Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1872 | ATGAGGTTGAAGAGGCTGGCTCCGCCGCAGACGGCGGCAGTGACGGTGGCGGCTGCGTCATCGTTGGGAAACGGGAGCTTTGAGAACTGGGGCGAGTCAGCCATGGCAGATAATAGCCAGCAGACTGACACTTCCACAGACATCGACACTGATGAAAGAAACCAGTTTCAGGGAGCTGTTCATGGAGCTCTCATGGCGGTGGACTCCATGGAACAATCAAAACCAAAATCTGCAGATCAGAAGACTCTTCGTAGGCTTGCTCAGAATCGAGAAGCAGCCAGGAAGAGTCGGCTGAGGAAGAAAGCATATGTCCAGCAGCTGGAAAATAGTCGACAGAGGCTTACGCAGCTAGAGCAGGAGCTACATCGAGCACGCCAACAGGGCATTTTTGTGGCTTCTGGGGCAGGAGACCATTGTTTATCCATGACAGGAAATGGTGCCTTGGCATTTGATCTCGACTATGGACGGTGGCTTGACGAGCATCAACGACTGATCAATGATTTGAGAGCATCTACAAATTCTCAGCTGGGCGATGACGAATTGCGATTTCTTGTTGATGGGGTGATGGCACATTATGATGAACTCTTCAGGCTAAAGAGCGTAGGCGCTAAGGCCGACGTTTTCCACATTCTTTCTGGCATGTGGAAGACTCCTGCTGAGAGGTGTTTCATGTGGCTGGGAGGATTCCGTTCGTCCGAACTTCTAAAGATAGTTGGGAACCATTTGGAGCCTTTAACGGATCAGCAGTTGATGGGCATATGCAATTTGCAGCAATCTTCCCAACAAGCTGAAGATGCATTGTCACAAGGGATTGAAGCTTTGCAACAGTCTCTTGTAGAAACTCTTTCCACTGCTTCTTTAGGTCCTGCTAGTTCGGGAAATGTCGCCGATTACATGGGCCAAATGGCGATCGCAATGAGCAAGCTAACGACGCTCGAGAACTTCCTCCATCAGGCTGATCTTCTGAGGCAGCAAACGCTACAACAGATGCATCGGATATTAACTACTCGCCAAGCTGCACGAGCGCTTCTTGTCATCAGCGATTACGTTTCACGTCTTCGAGCTCTCAGTTCTCTGTGGTTAGCACGACCAAAAGACTGA | 1101 | 49.95 | MRLKRLAPPQTAAVTVAAASSLGNGSFENWGESAMADNSQQTDTSTDIDTDERNQFQGAVHGALMAVDSMEQSKPKSADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLTQLEQELHRARQQGIFVASGAGDHCLSMTGNGALAFDLDYGRWLDEHQRLINDLRASTNSQLGDDELRFLVDGVMAHYDELFRLKSVGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGIEALQQSLVETLSTASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYVSRLRALSSLWLARPKD | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 24285573 | 24289047 | + | Tan0002664.2 | Tan11g1872 | 768809 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1872 | 366 | Gene3D | - | 80 | 129 | - | - | |
Tan11g1872 | 366 | ProSiteProfiles | DOG1 domain profile. | 147 | 363 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan11g1872 | 366 | SUPERFAMILY | Leucine zipper domain | 81 | 124 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1872 | 366 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 79 | 123 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1872 | 366 | FunFam | BZIP family transcription factor | 80 | 129 | - | - | |
Tan11g1872 | 366 | SMART | brlzneu | 77 | 148 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1872 | 366 | Pfam | Seed dormancy control | 165 | 238 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan11g1872 | 366 | Pfam | bZIP transcription factor | 80 | 121 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1872 | 366 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 84 | 99 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1872 | 366 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 38 | 366 | - | - | |
Tan11g1872 | 366 | Coils | Coil | 100 | 127 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g1264 | Tan-Chr8:41075118 | Tan11g1872 | Tan-Chr11:24285573 | 7.60E-95 | dispersed | |
Tan08g1467 | Tan-Chr8:60396535 | Tan11g1872 | Tan-Chr11:24285573 | 3.30E-94 | dispersed | |
Tan11g1872 | Tan-Chr11:24285573 | Tan11g1874 | Tan-Chr11:24285573 | 6.90E-182 | dispersed | |
Tan11g1871 | Tan-Chr11:24285573 | Tan11g1872 | Tan-Chr11:24285573 | 3.20E-200 | tandem | |
Tan11g1872 | Tan-Chr11:24285573 | Tan11g1873 | Tan-Chr11:24285573 | 6.90E-182 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28785 | PF14144 | DOG1 | 9.00E-30 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1872 | K14431 | - | csv:101210308 | 660.603 |