Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2053 ATGAGGGCTGGGAACCGAAAGAGGAAGCTAAAGCTTAGCAAGATCTATTCATTTGCCTGCGGAAGATCTTCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAATTCCATCAGCTCTACAAAGTACACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGTATTCTAGCCTTCACTCCTCTTGCTCCTTATTCTGCTGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATTGCGACAATGATTAAAGAAGGTATTGAAGATTGGCGACGAAAGGCACAGGATATTGAGGTGAATAATAGAAAGGTTAAAGTACATCAAGGCAATGGAGTTTTCGATTATGCTGAATGGAAAACTTTGAGGGTTGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGATTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAACAATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCACTGGATGTTACTGCATTTGCAAATGAGGATTCTAGCTTCCGTGACTTTAAGGCTACTATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGATTCCAAGGTTATTCAAAATTCTACTGATCCGCCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGTTGTTCAGCATCCTATTCTTGCTGGCGTTTATTGGATCTATAGTCTTCGGTGTCATGACTAAAGATGATCTGAAAAATGGGAGGATGAAGAGATGGTATCTTAGACCAGATGATTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCGATTTTTCACTTTCTGACAGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTACGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGCATTTTCATCAATCAAGACATTCACATGTACTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGAACTTTGACGTGTAACTCAATGGAGTTTATTAAGTGTTCTGTTGCTGGAACAGCTTATGGCAGTGGAGTCACTGAAACTGAAAGAGCTATGGAAGGAAGAAATGGTATGCCTATGCTTAATGGCAATGGTAATGGAAATATCTATAAACACAATGAGGATGCTACAGATACAACTCCCTCTGTCAAAGGCTTTAATTTTAAGGACAAAAGGATTATGAATGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCTGATGTGGATGAAAACACAGGCAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTTGAATTCTACCAGAGGACACAGACAAGTATATCAATTCGTGAACTGGATCCTAGGTCTGGAAGGAAGGTCGAAAGGTCCTATAAGCTTTTAAATGTTTTGGAGTTCAATAGTGCCCGGAAGAGGATGTCTGTCATAATAAGAGATGAAGAAGGGAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGTGAATTTGAAGAGAAAACGAAGGACCATATCAATGAGTATGCTGATGCAGGGCTAAGGACCTTGGTACTTGCTTATCGTGAACTTGAGGAGGAGGAATACAAAGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAATTAGTGCAGAGAGGGACTCATTGATTGATAAAGTAACAGATCGCATTGAAAGGGATTTAATTCTTCTCGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGATCAATATTGGTTTCGCATGTAGTTTGCTTAGACAAGGAATGAAACAGATTATTATAACTCTGGATACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGTGTCGTCCACAAGATAACTCGGGCAAGGTCTCAGCTCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACCTATGCTCTAGAGGATGAGGTGAAGGATACATTCCTTGAGCTTGCTATTGGATGTGCATCTGTTATTTGCTGTCGTTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTTAAACTTGCGACGGGGAAAACAACATTAGCAATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGTGGTGCCGAAGGAATGCAGGCAGTCATGTCGAGTGATATTGCAATTGCTCAGTTCAGATATTTGGAGCGTCTACTCCTTGTGCATGGACATTGGTGCTACAGAAGATTATCATCTATGATATGCTACTTTTTCTACAAGAATTTCACATTTGGTTTTACAATTTTCTTATATGAGGCATACACTTCATTCTCCGCACAACCTGCATATAACGACTGGTTTATGTCACTCTACAATGTTGTGTTCTCCGCACTGCCAGTTGTGGCTCTCGGGGTGTTTGACCAGGACGTGTCTGCAAGATATTGCCTCAAGTTTCCTATGTTGTACCAACAAGGTGTGCAGAATGTCCTCTTCAGCTGGGTCCGGATACTCAGCTGGATGTTTAATGGTCTGTGCAGTGCATTGATCATTTTCTTTTTCTGCACAAGTGGAATGCAGCACCAAGCATTTAACCCCGACGGGAAAACCGTGGGGAGGGATATTCTTGGAGCGACGATGCTGTCATGTGTTGTTTGGGTTGTCAATTTGCAGATGGCACTCGCTGTTAGCTACTTCACCTTGTTGCAGCATATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTCTTTTTGATGATATATGGAGCCTTTCCTGGCACCATATCGACGAATGCATATCGTGTATTCCTCGAAGCCCTTGCTCCTGCCGGGTCTTATTGGGTTCTGCTGATCTTTGTGGTGATCTCTACTCTCATTCCATTCTTTATATACTCAGCATTACAGATAAATTTCTTCCCCATGTACCATGAAAAAATACAGTGGATAAGGCATGATGGTAAGGGTCGGATAGACGATCCTGAGTTTGTCAATATGGTCAGGCAAAGCTCGTTGAGACCGACAAGTGTGGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGATAAATCATAG 3591 41.41 