Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1871 ATGCAGAGCTTTGAAAACCCAGAACAGCTCTATGCTCATTCTTCTTCTTCTTCCATCTTTCTCCGTGGAGACGACAGTGGGCGAATCCATACGCGGTTTCTTCCGGATATTGAGGAGCTTCAACAATCCGCTGCTGCTATTGCTGCTTTTCATCACGATGATGCTGTTGATTTAAGCCCAAGCTCTGTTTTCAGTTTAAAATCGACCCACAACGCAGCTTTTCCCATCCACCTACCGTACGCGAGCACGGATGTGGGTTCAATAGGAACAGGGTATTTAGACACGGGACAGCAATTGATGAGGTTGAAGAGGCTGGCTCCGCCGCAGACGGCGGCAGTGACGGTGGCGGCTGCGTCATCGTTGGGAAACGGGAGCTTTGAGAACTGGGGCGAGTCAGCCATGGCAGATAATAGCCAGCAGACTGACACTTCCACAGACATCGACACTGATGAAAGAAACCAGTTTCAGGGAGCTGTTCATGGAGCTCTCATGGCGGTGGACTCCATGGAACAATCAAAACCAAAATCTGCAGATCAGAAGACTCTTCGTAGGCTTGCTCAGAATCGAGAAGCAGCCAGGAAGAGTCGGCTGAGGAAGAAAGCATATGTCCAGCAGCTGGAAAATAGTCGACAGAGGCTTACGCAGCTAGAGCAGGAGCTACATCGAGCACGCCAACAGGGCATTTTTGTGGCTTCTGGGGCAGGAGACCATTGTTTATCCATGACAGGAAATGGTGCCTTGGCATTTGATCTCGACTATGGACGGTGGCTTGACGAGCATCAACGACTGATCAATGATTTGAGAGCATCTACAAATTCTCAGCTGGGCGATGACGAATTGCGATTTCTTGTTGATGGGGTGATGGCACATTATGATGAACTCTTCAGGCTAAAGAGCGTAGGCGCTAAGGCCGACGTTTTCCACATTCTTTCTGGCATGTGGAAGACTCCTGCTGAGAGGTGTTTCATGTGGCTGGGAGGATTCCGTTCGTCCGAACTTCTAAAGATAGTTGGGAACCATTTGGAGCCTTTAACGGATCAGCAGTTGATGGGCATATGCAATTTGCAGCAATCTTCCCAACAAGCTGAAGATGCATTGTCACAAGGGATTGAAGCTTTGCAACAGTCTCTTGTAGAAACTCTTTCCACTGCTTCTTTAGGTCCTGCTAGTTCGGGAAATGTCGCCGATTACATGGGCCAAATGGCGATCGCAATGAGCAAGCTAACGACGCTCGAGAACTTCCTCCATCAGGCTGATCTTCTGAGGCAGCAAACGCTACAACAGATGCATCGGATATTAACTACTCGCCAAGCTGCACGAGCGCTTCTTGTCATCAGCGATTACGTTTCACGTCTTCGAGCTCTCAGTTCTCTGTGGTTAGCACGACCAAAAGACTGA 1398 49.43 MQSFENPEQLYAHSSSSSIFLRGDDSGRIHTRFLPDIEELQQSAAAIAAFHHDDAVDLSPSSVFSLKSTHNAAFPIHLPYASTDVGSIGTGYLDTGQQLMRLKRLAPPQTAAVTVAAASSLGNGSFENWGESAMADNSQQTDTSTDIDTDERNQFQGAVHGALMAVDSMEQSKPKSADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLTQLEQELHRARQQGIFVASGAGDHCLSMTGNGALAFDLDYGRWLDEHQRLINDLRASTNSQLGDDELRFLVDGVMAHYDELFRLKSVGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGIEALQQSLVETLSTASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYVSRLRALSSLWLARPKD 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24285573 24289047 + Tan0002664.1 Tan11g1871 768808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1871 465 Pfam Seed dormancy control 264 337 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan11g1871 465 SMART brlzneu 176 247 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1871 465 Pfam bZIP transcription factor 179 220 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1871 465 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1871 465 Gene3D - 179 228 - -
Tan11g1871 465 FunFam BZIP family transcription factor 179 228 - -
Tan11g1871 465 SUPERFAMILY Leucine zipper domain 180 223 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1871 465 MobiDBLite consensus disorder prediction 127 144 - -
Tan11g1871 465 CDD bZIP_HBP1b-like 180 232 - -
Tan11g1871 465 Coils Coil 199 226 - -
Tan11g1871 465 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 222 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1871 465 PANTHER TRANSCRIPTION FACTOR TGA9 136 465 - -
Tan11g1871 465 ProSiteProfiles DOG1 domain profile. 246 462 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan11g1871 465 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0515 Tan-Chr4:4258311 Tan11g1871 Tan-Chr11:24285573 7.50E-117 dispersed
Tan04g0516 Tan-Chr4:4258311 Tan11g1871 Tan-Chr11:24285573 4.60E-116 dispersed
Tan08g1270 Tan-Chr8:41773700 Tan11g1871 Tan-Chr11:24285573 2.10E-44 dispersed
Tan11g0078 Tan-Chr11:915203 Tan11g1871 Tan-Chr11:24285573 8.90E-56 dispersed
Tan11g0079 Tan-Chr11:915203 Tan11g1871 Tan-Chr11:24285573 4.00E-71 dispersed
Tan11g1871 Tan-Chr11:24285573 Tan11g1873 Tan-Chr11:24285573 4.90E-241 dispersed
Tan11g1871 Tan-Chr11:24285573 Tan11g1872 Tan-Chr11:24285573 3.20E-200 tandem
Tan08g1467 Tan-Chr8:60396535 Tan11g1871 Tan-Chr11:24285573 3.30E-94 transposed
Tan11g1871 Tan-Chr11:24285573 Tan08g1264 Tan-Chr8:41075118 5.40E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28784 PF14144 DOG1 1.30E-29 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1871 K14431 - csv:101210308 827.009