Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2055 ATGAGGGCTGGGAACCGAAAGAGGAAGCTAAAGCTTAGCAAGATCTATTCATTTGCCTGCGGAAGATCTTCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAATTCCATCAGCTCTACAAAGTACACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGTATTCTAGCCTTCACTCCTCTTGCTCCTTATTCTGCTGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATTGCGACAATGATTAAAGAAGGTATTGAAGATTGGCGACGAAAGGCACAGGATATTGAGGTGAATAATAGAAAGGTTAAAGTACATCAAGGCAATGGAGTTTTCGATTATGCTGAATGGAAAACTTTGAGGGTTGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGATTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAACAATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCACTGGATGTTACTGCATTTGCAAATGAGGATTCTAGCTTCCGTGACTTTAAGGCTACTATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGATTCCAAGGTTATTCAAAATTCTACTGATCCGCCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGTTGTTCAGCATCCTATTCTTGCTGGCGTTTATTGGATCTATAGTCTTCGGTGTCATGACTAAAGATGATCTGAAAAATGGGAGGATGAAGAGATGGTATCTTAGACCAGATGATTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCGATTTTTCACTTTCTGACAGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTACGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGCATTTTCATCAATCAAGACATTCACATGTACTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGAACTTTGACGTGTAACTCAATGGAGTTTATTAAGTGTTCTGTTGCTGGAACAGCTTATGGCAGTGGAGTCACTGAAACTGAAAGAGCTATGGAAGGAAGAAATGGTATGCCTATGCTTAATGGCAATGGTAATGGAAATATCTATAAACACAATGAGGATGCTACAGATACAACTCCCTCTGTCAAAGGCTTTAATTTTAAGGACAAAAGGATTATGAATGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCTGATGTGGATGAAAACACAGGCAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTTGAATTCTACCAGAGGACACAGACAAGTATATCAATTCGTGAACTGGATCCTAGGTCTGGAAGGAAGGTCGAAAGGTCCTATAAGCTTTTAAATGTTTTGGAGTTCAATAGTGCCCGGAAGAGGATGTCTGTCATAATAAGAGATGAAGAAGGGAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGTGAATTTGAAGAGAAAACGAAGGACCATATCAATGAGTATGCTGATGCAGGGCTAAGGACCTTGGTACTTGCTTATCGTGAACTTGAGGAGGAGGAATACAAAGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAATTAGTGCAGAGAGGGACTCATTGATTGATAAAGTAACAGATCGCATTGAAAGGGATTTAATTCTTCTCGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGATCAATATTGGTTTCGCATGTAGTTTGCTTAGACAAGGAATGAAACAGATTATTATAACTCTGGATACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGTGTCGTCCACAAGATAACTCGGGCAAGGTCTCAGCTCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACCTATGCTCTAGAGGATGAGGTGAAGGATACATTCCTTGAGCTTGCTATTGGATGTGCATCTGTTATTTGCTGTCGTTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTTAAACTTGCGACGGGGAAAACAACATTAGCAATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGTGGTGCCGAAGGAATGCAGGCAGTCATGTCGAGTGATATTGCAATTGCTCAGTTCAGATATTTGGAGCGTCTACTCCTTGTGCATGGACATTGGTGCTACAGAAGATTATCATCTATGGTAATTCCATTCACCAAGATGGATACACTCTGA 2811 40.66 MRAGNRKRKLKLSKIYSFACGRSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYSAVSAIIPLIAVIIATMIKEGIEDWRRKAQDIEVNNRKVKVHQGNGVFDYAEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDVTAFANEDSSFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFSILFLLAFIGSIVFGVMTKDDLKNGRMKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPMLNGNGNGNIYKHNEDATDTTPSVKGFNFKDKRIMNGNWVNEPHADVIQKFFRLLATCHTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFYQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNASEFEEKTKDHINEYADAGLRTLVLAYRELEEEEYKEFDRKFYEAKNSISAERDSLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLDTPEIQALERTGEKDMITKASKESVVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDEVKDTFLELAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMVIPFTKMDTL 936
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 43586445 43593915 - Tan0012240.3 Tan11g2055 768992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2055 936 Gene3D - 699 907 IPR023214 -
Tan11g2055 936 FunFam Phospholipid-transporting ATPase 545 703 - -
Tan11g2055 936 PRINTS P-type cation-transporting ATPase superfamily signature 753 763 - -
Tan11g2055 936 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Tan11g2055 936 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Tan11g2055 936 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 928 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g2055 936 Gene3D - 116 289 - -
Tan11g2055 936 FunFam Phospholipid-transporting ATPase 703 907 - -
Tan11g2055 936 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 928 IPR023298 -
Tan11g2055 936 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Tan11g2055 936 FunFam Phospholipid-transporting ATPase 118 288 - -
Tan11g2055 936 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 928 IPR032630 -
Tan11g2055 936 SFLD Haloacid Dehalogenase 408 918 - -
Tan11g2055 936 NCBIfam HAD-IC family P-type ATPase 833 927 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g2055 936 Gene3D - 549 677 IPR023299 GO:0000166(InterPro)
Tan11g2055 936 SUPERFAMILY HAD-like 421 922 IPR036412 -
Tan11g2055 936 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Tan11g2055 936 NCBIfam phospholipid-translocating P-type ATPase 57 928 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g2055 936 Pfam Cation transport ATPase (P-type) 525 629 - -
Tan11g2055 936 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 704 IPR023299 GO:0000166(InterPro)
Tan11g2055 936 SFLD p-type atpase 408 918 IPR044492 -
Tan11g2055 936 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g2055 Tan-Chr11:43586445 Tan11g2057 Tan-Chr11:43586445 0.00E+00 dispersed
Tan11g2054 Tan-Chr11:43586445 Tan11g2055 Tan-Chr11:43586445 0.00E+00 tandem
Tan11g2055 Tan-Chr11:43586445 Tan11g2056 Tan-Chr11:43586445 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2055 K01530 - csv:101205800 1731.07