MRAGNRKRKLKLSKIYSFACGRSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYSAVSAIIPLIAVIIATMIKEGIEDWRRKAQDIEVNNRKVKVHQGNGVFDYAEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDVTAFANEDSSFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFSILFLLAFIGSIVFGVMTKDDLKNGRMKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPMLNGNGNGNIYKHNEDATDTTPSVKGFNFKDKRIMNGNWVNEPHADVIQKFFRLLATCHTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFYQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNASEFEEKTKDHINEYADAGLRTLVLAYRELEEEEYKEFDRKFYEAKNSISAERDSLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLDTPEIQALERTGEKDMITKASKESVVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDEVKDTFLELAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTIFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWVRILSWMFNGLCSALIIFFFCTSGMQHQAFNPDGKTVGRDILGATMLSCVVWVVNLQMALAVSYFTLLQHIFIWASIFIWYLFLMIYGAFPGTISTNAYRVFLEALAPAGSYWVLLIFVVISTLIPFFIYSALQINFFPMYHEKIQWIRHDGKGRIDDPEFVNMVRQSSLRPTSVGFTARLAAKIRRDKS 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 43586445 43593915 - Tan0012240.1 Tan11g2053 768990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2053 1196 Gene3D - 699 907 IPR023214 -
Tan11g2053 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
Tan11g2053 1196 FunFam Phospholipid-transporting ATPase 118 288 - -
Tan11g2053 1196 FunFam Phospholipid-transporting ATPase 703 907 - -
Tan11g2053 1196 SFLD p-type atpase 408 918 IPR044492 -
Tan11g2053 1196 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Tan11g2053 1196 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Tan11g2053 1196 FunFam Phospholipid-transporting ATPase 545 703 - -
Tan11g2053 1196 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Tan11g2053 1196 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Tan11g2053 1196 PRINTS P-type cation-transporting ATPase superfamily signature 753 763 - -
Tan11g2053 1196 NCBIfam HAD-IC family P-type ATPase 833 951 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g2053 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1145 IPR023298 -
Tan11g2053 1196 Gene3D - 116 288 - -
Tan11g2053 1196 Pfam Cation transport ATPase (P-type) 525 629 - -
Tan11g2053 1196 NCBIfam phospholipid-translocating P-type ATPase 57 1152 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g2053 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 704 IPR023299 GO:0000166(InterPro)
Tan11g2053 1196 Gene3D - 551 676 IPR023299 GO:0000166(InterPro)
Tan11g2053 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1153 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g2053 1196 CDD P-type_ATPase_APLT_Dnf-like 59 1027 - -
Tan11g2053 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Tan11g2053 1196 SUPERFAMILY HAD-like 421 922 IPR036412 -
Tan11g2053 1196 SFLD Haloacid Dehalogenase 408 918 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0924 Tan-Chr4:8029779 Tan11g2053 Tan-Chr11:43586445 0.00E+00 dispersed
Tan04g1151 Tan-Chr4:10788420 Tan11g2053 Tan-Chr11:43586445 3.00E-282 dispersed
Tan04g1152 Tan-Chr4:10788420 Tan11g2053 Tan-Chr11:43586445 3.40E-260 dispersed
Tan05g2304 Tan-Chr5:74511755 Tan11g2053 Tan-Chr11:43586445 0.00E+00 dispersed
Tan05g2305 Tan-Chr5:74511755 Tan11g2053 Tan-Chr11:43586445 0.00E+00 dispersed
Tan06g0157 Tan-Chr6:1452984 Tan11g2053 Tan-Chr11:43586445 0.00E+00 dispersed
Tan06g0158 Tan-Chr6:1452984 Tan11g2053 Tan-Chr11:43586445 0.00E+00 dispersed
Tan11g1040 Tan-Chr11:8196876 Tan11g2053 Tan-Chr11:43586445 1.70E-165 dispersed
Tan11g1042 Tan-Chr11:8209222 Tan11g2053 Tan-Chr11:43586445 4.90E-165 dispersed
Tan11g2053 Tan-Chr11:43586445 Tan11g2057 Tan-Chr11:43586445 0.00E+00 dispersed
Tan11g2053 Tan-Chr11:43586445 Tan11g2054 Tan-Chr11:43586445 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2053 K01530 - csv:101205800 2250.32