Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g2056 | ATGAGGGCTGGGAACCGAAAGAGGAAGCTAAAGCTTAGCAAGATCTATTCATTTGCCTGCGGAAGATCTTCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAATTCCATCAGCTCTACAAAGTACACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGTATTCTAGCCTTCACTCCTCTTGCTCCTTATTCTGCTGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATTGCGACAATGATTAAAGAAGGTATTGAAGATTGGCGACGAAAGGCACAGGATATTGAGGTGAATAATAGAAAGGTTAAAGTACATCAAGGCAATGGAGTTTTCGATTATGCTGAATGGAAAACTTTGAGGGTTGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGATTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAACAATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCACTGGATGTTACTGCATTTGCAAATGAGGATTCTAGCTTCCGTGACTTTAAGGCTACTATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGATTCCAAGGTTATTCAAAATTCTACTGATCCGCCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGTTGTTCAGCATCCTATTCTTGCTGGCGTTTATTGGATCTATAGTCTTCGGTGTCATGACTAAAGATGATCTGAAAAATGGGAGGATGAAGAGATGGTATCTTAGACCAGATGATTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCGATTTTTCACTTTCTGACAGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTACGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGCATTTTCATCAATCAAGACATTCACATGTACTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGAACTTTGACGTGTAACTCAATGGAGTTTATTAAGTGTTCTGTTGCTGGAACAGCTTATGGCAGTGGAGTCACTGAAACTGAAAGAGCTATGGAAGGAAGAAATGGTATGCCTATGCTTAATGGCAATGGTAATGGAAATATCTATAAACACAATGAGGATGCTACAGATACAACTCCCTCTGTCAAAGGCTTTAATTTTAAGGACAAAAGGATTATGAATGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCTGATGTGGATGAAAACACAGGCAAGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTTGAATTCTACCAGAGGACACAGACAAGTATATCAATTCGTGAACTGGATCCTAGGTCTGGAAGGAAGGTCGAAAGGTCCTATAAGCTTTTAAATGTTTTGGAGTTCAATAGTGCCCGGAAGAGGATGTCTGTCATAATAAGAGATGAAGAAGGGAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGTGAATTTGAAGAGAAAACGAAGGACCATATCAATGAGTATGCTGATGCAGGGCTAAGGACCTTGGTACTTGCTTATCGTGAACTTGAGGAGGAGGAATACAAAGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAATTAGTGCAGAGAGGGACTCATTGATTGATAAAGTAACAGATCGCATTGAAAGGGATTTAATTCTTCTCGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGATCAATATTGGTTTCGCATGTAGTTTGCTTAGACAAGGAATGAAACAGATTATTATAACTCTGGATACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGTGTCGTCCACAAGATAACTCGGGCAAGGTCTCAGCTCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACCTATGCTCTAGAGGATGAGGTGAAGGATACATTCCTTGAGCTTGCTATTGGATGTGCATCTGTTATTTGCTGTCGTTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTTAAACTTGCGACGGGGAAAACAACATTAGCAATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGTGGTGCCGAAGGAATGCAGGCATGGAAAGCGCTTATTAGCATAATAATATCCAAGTTATTTACTTCAGCCTTTTGTTCTGTTTCTTATATCTTCTGTTGCATTTTGTCACATTTGATCTCCTCAGGCAGTCATGTCGAGTGA | 2802 | 40.44 | MRAGNRKRKLKLSKIYSFACGRSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYSAVSAIIPLIAVIIATMIKEGIEDWRRKAQDIEVNNRKVKVHQGNGVFDYAEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDVTAFANEDSSFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFSILFLLAFIGSIVFGVMTKDDLKNGRMKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPMLNGNGNGNIYKHNEDATDTTPSVKGFNFKDKRIMNGNWVNEPHADVIQKFFRLLATCHTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFYQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNASEFEEKTKDHINEYADAGLRTLVLAYRELEEEEYKEFDRKFYEAKNSISAERDSLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLDTPEIQALERTGEKDMITKASKESVVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDEVKDTFLELAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAWKALISIIISKLFTSAFCSVSYIFCCILSHLISSGSHVE | 933 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 43586445 | 43593915 | - | Tan0012240.4 | Tan11g2056 | 768993 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g2056 | 933 | FunFam | Phospholipid-transporting ATPase | 703 | 905 | - | - | |
Tan11g2056 | 933 | FunFam | Phospholipid-transporting ATPase | 545 | 703 | - | - | |
Tan11g2056 | 933 | Gene3D | - | 699 | 905 | IPR023214 | - | |
Tan11g2056 | 933 | PRINTS | P-type cation-transporting ATPase superfamily signature | 753 | 763 | - | - | |
Tan11g2056 | 933 | PRINTS | P-type cation-transporting ATPase superfamily signature | 426 | 440 | - | - | |
Tan11g2056 | 933 | PRINTS | P-type cation-transporting ATPase superfamily signature | 867 | 886 | - | - | |
Tan11g2056 | 933 | SFLD | p-type atpase | 408 | 897 | IPR044492 | - | |
Tan11g2056 | 933 | FunFam | Phospholipid-transporting ATPase | 118 | 288 | - | - | |
Tan11g2056 | 933 | Gene3D | - | 116 | 289 | - | - | |
Tan11g2056 | 933 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 30 | 896 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Tan11g2056 | 933 | Gene3D | - | 549 | 677 | IPR023299 | GO:0000166(InterPro) | |
Tan11g2056 | 933 | Pfam | Cation transport ATPase (P-type) | 525 | 629 | - | - | |
Tan11g2056 | 933 | SUPERFAMILY | Calcium ATPase, transduction domain A | 141 | 285 | IPR008250 | - | |
Tan11g2056 | 933 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 56 | 924 | IPR023298 | - | |
Tan11g2056 | 933 | NCBIfam | phospholipid-translocating P-type ATPase | 57 | 896 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Tan11g2056 | 933 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 433 | 704 | IPR023299 | GO:0000166(InterPro) | |
Tan11g2056 | 933 | SUPERFAMILY | HAD-like | 421 | 895 | IPR036412 | - | |
Tan11g2056 | 933 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 428 | 434 | IPR018303 | - | |
Tan11g2056 | 933 | Pfam | Phospholipid-translocating ATPase N-terminal | 42 | 109 | IPR032631 | - | |
Tan11g2056 | 933 | SFLD | Haloacid Dehalogenase | 408 | 897 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g2054 | Tan-Chr11:43586445 | Tan11g2056 | Tan-Chr11:43586445 | 0.00E+00 | dispersed | |
Tan11g2055 | Tan-Chr11:43586445 | Tan11g2056 | Tan-Chr11:43586445 | 0.00E+00 | tandem | |
Tan11g2056 | Tan-Chr11:43586445 | Tan11g2057 | Tan-Chr11:43586445 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g2056 | K01530 | - | csv:101205800 | 1664.43 |