Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2080 ATGGTATTTCATGACGAACTAAACACATTGAGGTTGATTGTCATTTTGTACATGAGAAGATACGACAAGGTTTGGTATCGACAAGATATGAGGTTTCAAGGAAACTCTTTCATGGGCCCCATACCATCGACATTTGCAAATTTGACAGCTATGGATGAGTTGAGAATAGGTGATTTAACAAATGGGACATCTTCCCTAGCATTTATCAGGAAAATGACGTCTTTGAAGACCTTAGTACTGAGAAATAATAATATATCAGATTCAATTCCTTCCTACATTGGAGAGTTTAAAAAATTGAACCTGCTAGACTTGAGCTTTAATGAGTTAAGGGGAGTGATTCCGACCTCTCTTTTCATGTTGGATTCGCTAAAATACTTGTTTCTTGGAAATAACAAGTTAACAGGTATGCTACCTTCAGGAAAGTCTGGCTCTCTTCTTAGAATAGACTTATCATACAATGATTTATCAGGGAGCTTTCCTGTCTGGGTTGGTGATTCAGCCTTGCAGTTAAATCTAGTTGCCAACAACTTCCCAAATAGCGGCCCCATGCCTTCGGGTTTGAACTGTCTTCAACGAAAATTTTCTTGTAATCAAGCTTCTGGACCATATTCTAGATTTGGTATCAACTGTGGAGGTTCAAAACCTGTGAGTGCCTCTGGGGGGTTGTATGAAAGGGAAATGCCGATTGTTGGTATGGCTTCATACTATGTTAGTGACTCAGAAACTTGGGCTGTTAGTGATGTTGGATACTTTCCTGAGATGAAAAACTCTAGTCAATATTACAGAGACAATTACAAGGAACATAAATTTGCAAATACAAATGATATAGAACTTTTTCGGACACAAGAATTATCTACTTCCTCATTGAGATTTTACGGACTAGAGCTTAAAAACGGGAACTACACTGTGAACCTTCAGTTTGCAGAACAAGCTTTCCCAGATTCATCTACATGGAGCAGCCTTGGAAGGCGTGTCTTTGATATATATATTCAGGGGAACCTGGTCTCGAAGGATTTTAATATTCAAAATGAGGCAGGTGGGTCTTTTCGTGCTATTTCAAAAACATTTAAGGCACAAGTTTCAGAAAACTACATGGAAATTCATCTTTTTTGGGCTGGGAAAGGTACTTGCTGCATACCAGATGAAGGCACTTTTGGACCTTCTATTTCAGCAATCAGTGCAAGTCTAGAGCTCTTTGGAATAGATGAAAGACCGCACACTTTCAGTTATTCTGAACTAAGGAATGCTACGGAGGATTTTAGTTCATCCAACAAGCTTGGAGAAGGGGGGTTTGGACCCGTTTACAAGGGAATACTAAATGATGGAAGAGTAATTGCTGTAAAGCAACTTTCTATAAAATCTGACCAAGGAAGGAACCAGTTTGTGGCTGAGATTTCTACAATATCTGCTGTGCAACATCGCAACCTTGTGAAGTTGTACGGTTGTTGCATTGAGGGTGAAAAACGTCTCCTTGTTTATGAGTACCTGGAGAAAAGGAGTCTCGACCAAGCATTATTTGGAAAAAGAAATTTCACTCTTGACTGGCCAAAACGATTTTATATATGCTTGGGTGTTGCGAGAGGCCTGACTTATCTTCATGAGGAATCAAGACTTCGAATTGTTCATAGAGATATTAAAGCCAGTAACATTCTACTAGATGCTGATCTGAACCCTAAAATTTCAGATTTTGGCTTAGCGAAACTTTATGATGACAAAAAGACTCATATTAGCACCCTTGTTGCTGGAACAATCGGATACCTTGCACCTGAGTATGCCATGCGTGGTCATCTAACTGAGAAGGCTGATGTCTTTAGTTTTGGTGTTGTGGCTCTTGAAATTGTTAGTGGTAGGCCAAATTCGGCCCCTGGCTTGGAGGAGGACAAAGTTTTTCTTCTTGAATGGGTAAGAATGCTATATTTTTTCCCTTCTTTCCATTGGAAGCTTGCATGA 1950 39.54 MVFHDELNTLRLIVILYMRRYDKVWYRQDMRFQGNSFMGPIPSTFANLTAMDELRIGDLTNGTSSLAFIRKMTSLKTLVLRNNNISDSIPSYIGEFKKLNLLDLSFNELRGVIPTSLFMLDSLKYLFLGNNKLTGMLPSGKSGSLLRIDLSYNDLSGSFPVWVGDSALQLNLVANNFPNSGPMPSGLNCLQRKFSCNQASGPYSRFGINCGGSKPVSASGGLYEREMPIVGMASYYVSDSETWAVSDVGYFPEMKNSSQYYRDNYKEHKFANTNDIELFRTQELSTSSLRFYGLELKNGNYTVNLQFAEQAFPDSSTWSSLGRRVFDIYIQGNLVSKDFNIQNEAGGSFRAISKTFKAQVSENYMEIHLFWAGKGTCCIPDEGTFGPSISAISASLELFGIDERPHTFSYSELRNATEDFSSSNKLGEGGFGPVYKGILNDGRVIAVKQLSIKSDQGRNQFVAEISTISAVQHRNLVKLYGCCIEGEKRLLVYEYLEKRSLDQALFGKRNFTLDWPKRFYICLGVARGLTYLHEESRLRIVHRDIKASNILLDADLNPKISDFGLAKLYDDKKTHISTLVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSAPGLEEDKVFLLEWVRMLYFFPSFHWKLA 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 44418662 44460039 + Tan0007028.1 Tan11g2080 769017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2080 649 Gene3D Transferase(Phosphotransferase) domain 1 496 645 - -
Tan11g2080 649 SUPERFAMILY L domain-like 30 185 - -
Tan11g2080 649 FunFam Putative LRR receptor-like serine/threonine-protein kinase 62 183 - -
Tan11g2080 649 FunFam Lectin-domain containing receptor kinase A4.3 496 643 - -
Tan11g2080 649 FunFam Leucine-rich repeat receptor-like protein kinase 391 495 - -
Tan11g2080 649 Gene3D Phosphorylase Kinase; domain 1 393 495 - -
Tan11g2080 649 Pfam Protein tyrosine and serine/threonine kinase 423 629 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g2080 649 Pfam Leucine rich repeat 74 133 IPR001611 GO:0005515(InterPro)
Tan11g2080 649 ProSiteProfiles Protein kinase domain profile. 420 649 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2080 649 SUPERFAMILY Protein kinase-like (PK-like) 406 638 IPR011009 -
Tan11g2080 649 Gene3D - 208 392 - -
Tan11g2080 649 Gene3D Ribonuclease Inhibitor 26 207 IPR032675 -
Tan11g2080 649 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 28 635 IPR051824 GO:0005886(PANTHER)
Tan11g2080 649 SMART serkin_6 420 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2080 649 Pfam Malectin domain 207 392 IPR021720 -
Tan11g2080 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0057 Tan-Chr2:761236 Tan11g2080 Tan-Chr11:44418662 4.60E-183 dispersed
Tan11g2080 Tan-Chr11:44418662 Tan09g1760 Tan-Chr9:69133213 3.00E-71 dispersed
Tan11g2080 Tan-Chr11:44418662 Tan05g2539 Tan-Chr5:76713709 8.10E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68229 PF07714 PK_Tyr_Ser-Thr 2.50E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2080 - - - 0.0