Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1965 | ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGGGTTCTTCCTTTAACTCCAGCAGTGGCAATGATGATACTTTCCTTCAAAACTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGTGATGGCTCCAATTTTGCACCCCCTACTCCTACAACCATATCCATGGCAATTCCGACAGAACTTGCTGGTGTCATACCTTTGATTGACAGATTCCAGGTCGAAGGATTCTTAAGGATGATGCATAAACAGATACATTCTTCTGGAAAACGTGGATTCTTTTCCAAAAGATCTGTAGGTCCTCAAGTTCGGGAAAAATTCACATTTGAGGATATGTTGTGTTTCCAAAAGGATCCTATACCAACTTCCTTACTTAAAATTAACTCTGACCTGGTGAGTCGAGCCATTAAACTATTCCAAATAATCTTGAAGTACATGGGTGTTGACTCTTCTGATAGAGTAAATACAACAAGCTTAGATGAACGAATTGAGCTTGTTGGAAAACTATACAAGCACACTTTGAAACGTTCAGAGCTTCGAGATGAGCTTTTTATCCAAATCTCAAAGCAAACTAGAAATTCTCCTGATAGGCAATATTTGATCAAAGCATGGGAGTTGATGTATCTAGGTGCATCTGCCATGCCTCCTAGCAAGGATATTGGTGGATATCTTTCAGAGTATGTTCATAATGTTGCACAAGGCACTAGTACTGATCCAGAGGTTCGAGTTCTTGCATTAAATACATTGAATGCTTTAAAGCGTTGCATGAAGGCCGGTCCCAGGCATATAATACCTGGTCGTGAGGAAATCGAAGCTCTTCTAACAGGGCGAAAGCTTACAACCATAGTATTTTTTTTGGATGAAACTTTTGAAGAAATCACATACGACATGACAACAACGGTGGCTGATTCTGTTGAGGAACTTTCAGGAATTATAAAACTGTCAGCACACTCTAGCTTCAGTCTTTTTGAGTGCCGTAAGGTTGTCAGTGGGGCTAAAGCACATGATCTAGGAAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTGTTAGCAGAATTCAAGGCAGCAAAAGATCGAAGTAAAGGAGAAATTCTACACTTCAAGCTGACATTTAAAAAGAAGCTATTTCGGGAGTCTGACGAAGCTGTTGCAGACCCAATGTTTATACAGCTATCATATGTTCAGCTGCAGCACGACTATTTGTTGGGGAATTATCCTGTTGGAAGGGATGATGCTGCACAGCTGTCAGCATTACAAATCCTCGTTGAGATTGGGTTTCTTACCAGTCCAGAATCTTGCACTGATTGGAATTCGCTTCTGGAAAGATTTGTACCCAGACAAATTGCCATAACAAGACCAAAGCGAGAGTGGGAGTTGGATATTCTTTCGCGTTTTCGTTCCATGGAGCATCTGACAAAAGATGATGCAAGACAGCAATTTCTCCGGATATTGAGAACACTTCCTTACGGGAATTCAGTTTTCTTTGGCGTCCGCAAGATTGATGATCCCATTGGACTTCTACCTGGGCGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCAAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGCAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTTGCTGGCGTCCTACATATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAGACACACATAAATGATGTCATGTTGCGCCGTTACTCTAAAGCTAGATCTGCTGCTGTTGGCTCCATGCTTGGAGATTCTTCCTGCAATTTTAAGTCTCAAAGTGTGGAAGTGTATGAGAAACGAGTTCATGATTTGAGTAAGGGCATTGAAGAGTCTCAGAGAAATACTGAACAGTTGCTGAAGGAATTGCATGAAAAGAATAAGCAAGAAGTGGTAATGCAAGAAGAATTGGAGACCTTAAAAGAATCCTTGAGATTTGAAAAGCAAAATTTAGCTGAGGCAGCACGTAGTCTCGAGAGGCTCAGATCGCAGTATGATGAAAAAGACAAGGAACACCAGGACATGTTAATGGAAAAAAGGGGTATGGAAGCAAGAATAGACAAGTTGAGCGCCTCAGTGTTGGAAAATAACGTGAAAAAAGATACGGTTGGAATTGATGAACAGCTTCTACATAAACTTCAAGATGAGTTGAGGCTCCGAAATGATGAGTTGCAAGCCACTGAAGAAATTAGAAAGAAACTGGTAAATGAAAAGCTATTGCTGGAACAAAGAATTTTTGGACTTGAAAAGAAGACTCGCAATGAGATGGAACATCTCCAGAAAAGTTTTGAACAAGAACGCAAAGTCTTGAAGCTGAGAGTGGCAGAACTTGAAAAGAAACTTGAAGAAGTAACTCAAGCACTAGCTATCATGGAGTCAACTCTTGCAATCAGGAACTCTGATTTGGCGGCACTGCAAAATAATTTGAAGGAACTAGAGGAACTACGAGAGATGAAAGAGGACATTGACCGAAAAAATGAGCAAACTGCTAATATTTTGAAGATGCAAGGGGCTCAGCTAGCTGAGATGGAAAAACTTTATAAGGAAGAGCAAATTTTAAGGAAACGCTATTTCAACACGATAGAAGATATGAAAGGAAAGATTAGAGTTTACTGTCGACTTAGACCTCTTAATGAGAAAGAAATTACTGAAAAAGAAAAAAAGGTGCTTACAAGTCTAGACGAGTTCACAGTTGAACATCCATGGAAAGATGATAAGCTGAAGCAACATATGTATGATCGTGTATTTGATGGCACTGCCTCCCAGGAAGATGTCTTTGAAGATACGCAGTATCTAGTCCAGTCAGCTGTTGATGGTTATAATGTTTGCATATTTGCTTACGGTCAAACTGGCTCTGGGAAGACATTTACAATATATGGATCTGAGGACCGACCTGGATTAACACCACGTGCCATTGGAGAACTTTTTAGGATTTTGAAGCGGGATAGTAACAAGTTCTCATTTTCATTAAAGGCATACATGGTAGAATTATATCAAGATACATTGGTAGATCTTCTTTTGCCGAAGAGTGCAAAACGATTGAAATTAGATATCAAAAAGGATACAAAGGTAAATATTTCAACGTTCAATCATTAG | 3162 | 39.82 | MTFDMAQSARTMGSSFNSSSGNDDTFLQNFAAASNGDDYDSDGSNFAPPTPTTISMAIPTELAGVIPLIDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYMGVDSSDRVNTTSLDERIELVGKLYKHTLKRSELRDELFIQISKQTRNSPDRQYLIKAWELMYLGASAMPPSKDIGGYLSEYVHNVAQGTSTDPEVRVLALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGIIKLSAHSSFSLFECRKVVSGAKAHDLGNEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFIQLSYVQLQHDYLLGNYPVGRDDAAQLSALQILVEIGFLTSPESCTDWNSLLERFVPRQIAITRPKREWELDILSRFRSMEHLTKDDARQQFLRILRTLPYGNSVFFGVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSMLGDSSCNFKSQSVEVYEKRVHDLSKGIEESQRNTEQLLKELHEKNKQEVVMQEELETLKESLRFEKQNLAEAARSLERLRSQYDEKDKEHQDMLMEKRGMEARIDKLSASVLENNVKKDTVGIDEQLLHKLQDELRLRNDELQATEEIRKKLVNEKLLLEQRIFGLEKKTRNEMEHLQKSFEQERKVLKLRVAELEKKLEEVTQALAIMESTLAIRNSDLAALQNNLKELEELREMKEDIDRKNEQTANILKMQGAQLAEMEKLYKEEQILRKRYFNTIEDMKGKIRVYCRLRPLNEKEITEKEKKVLTSLDEFTVEHPWKDDKLKQHMYDRVFDGTASQEDVFEDTQYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDRPGLTPRAIGELFRILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKSAKRLKLDIKKDTKVNISTFNH | 1053 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33317844 | 33333384 | - | Tan0015102.2 | Tan11g1965 | 768902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1965 | 1053 | Coils | Coil | 732 | 766 | - | - | |
Tan11g1965 | 1053 | CDD | FERM_B-lobe | 394 | 492 | IPR019748 | - | |
Tan11g1965 | 1053 | Pfam | FERM central domain | 384 | 500 | IPR019748 | - | |
Tan11g1965 | 1053 | SMART | MyTH4_1 | 115 | 274 | IPR000857 | GO:0005856(InterPro) | |
