Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g2080 | ATGGTATTTCATGACGAACTAAACACATTGAGGTTGATTGTCATTTTGTACATGAGAAGATACGACAAGGTTTGGTATCGACAAGATATGAGGTTTCAAGGAAACTCTTTCATGGGCCCCATACCATCGACATTTGCAAATTTGACAGCTATGGATGAGTTGAGAATAGGTGATTTAACAAATGGGACATCTTCCCTAGCATTTATCAGGAAAATGACGTCTTTGAAGACCTTAGTACTGAGAAATAATAATATATCAGATTCAATTCCTTCCTACATTGGAGAGTTTAAAAAATTGAACCTGCTAGACTTGAGCTTTAATGAGTTAAGGGGAGTGATTCCGACCTCTCTTTTCATGTTGGATTCGCTAAAATACTTGTTTCTTGGAAATAACAAGTTAACAGGTATGCTACCTTCAGGAAAGTCTGGCTCTCTTCTTAGAATAGACTTATCATACAATGATTTATCAGGGAGCTTTCCTGTCTGGGTTGGTGATTCAGCCTTGCAGTTAAATCTAGTTGCCAACAACTTCCCAAATAGCGGCCCCATGCCTTCGGGTTTGAACTGTCTTCAACGAAAATTTTCTTGTAATCAAGCTTCTGGACCATATTCTAGATTTGGTATCAACTGTGGAGGTTCAAAACCTGTGAGTGCCTCTGGGGGGTTGTATGAAAGGGAAATGCCGATTGTTGGTATGGCTTCATACTATGTTAGTGACTCAGAAACTTGGGCTGTTAGTGATGTTGGATACTTTCCTGAGATGAAAAACTCTAGTCAATATTACAGAGACAATTACAAGGAACATAAATTTGCAAATACAAATGATATAGAACTTTTTCGGACACAAGAATTATCTACTTCCTCATTGAGATTTTACGGACTAGAGCTTAAAAACGGGAACTACACTGTGAACCTTCAGTTTGCAGAACAAGCTTTCCCAGATTCATCTACATGGAGCAGCCTTGGAAGGCGTGTCTTTGATATATATATTCAGGGGAACCTGGTCTCGAAGGATTTTAATATTCAAAATGAGGCAGGTGGGTCTTTTCGTGCTATTTCAAAAACATTTAAGGCACAAGTTTCAGAAAACTACATGGAAATTCATCTTTTTTGGGCTGGGAAAGGTACTTGCTGCATACCAGATGAAGGCACTTTTGGACCTTCTATTTCAGCAATCAGTGCAAGTCTAGAGCTCTTTGGAATAGATGAAAGACCGCACACTTTCAGTTATTCTGAACTAAGGAATGCTACGGAGGATTTTAGTTCATCCAACAAGCTTGGAGAAGGGGGGTTTGGACCCGTTTACAAGGGAATACTAAATGATGGAAGAGTAATTGCTGTAAAGCAACTTTCTATAAAATCTGACCAAGGAAGGAACCAGTTTGTGGCTGAGATTTCTACAATATCTGCTGTGCAACATCGCAACCTTGTGAAGTTGTACGGTTGTTGCATTGAGGGTGAAAAACGTCTCCTTGTTTATGAGTACCTGGAGAAAAGGAGTCTCGACCAAGCATTATTTGGAAAAAGAAATTTCACTCTTGACTGGCCAAAACGATTTTATATATGCTTGGGTGTTGCGAGAGGCCTGACTTATCTTCATGAGGAATCAAGACTTCGAATTGTTCATAGAGATATTAAAGCCAGTAACATTCTACTAGATGCTGATCTGAACCCTAAAATTTCAGATTTTGGCTTAGCGAAACTTTATGATGACAAAAAGACTCATATTAGCACCCTTGTTGCTGGAACAATCGGATACCTTGCACCTGAGTATGCCATGCGTGGTCATCTAACTGAGAAGGCTGATGTCTTTAGTTTTGGTGTTGTGGCTCTTGAAATTGTTAGTGGTAGGCCAAATTCGGCCCCTGGCTTGGAGGAGGACAAAGTTTTTCTTCTTGAATGGGTAAGAATGCTATATTTTTTCCCTTCTTTCCATTGGAAGCTTGCATGA | 1950 | 39.54 | MVFHDELNTLRLIVILYMRRYDKVWYRQDMRFQGNSFMGPIPSTFANLTAMDELRIGDLTNGTSSLAFIRKMTSLKTLVLRNNNISDSIPSYIGEFKKLNLLDLSFNELRGVIPTSLFMLDSLKYLFLGNNKLTGMLPSGKSGSLLRIDLSYNDLSGSFPVWVGDSALQLNLVANNFPNSGPMPSGLNCLQRKFSCNQASGPYSRFGINCGGSKPVSASGGLYEREMPIVGMASYYVSDSETWAVSDVGYFPEMKNSSQYYRDNYKEHKFANTNDIELFRTQELSTSSLRFYGLELKNGNYTVNLQFAEQAFPDSSTWSSLGRRVFDIYIQGNLVSKDFNIQNEAGGSFRAISKTFKAQVSENYMEIHLFWAGKGTCCIPDEGTFGPSISAISASLELFGIDERPHTFSYSELRNATEDFSSSNKLGEGGFGPVYKGILNDGRVIAVKQLSIKSDQGRNQFVAEISTISAVQHRNLVKLYGCCIEGEKRLLVYEYLEKRSLDQALFGKRNFTLDWPKRFYICLGVARGLTYLHEESRLRIVHRDIKASNILLDADLNPKISDFGLAKLYDDKKTHISTLVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSAPGLEEDKVFLLEWVRMLYFFPSFHWKLA | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 44418662 | 44460039 | + | Tan0007028.1 | Tan11g2080 | 769017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g2080 | 649 | Gene3D | Transferase(Phosphotransferase) domain 1 | 496 | 645 | - | - | |
Tan11g2080 | 649 | SUPERFAMILY | L domain-like | 30 | 185 | - | - | |
Tan11g2080 | 649 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 62 | 183 | - | - | |
Tan11g2080 | 649 | FunFam | Lectin-domain containing receptor kinase A4.3 | 496 | 643 | - | - | |
Tan11g2080 | 649 | FunFam | Leucine-rich repeat receptor-like protein kinase | 391 | 495 | - | - | |
Tan11g2080 | 649 | Gene3D | Phosphorylase Kinase; domain 1 | 393 | 495 | - | - | |
Tan11g2080 | 649 | Pfam | Protein tyrosine and serine/threonine kinase | 423 | 629 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan11g2080 | 649 | Pfam | Leucine rich repeat | 74 | 133 | IPR001611 | GO:0005515(InterPro) | |
Tan11g2080 | 649 | ProSiteProfiles | Protein kinase domain profile. | 420 | 649 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g2080 | 649 | SUPERFAMILY | Protein kinase-like (PK-like) | 406 | 638 | IPR011009 | - | |
Tan11g2080 | 649 | Gene3D | - | 208 | 392 | - | - | |
Tan11g2080 | 649 | Gene3D | Ribonuclease Inhibitor | 26 | 207 | IPR032675 | - | |
Tan11g2080 | 649 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 28 | 635 | IPR051824 | GO:0005886(PANTHER) | |
Tan11g2080 | 649 | SMART | serkin_6 | 420 | 647 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g2080 | 649 | Pfam | Malectin domain | 207 | 392 | IPR021720 | - | |
Tan11g2080 | 649 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 540 | 552 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0057 | Tan-Chr2:761236 | Tan11g2080 | Tan-Chr11:44418662 | 4.60E-183 | dispersed | |
Tan11g2080 | Tan-Chr11:44418662 | Tan09g1760 | Tan-Chr9:69133213 | 3.00E-71 | dispersed | |
Tan11g2080 | Tan-Chr11:44418662 | Tan05g2539 | Tan-Chr5:76713709 | 8.10E-109 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68229 | PF07714 | PK_Tyr_Ser-Thr | 2.50E-45 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g2080 | - | - | - | 0.0 |