Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2056 ATGAGGGCTGGGAACCGAAAGAGGAAGCTAAAGCTTAGCAAGATCTATTCATTTGCCTGCGGAAGATCTTCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAATTCCATCAGCTCTACAAAGTACACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGTATTCTAGCCTTCACTCCTCTTGCTCCTTATTCTGCTGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATTGCGACAATGATTAAAGAAGGTATTGAAGATTGGCGACGAAAGGCACAGGATATTGAGGTGAATAATAGAAAGGTTAAAGTACATCAAGGCAATGGAGTTTTCGATTATGCTGAATGGAAAACTTTGAGGGTTGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGATTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAACAATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCACTGGATGTTACTGCATTTGCAAATGAGGATTCTAGCTTCCGTGACTTTAAGGCTACTATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGATTCCAAGGTTATTCAAAATTCTACTGATCCGCCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGTTGTTCAGCATCCTATTCTTGCTGGCGTTTATTGGATCTATAGTCTTCGGTGTCATGACTAAAGATGATCTGAAAAATGGGAGGATGAAGAGATGGTATCTTAGACCAGATGATTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCGATTTTTCACTTTCTGACAGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTACGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGCATTTTCATCAATCAAGACATTCACATGTACTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGAACTTTGACGTGTAACTCAATGGAGTTTATTAAGTGTTCTGTTGCTGGAACAGCTTATGGCAGTGGAGTCACTGAAACTGAAAGAGCTATGGAAGGAAGAAATGGTATGCCTATGCTTAATGGCAATGGTAATGGAAATATCTATAAACACAATGAGGATGCTACAGATACAACTCCCTCTGTCAAAGGCTTTAATTTTAAGGACAAAAGGATTATGAATGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCTGATGTGGATGAAAACACAGGCAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTTGAATTCTACCAGAGGACACAGACAAGTATATCAATTCGTGAACTGGATCCTAGGTCTGGAAGGAAGGTCGAAAGGTCCTATAAGCTTTTAAATGTTTTGGAGTTCAATAGTGCCCGGAAGAGGATGTCTGTCATAATAAGAGATGAAGAAGGGAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGTGAATTTGAAGAGAAAACGAAGGACCATATCAATGAGTATGCTGATGCAGGGCTAAGGACCTTGGTACTTGCTTATCGTGAACTTGAGGAGGAGGAATACAAAGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAATTAGTGCAGAGAGGGACTCATTGATTGATAAAGTAACAGATCGCATTGAAAGGGATTTAATTCTTCTCGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGATCAATATTGGTTTCGCATGTAGTTTGCTTAGACAAGGAATGAAACAGATTATTATAACTCTGGATACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGTGTCGTCCACAAGATAACTCGGGCAAGGTCTCAGCTCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACCTATGCTCTAGAGGATGAGGTGAAGGATACATTCCTTGAGCTTGCTATTGGATGTGCATCTGTTATTTGCTGTCGTTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTTAAACTTGCGACGGGGAAAACAACATTAGCAATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGTGGTGCCGAAGGAATGCAGGCATGGAAAGCGCTTATTAGCATAATAATATCCAAGTTATTTACTTCAGCCTTTTGTTCTGTTTCTTATATCTTCTGTTGCATTTTGTCACATTTGATCTCCTCAGGCAGTCATGTCGAGTGA 2802 40.44 MRAGNRKRKLKLSKIYSFACGRSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYSAVSAIIPLIAVIIATMIKEGIEDWRRKAQDIEVNNRKVKVHQGNGVFDYAEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDVTAFANEDSSFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFSILFLLAFIGSIVFGVMTKDDLKNGRMKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPMLNGNGNGNIYKHNEDATDTTPSVKGFNFKDKRIMNGNWVNEPHADVIQKFFRLLATCHTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFYQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNASEFEEKTKDHINEYADAGLRTLVLAYRELEEEEYKEFDRKFYEAKNSISAERDSLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLDTPEIQALERTGEKDMITKASKESVVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDEVKDTFLELAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAWKALISIIISKLFTSAFCSVSYIFCCILSHLISSGSHVE 933
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 43586445 43593915 - Tan0012240.4 Tan11g2056 768993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2056 933 FunFam Phospholipid-transporting ATPase 703 905 - -
Tan11g2056 933 FunFam Phospholipid-transporting ATPase 545 703 - -
Tan11g2056 933 Gene3D - 699 905 IPR023214 -
Tan11g2056 933 PRINTS P-type cation-transporting ATPase superfamily signature 753 763 - -
Tan11g2056 933 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Tan11g2056 933 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Tan11g2056 933 SFLD p-type atpase 408 897 IPR044492 -
Tan11g2056 933 FunFam Phospholipid-transporting ATPase 118 288 - -
Tan11g2056 933 Gene3D - 116 289 - -
Tan11g2056 933 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 896 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g2056 933 Gene3D - 549 677 IPR023299 GO:0000166(InterPro)
Tan11g2056 933 Pfam Cation transport ATPase (P-type) 525 629 - -
Tan11g2056 933 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Tan11g2056 933 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 924 IPR023298 -
Tan11g2056 933 NCBIfam phospholipid-translocating P-type ATPase 57 896 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g2056 933 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 704 IPR023299 GO:0000166(InterPro)
Tan11g2056 933 SUPERFAMILY HAD-like 421 895 IPR036412 -
Tan11g2056 933 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Tan11g2056 933 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Tan11g2056 933 SFLD Haloacid Dehalogenase 408 897 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g2054 Tan-Chr11:43586445 Tan11g2056 Tan-Chr11:43586445 0.00E+00 dispersed
Tan11g2055 Tan-Chr11:43586445 Tan11g2056 Tan-Chr11:43586445 0.00E+00 tandem
Tan11g2056 Tan-Chr11:43586445 Tan11g2057 Tan-Chr11:43586445 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2056 K01530 - csv:101205800 1664.43