTTTTCATCACGATGATGCTGTTGATTTAAGCCCAAGCTCTGTTTTCAGTTTAAAATCGACCCACAACGCAGCTTTTCCCATCCACCTACCGTACGCGAGCACGGATGTGGGTTCAATAGGAACAGGGTATTTAGACACGGGACAGCAATTGATGAGGTTGAAGAGGCTGGCTCCGCCGCAGACGGCGGCAGTGACGGTGGCGGCTGCGTCATCGTTGGGAAACGGGAGCTTTGAGAACTGGGGCGAGTCAGCCATGGCAGATAATAGCCAGCAGACTGACACTTCCACAGACATCGACACTGATGAAAGAAACCAGTTTCAGGGAGCTGTTCATGGAGCTCTCATGGCGGTGGACTCCATGGAACAATCAAAACCAAAATCTGCAGATCAGAAGACTCTTCGTAGGCTTGCTCAGAATCGAGAAGCAGCCAGGAAGAGTCGGCTGAGGAAGAAAGCATATGTCCAGCAGCTGGAAAATAGTCGACAGAGGCTTACGCAGCTAGAGCAGGAGCTACATCGAGCACGCCAACAGGGCATTTTTGTGGCTTCTGGGGCAGGAGACCATTGTTTATCCATGACAGGAAATGGTGCCTTGGCATTTGATCTCGACTATGGACGGTGGCTTGACGAGCATCAACGACTGATCAATGATTTGAGAGCATCTACAAATTCTCAGCTGGGCGATGACGAATTGCGATTTCTTGTTGATGGGGTGATGGCACATTATGATGAACTCTTCAGGCTAAAGAGCGTAGGCGCTAAGGCCGACGTTTTCCACATTCTTTCTGGCATGTGGAAGACTCCTGCTGAGAGGTGTTTCATGTGGCTGGGAGGATTCCGTTCGTCCGAACTTCTAAAGATAGTTGGGAACCATTTGGAGCCTTTAACGGATCAGCAGTTGATGGGCATATGCAATTTGCAGCAATCTTCCCAACAAGCTGAAGATGCATTGTCACAAGGGATTGAAGCTTTGCAACAGTCTCTTGTAGAAACTCTTTCCACTGCTTCTTTAGGTCCTGCTAGTTCGGGAAATGTCGCCGATTACATGGGCCAAATGGCGATCGCAATGAGCAAGCTAACGACGCTCGAGAACTTCCTCCATCAGGCTGATCTTCTGAGGCAGCAAACGCTACAACAGATGCATCGGATATTAACTACTCGCCAAGCTGCACGAGCGCTTCTTGTCATCAGCGATTACGTTTCACGTCTTCGAGCTCTCAGTTCTCTGTGGTTAGCACGACCAAAAGACTGA | 1398 | 49.43 | MQSFENPEQLYAHSSSSSIFLRGDDSGRIHTRFLPDIEELQQSAAAIAAFHHDDAVDLSPSSVFSLKSTHNAAFPIHLPYASTDVGSIGTGYLDTGQQLMRLKRLAPPQTAAVTVAAASSLGNGSFENWGESAMADNSQQTDTSTDIDTDERNQFQGAVHGALMAVDSMEQSKPKSADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLTQLEQELHRARQQGIFVASGAGDHCLSMTGNGALAFDLDYGRWLDEHQRLINDLRASTNSQLGDDELRFLVDGVMAHYDELFRLKSVGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGIEALQQSLVETLSTASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYVSRLRALSSLWLARPKD | 465 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 24285573 | 24289047 | + | Tan0002664.1 | Tan11g1871 | 768808 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1871 | 465 | Pfam | Seed dormancy control | 264 | 337 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan11g1871 | 465 | SMART | brlzneu | 176 | 247 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1871 | 465 | Pfam | bZIP transcription factor | 179 | 220 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1871 | 465 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 183 | 198 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1871 | 465 | Gene3D | - | 179 | 228 | - | - | |
Tan11g1871 | 465 | FunFam | BZIP family transcription factor | 179 | 228 | - | - | |
Tan11g1871 | 465 | SUPERFAMILY | Leucine zipper domain | 180 | 223 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1871 | 465 | MobiDBLite | consensus disorder prediction | 127 | 144 | - | - | |
Tan11g1871 | 465 | CDD | bZIP_HBP1b-like | 180 | 232 | - | - | |
Tan11g1871 | 465 | Coils | Coil | 199 | 226 | - | - | |
Tan11g1871 | 465 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 178 | 222 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1871 | 465 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 136 | 465 | - | - | |
Tan11g1871 | 465 | ProSiteProfiles | DOG1 domain profile. | 246 | 462 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan11g1871 | 465 | MobiDBLite | consensus disorder prediction | 127 | 148 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0515 | Tan-Chr4:4258311 | Tan11g1871 | Tan-Chr11:24285573 | 7.50E-117 | dispersed | |
Tan04g0516 | Tan-Chr4:4258311 | Tan11g1871 | Tan-Chr11:24285573 | 4.60E-116 | dispersed | |
Tan08g1270 | Tan-Chr8:41773700 | Tan11g1871 | Tan-Chr11:24285573 | 2.10E-44 | dispersed | |
Tan11g0078 | Tan-Chr11:915203 | Tan11g1871 | Tan-Chr11:24285573 | 8.90E-56 | dispersed | |
Tan11g0079 | Tan-Chr11:915203 | Tan11g1871 | Tan-Chr11:24285573 | 4.00E-71 | dispersed | |
Tan11g1871 | Tan-Chr11:24285573 | Tan11g1873 | Tan-Chr11:24285573 | 4.90E-241 | dispersed | |
Tan11g1871 | Tan-Chr11:24285573 | Tan11g1872 | Tan-Chr11:24285573 | 3.20E-200 | tandem | |
Tan08g1467 | Tan-Chr8:60396535 | Tan11g1871 | Tan-Chr11:24285573 | 3.30E-94 | transposed | |
Tan11g1871 | Tan-Chr11:24285573 | Tan08g1264 | Tan-Chr8:41075118 | 5.40E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28784 | PF14144 | DOG1 | 1.30E-29 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1871 | K14431 | - | csv:101210308 | 827.009 |