Tan11g1965 | 1053 | SMART | kinesin_4 | 887 | 1053 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
Tan11g1965 | 1053 | SMART | B41_5 | 275 | 499 | IPR019749 | - | |
Tan11g1965 | 1053 | Gene3D | - | 391 | 492 | IPR014352 | - | |
Tan11g1965 | 1053 | SUPERFAMILY | Second domain of FERM | 377 | 494 | IPR035963 | - | |
Tan11g1965 | 1053 | Pfam | Microtubule binding | 870 | 1028 | IPR031852 | GO:0008017(InterPro) | |
Tan11g1965 | 1053 | Gene3D | MyTH4 domain | 94 | 276 | IPR038185 | - | |
Tan11g1965 | 1053 | Pfam | PTB domain (IRS-1 type) | 510 | 586 | IPR002404 | - | |
Tan11g1965 | 1053 | ProSiteProfiles | FERM domain profile. | 279 | 593 | IPR000299 | GO:0005856(InterPro) | |
Tan11g1965 | 1053 | Gene3D | - | 497 | 604 | IPR011993 | - | |
Tan11g1965 | 1053 | FunFam | Kinesin-like calmodulin binding protein | 382 | 493 | - | - | |
Tan11g1965 | 1053 | SUPERFAMILY | PH domain-like | 499 | 587 | - | - | |
Tan11g1965 | 1053 | PANTHER | MYOSIN VII, XV | 110 | 589 | IPR051567 | - | |
Tan11g1965 | 1053 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 94 | 276 | - | - | |
Tan11g1965 | 1053 | Coils | Coil | 782 | 854 | - | - | |
Tan11g1965 | 1053 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 278 | 381 | - | - | |
Tan11g1965 | 1053 | Gene3D | - | 278 | 382 | - | - | |
Tan11g1965 | 1053 | Pfam | MyTH4 domain | 168 | 272 | IPR000857 | GO:0005856(InterPro) | |
Tan11g1965 | 1053 | SUPERFAMILY | Prismane protein-like | 832 | 893 | IPR011254 | GO:0003824(InterPro)|GO:0016491(InterPro) | |
Tan11g1965 | 1053 | Coils | Coil | 617 | 700 | - | - | |
Tan11g1965 | 1053 | ProSiteProfiles | Kinesin motor domain profile. | 889 | 1053 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
Tan11g1965 | 1053 | ProSiteProfiles | MyTH4 domain profile. | 115 | 274 | IPR000857 | GO:0005856(InterPro) | |
Tan11g1965 | 1053 | CDD | FERM_C_KCBP | 496 | 602 | - | - | |
Tan11g1965 | 1053 | Gene3D | Kinesin motor domain | 830 | 1052 | IPR036961 | - | |
Tan11g1965 | 1053 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 497 | 605 | - | - | |
Tan11g1965 | 1053 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 889 | 1049 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g1965 | Tan-Chr11:33317844 | Tan08g0557 | Tan-Chr8:5402679 | 1.30E-28 | dispersed | |
Tan11g1964 | Tan-Chr11:33317844 | Tan11g1965 | Tan-Chr11:33317844 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1965 | K27887 | - | csv:101206704 | 1878.22 |