Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1965 ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGGGTTCTTCCTTTAACTCCAGCAGTGGCAATGATGATACTTTCCTTCAAAACTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGTGATGGCTCCAATTTTGCACCCCCTACTCCTACAACCATATCCATGGCAATTCCGACAGAACTTGCTGGTGTCATACCTTTGATTGACAGATTCCAGGTCGAAGGATTCTTAAGGATGATGCATAAACAGATACATTCTTCTGGAAAACGTGGATTCTTTTCCAAAAGATCTGTAGGTCCTCAAGTTCGGGAAAAATTCACATTTGAGGATATGTTGTGTTTCCAAAAGGATCCTATACCAACTTCCTTACTTAAAATTAACTCTGACCTGGTGAGTCGAGCCATTAAACTATTCCAAATAATCTTGAAGTACATGGGTGTTGACTCTTCTGATAGAGTAAATACAACAAGCTTAGATGAACGAATTGAGCTTGTTGGAAAACTATACAAGCACACTTTGAAACGTTCAGAGCTTCGAGATGAGCTTTTTATCCAAATCTCAAAGCAAACTAGAAATTCTCCTGATAGGCAATATTTGATCAAAGCATGGGAGTTGATGTATCTAGGTGCATCTGCCATGCCTCCTAGCAAGGATATTGGTGGATATCTTTCAGAGTATGTTCATAATGTTGCACAAGGCACTAGTACTGATCCAGAGGTTCGAGTTCTTGCATTAAATACATTGAATGCTTTAAAGCGTTGCATGAAGGCCGGTCCCAGGCATATAATACCTGGTCGTGAGGAAATCGAAGCTCTTCTAACAGGGCGAAAGCTTACAACCATAGTATTTTTTTTGGATGAAACTTTTGAAGAAATCACATACGACATGACAACAACGGTGGCTGATTCTGTTGAGGAACTTTCAGGAATTATAAAACTGTCAGCACACTCTAGCTTCAGTCTTTTTGAGTGCCGTAAGGTTGTCAGTGGGGCTAAAGCACATGATCTAGGAAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTGTTAGCAGAATTCAAGGCAGCAAAAGATCGAAGTAAAGGAGAAATTCTACACTTCAAGCTGACATTTAAAAAGAAGCTATTTCGGGAGTCTGACGAAGCTGTTGCAGACCCAATGTTTATACAGCTATCATATGTTCAGCTGCAGCACGACTATTTGTTGGGGAATTATCCTGTTGGAAGGGATGATGCTGCACAGCTGTCAGCATTACAAATCCTCGTTGAGATTGGGTTTCTTACCAGTCCAGAATCTTGCACTGATTGGAATTCGCTTCTGGAAAGATTTGTACCCAGACAAATTGCCATAACAAGACCAAAGCGAGAGTGGGAGTTGGATATTCTTTCGCGTTTTCGTTCCATGGAGCATCTGACAAAAGATGATGCAAGACAGCAATTTCTCCGGATATTGAGAACACTTCCTTACGGGAATTCAGTTTTCTTTGGCGTCCGCAAGATTGATGATCCCATTGGACTTCTACCTGGGCGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCAAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGCAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTTGCTGGCGTCCTACATATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAGACACACATAAATGATGTCATGTTGCGCCGTTACTCTAAAGCTAGATCTGCTGCTGTTGGCTCCATGCTTGGAGATTCTTCCTGCAATTTTAAGTCTCAAAGTGTGGAAGTGTATGAGAAACGAGTTCATGATTTGAGTAAGGGCATTGAAGAGTCTCAGAGAAATACTGAACAGTTGCTGAAGGAATTGCATGAAAAGAATAAGCAAGAAGTGGTAATGCAAGAAGAATTGGAGACCTTAAAAGAATCCTTGAGATTTGAAAAGCAAAATTTAGCTGAGGCAGCACGTAGTCTCGAGAGGCTCAGATCGCAGTATGATGAAAAAGACAAGGAACACCAGGACATGTTAATGGAAAAAAGGGGTATGGAAGCAAGAATAGACAAGTTGAGCGCCTCAGTGTTGGAAAATAACGTGAAAAAAGATACGGTTGGAATTGATGAACAGCTTCTACATAAACTTCAAGATGAGTTGAGGCTCCGAAATGATGAGTTGCAAGCCACTGAAGAAATTAGAAAGAAACTGGTAAATGAAAAGCTATTGCTGGAACAAAGAATTTTTGGACTTGAAAAGAAGACTCGCAATGAGATGGAACATCTCCAGAAAAGTTTTGAACAAGAACGCAAAGTCTTGAAGCTGAGAGTGGCAGAACTTGAAAAGAAACTTGAAGAAGTAACTCAAGCACTAGCTATCATGGAGTCAACTCTTGCAATCAGGAACTCTGATTTGGCGGCACTGCAAAATAATTTGAAGGAACTAGAGGAACTACGAGAGATGAAAGAGGACATTGACCGAAAAAATGAGCAAACTGCTAATATTTTGAAGATGCAAGGGGCTCAGCTAGCTGAGATGGAAAAACTTTATAAGGAAGAGCAAATTTTAAGGAAACGCTATTTCAACACGATAGAAGATATGAAAGGAAAGATTAGAGTTTACTGTCGACTTAGACCTCTTAATGAGAAAGAAATTACTGAAAAAGAAAAAAAGGTGCTTACAAGTCTAGACGAGTTCACAGTTGAACATCCATGGAAAGATGATAAGCTGAAGCAACATATGTATGATCGTGTATTTGATGGCACTGCCTCCCAGGAAGATGTCTTTGAAGATACGCAGTATCTAGTCCAGTCAGCTGTTGATGGTTATAATGTTTGCATATTTGCTTACGGTCAAACTGGCTCTGGGAAGACATTTACAATATATGGATCTGAGGACCGACCTGGATTAACACCACGTGCCATTGGAGAACTTTTTAGGATTTTGAAGCGGGATAGTAACAAGTTCTCATTTTCATTAAAGGCATACATGGTAGAATTATATCAAGATACATTGGTAGATCTTCTTTTGCCGAAGAGTGCAAAACGATTGAAATTAGATATCAAAAAGGATACAAAGGTAAATATTTCAACGTTCAATCATTAG 3162 39.82 