Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1935 | ATGGCTGGTAAAGCTCAAATCCCTACCAAAAGCTCAGCGCTTATTTCTATGATTGCTGATGAGGATACAGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAACGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCAAAGACAACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCTAACATGATCAGGTTTCTGGTCGATAGCTATAACAAGCCAATTCCGGCGATACTGGAGATTCCTTCCAAGGATCACCCATATGACCCTGCACATGATTCAATTCTTTCACGAGTAAAGAACTTGTTTTCTACTGAATCGGTTGCATCTGGGAGGCGTTAA | 393 | 40.46 | MAGKAQIPTKSSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR | 130 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30038567 | 30044266 | + | Tan0015090.1 | Tan11g1935 | 768872 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1935 | 130 | PIRSF | V-ATP_synth_F | 3 | 123 | IPR005772 | GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Tan11g1935 | 130 | Pfam | ATP synthase (F/14-kDa) subunit | 15 | 116 | IPR008218 | GO:0034220(InterPro)|GO:0046961(InterPro) | |
Tan11g1935 | 130 | Gene3D | ATPase, V1 complex, subunit F | 9 | 122 | IPR036906 | GO:0034220(InterPro) | |
Tan11g1935 | 130 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT F | 1 | 126 | - | GO:0016020(PANTHER) | |
Tan11g1935 | 130 | SUPERFAMILY | AtpF-like | 15 | 118 | IPR036906 | GO:0034220(InterPro) | |
Tan11g1935 | 130 | FunFam | V-type proton ATPase subunit F | 9 | 122 | - | - | |
Tan11g1935 | 130 | NCBIfam | V-type ATPase subunit F | 12 | 124 | IPR005772 | GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g1934 | Tan-Chr11:30038434 | Tan11g1935 | Tan-Chr11:30038567 | 3.40E-67 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1935 | K02151 | - | csv:101215239 | 249.595 |