Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1931 | ATGGAGGCAAGCTCTTTGGACGAAAGTACCGCCAGTGACTCCACTTCTATTTCTCCTGTCACCCCATTACTCTTCAACTCATCTCCTTCGCCGTCGCTTCCGCCGGCCGACGCTGAATCCCGAAAGCTTCCTTCTTCCCGTTTCAAAGGAGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAAAAGCATCAAAGGGTCTGGCTCGGCACATTCAACGAAGAACACGACGCTGCTAAAGCCTACGACATCGCCGCCCTCCGCTTCCGCGGCCGTGACGCCGTCACCAACTTCAAACCCGACGCCGCCTCCACCACCGTCGACGCCGCTCTCGAAGCCGACTTTCTCAAATCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGCTCCAGCAGAGCAAGCGACACCGCGGTGCCACGGCGACGGCGAATACGGCGGCGGCATCCTCTCTCCACCACTCCGGCTCCGATCGCGGATCGGAGTCGGATCTCCGGGAGGTTCTGTTCGAGAAAACCGTGACGCCGAGCGACGTGGGGAAATTGAACCGGCTGGTGATTCCGAAACAGCACGCGGAGAAAAACTTTCCGTTGGGAGACGGCGTCGTTTCGGTAGCGAAAGGAATGCTTCTAAACTTCGAGGATATGGGAGGGAAAGTATGGCGGTTCCGGTACTCGTATTGGAATAGCAGCCAGAGCTATGTGTTGACCAAGGGCTGGAGCCGGTTCGTAAAAGAGAAGAGTCTCCGAGCCGGAGATGTCGTCCGCTTCCTCCGCTCGACCGGACCGGATAAACAGCTTTATATTGATGGAAAACCGGCAGGGGTGAACCCGGTTCATGTGGTGAAGCTTTTTGGAGTCAATATTTTGGAACAACCGGTGGGTTGTTGTGGGAAGAGAGAGAGAGAAGGGTTGTTGGATTTACAAGGGACCAAAAAGCAAAGAATAATCAAAGCTTTGTAA | 990 | 55.45 | MEASSLDESTASDSTSISPVTPLLFNSSPSPSLPPADAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPDAASTTVDAALEADFLKSHSKLEIVDMLRKHTYNDELQQSKRHRGATATANTAAASSLHHSGSDRGSESDLREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGDGVVSVAKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLRAGDVVRFLRSTGPDKQLYIDGKPAGVNPVHVVKLFGVNILEQPVGCCGKREREGLLDLQGTKKQRIIKAL | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29672929 | 29674620 | - | Tan0008750.1 | Tan11g1931 | 768868 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1931 | 329 | Gene3D | - | 167 | 287 | IPR015300 | - | |
Tan11g1931 | 329 | ProSiteProfiles | B3 DNA-binding domain profile. | 179 | 282 | IPR003340 | GO:0003677(InterPro) | |
Tan11g1931 | 329 | SMART | B3_2 | 179 | 282 | IPR003340 | GO:0003677(InterPro) | |
Tan11g1931 | 329 | MobiDBLite | consensus disorder prediction | 139 | 172 | - | - | |
Tan11g1931 | 329 | CDD | AP2 | 46 | 104 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1931 | 329 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Tan11g1931 | 329 | Gene3D | AP2/ERF domain | 46 | 103 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1931 | 329 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 46 | 283 | IPR044800 | GO:0003700(InterPro) | |
Tan11g1931 | 329 | Pfam | B3 DNA binding domain | 179 | 269 | IPR003340 | GO:0003677(InterPro) | |
Tan11g1931 | 329 | MobiDBLite | consensus disorder prediction | 146 | 165 | - | - | |
Tan11g1931 | 329 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Tan11g1931 | 329 | ProSiteProfiles | AP2/ERF domain profile. | 47 | 102 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1931 | 329 | FunFam | AP2 domain-containing protein RAP2.8 | 46 | 103 | - | - | |
Tan11g1931 | 329 | SMART | rav1_2 | 47 | 108 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1931 | 329 | SUPERFAMILY | DNA-binding domain | 46 | 103 | IPR016177 | GO:0003677(InterPro) | |
Tan11g1931 | 329 | CDD | B3_DNA | 178 | 266 | IPR003340 | GO:0003677(InterPro) | |
Tan11g1931 | 329 | SUPERFAMILY | DNA-binding pseudobarrel domain | 178 | 272 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0897 | Tan-Chr4:7685937 | Tan11g1931 | Tan-Chr11:29672929 | 2.70E-106 | dispersed | |
Tan08g1679 | Tan-Chr8:67117841 | Tan11g1931 | Tan-Chr11:29672929 | 8.20E-34 | dispersed | |
Tan09g0896 | Tan-Chr9:60445322 | Tan11g1931 | Tan-Chr11:29672929 | 3.20E-45 | dispersed | |
Tan09g1552 | Tan-Chr9:67365045 | Tan11g1931 | Tan-Chr11:29672929 | 7.40E-45 | dispersed | |
Tan11g1931 | Tan-Chr11:29672929 | Tan11g1121 | Tan-Chr11:8870214 | 1.10E-10 | dispersed | |
Tan11g1931 | Tan-Chr11:29672929 | Tan06g1845 | Tan-Chr6:44839824 | 6.70E-35 | wgd | |
Tan11g1931 | Tan-Chr11:29672929 | Tan08g1184 | Tan-Chr8:28966042 | 1.10E-08 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28789 | PF02362 | B3 | 1.70E-26 | CL0405 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1931 | K09287 | - | csv:101206328 | 459.529 |