MTFDMAQSARTMGSSFNSSSGNDDTFLQNFAAASNGDDYDSDGSNFAPPTPTTISMAIPTELAGVIPLIDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYMGVDSSDRVNTTSLDERIELVGKLYKHTLKRSELRDELFIQISKQTRNSPDRQYLIKAWELMYLGASAMPPSKDIGGYLSEYVHNVAQGTSTDPEVRVLALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGIIKLSAHSSFSLFECRKVVSGAKAHDLGNEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFIQLSYVQLQHDYLLGNYPVGRDDAAQLSALQILVEIGFLTSPESCTDWNSLLERFVPRQIAITRPKREWELDILSRFRSMEHLTKDDARQQFLRILRTLPYGNSVFFGVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSMLGDSSCNFKSQSVEVYEKRVHDLSKGIEESQRNTEQLLKELHEKNKQEVVMQEELETLKESLRFEKQNLAEAARSLERLRSQYDEKDKEHQDMLMEKRGMEARIDKLSASVLENNVKKDTVGIDEQLLHKLQDELRLRNDELQATEEIRKKLVNEKLLLEQRIFGLEKKTRNEMEHLQKSFEQERKVLKLRVAELEKKLEEVTQALAIMESTLAIRNSDLAALQNNLKELEELREMKEDIDRKNEQTANILKMQGAQLAEMEKLYKEEQILRKRYFNTIEDMKGKIRVYCRLRPLNEKEITEKEKKVLTSLDEFTVEHPWKDDKLKQHMYDRVFDGTASQEDVFEDTQYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDRPGLTPRAIGELFRILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKSAKRLKLDIKKDTKVNISTFNH 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33317844 33333384 - Tan0015102.2 Tan11g1965 768902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1965 1053 Coils Coil 732 766 - -
Tan11g1965 1053 CDD FERM_B-lobe 394 492 IPR019748 -
Tan11g1965 1053 Pfam FERM central domain 384 500 IPR019748 -
Tan11g1965 1053 SMART MyTH4_1 115 274 IPR000857 GO:0005856(InterPro)
Tan11g1965 1053 SMART kinesin_4 887 1053 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan11g1965 1053 SMART B41_5 275 499 IPR019749 -
Tan11g1965 1053 Gene3D - 391 492 IPR014352 -
Tan11g1965 1053 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Tan11g1965 1053 Pfam Microtubule binding 870 1028 IPR031852 GO:0008017(InterPro)
Tan11g1965 1053 Gene3D MyTH4 domain 94 276 IPR038185 -
Tan11g1965 1053 Pfam PTB domain (IRS-1 type) 510 586 IPR002404 -
Tan11g1965 1053 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856(InterPro)
Tan11g1965 1053 Gene3D - 497 604 IPR011993 -
Tan11g1965 1053 FunFam Kinesin-like calmodulin binding protein 382 493 - -
Tan11g1965 1053 SUPERFAMILY PH domain-like 499 587 - -
Tan11g1965 1053 PANTHER MYOSIN VII, XV 110 589 IPR051567 -
Tan11g1965 1053 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 94 276 - -
Tan11g1965 1053 Coils Coil 782 854 - -
Tan11g1965 1053 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 278 381 - -
Tan11g1965 1053 Gene3D - 278 382 - -
Tan11g1965 1053 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856(InterPro)
Tan11g1965 1053 SUPERFAMILY Prismane protein-like 832 893 IPR011254 GO:0003824(InterPro)|GO:0016491(InterPro)
Tan11g1965 1053 Coils Coil 617 700 - -
Tan11g1965 1053 ProSiteProfiles Kinesin motor domain profile. 889 1053 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan11g1965 1053 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856(InterPro)
Tan11g1965 1053 CDD FERM_C_KCBP 496 602 - -
Tan11g1965 1053 Gene3D Kinesin motor domain 830 1052 IPR036961 -
Tan11g1965 1053 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 497 605 - -
Tan11g1965 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 1049 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1965 Tan-Chr11:33317844 Tan08g0557 Tan-Chr8:5402679 1.30E-28 dispersed
Tan11g1964 Tan-Chr11:33317844 Tan11g1965 Tan-Chr11:33317844 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1965 K27887 - csv:101206704 1878.22