Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2115 ATGGCACTGGTCTTGCACGCAGGAAAGACGAATAAAAATGCTTTCAAGGCTCTCATTGCTGCAGAGTTCAATGGAGTGGAAGTGAAATTGGTCCCAGACTTCGAGATGGGAGTCTCAAACAAGACTCCGGAGTTCATCAAGATGAACCCTATTGGGAAGGTCCCTGTTTTGGAAACGCCCGATGGCTCCATATTTGAGAGCAATGCCATAGCTCGCTATGTTGCACGCTTGAAGGCTGATAGTACTCTGTATGGTTCAGCTCCTATTGATTATGGGCATATTGAAAAATGGATTGATTTTGCATCATTGGAGATAGATTCTAATATTGTTGCTTGGTTAAGACCGAGAATGGGGAGAGCTGTTTATCTTCCTCCTGTCGAGGAAGCTGCAATCGCTGCATTGAAGAGGGCTTTGGGAGCTTTGAATGCATACCTTGCTTCAAACACATACCTAGTTGGTCATTCTGTAACATTGGCCGACATCATCATGACTTGCAACCTGTTATTAGGTTTCACTCTGCTCATGACTAAGAGCTTTACCTCAGAGTTCCCACATGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCAAACATCAAAAAAATTCTGGGTGAGGTGAAGCAGGCAGAGTCAGTTCTACCAATTCAATCTGCAAAGAAACCTTATGAATCTACTACTAATCAAAAGCCCAAGGATGAGGTAAAGAAAGATCCCAAAAAGGAAGCGGAAAAAGAGAAGCCCAAGGCTGTAGTTGGCGAGGGAGAGGATGAAGCACCAAAGCCGAAACCCAAGAATCCTCTTGATTTGCTTCCTCCCAGTAAGATGATTCTCGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTCCGGGAGATTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGGTATTCTCTTTGGTTCTGTGATTACAAATACAACGATGAGAATACTGTTTCGTTCGTGACTTTGAACAAGGTTGGTGGATTTCTCCAGCGAATGGATCTCGCTCGTAAGTATGCGTTTGGGAAGATGTTAGTGATTGGATCAGAGGCTCCATTTAAAGTTAAGGGGTTGTGGCTTTTCCGTGGACAAGAGATCCCACAATTCGTCCTGGACGAGTGCTACGACATGGAACTTTATGAATGGAGAAAGGTCGACATATCAGACGAGGCACAGAAGGAACGGGTCAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGAGAGGCTTTGTTGGATGCCAAATGCTTCAAGTGA 1272 44.42 MALVLHAGKTNKNAFKALIAAEFNGVEVKLVPDFEMGVSNKTPEFIKMNPIGKVPVLETPDGSIFESNAIARYVARLKADSTLYGSAPIDYGHIEKWIDFASLEIDSNIVAWLRPRMGRAVYLPPVEEAAIAALKRALGALNAYLASNTYLVGHSVTLADIIMTCNLLLGFTLLMTKSFTSEFPHVERYFWTLVNQPNIKKILGEVKQAESVLPIQSAKKPYESTTNQKPKDEVKKDPKKEAEKEKPKAVVGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFVLDECYDMELYEWRKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 49913260 49917245 - Tan0011454.1 Tan11g2115 769052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2115 423 SUPERFAMILY eEF1-gamma domain 263 423 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Tan11g2115 423 SFLD Main (cytGST) 4 190 - -
Tan11g2115 423 CDD GST_N_EF1Bgamma 3 77 - -
Tan11g2115 423 SMART EF1G_2 262 370 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Tan11g2115 423 MobiDBLite consensus disorder prediction 218 270 - -
Tan11g2115 423 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 263 423 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Tan11g2115 423 Gene3D Glutaredoxin 1 74 - -
Tan11g2115 423 Pfam Glutathione S-transferase, N-terminal domain 9 76 IPR004045 -
Tan11g2115 423 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Tan11g2115 423 Pfam Glutathione S-transferase, C-terminal domain 127 197 IPR004046 -
Tan11g2115 423 MobiDBLite consensus disorder prediction 225 263 - -
Tan11g2115 423 FunFam Elongation factor 1B gamma 1 74 - -
Tan11g2115 423 CDD GST_C_EF1Bgamma_like 90 210 - -
Tan11g2115 423 Pfam Elongation factor 1 gamma, conserved domain 262 370 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Tan11g2115 423 SFLD Glutathione Transferase (cytosolic) 4 190 IPR040079 -
Tan11g2115 423 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 263 423 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Tan11g2115 423 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Tan11g2115 423 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 423 IPR044628 GO:0004364(InterPro)
Tan11g2115 423 FunFam Elongation factor 1-gamma 1 263 423 - -
Tan11g2115 423 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Tan11g2115 423 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Tan11g2115 423 Gene3D - 80 217 - -
Tan11g2115 423 FunFam Elongation factor 1 gamma 80 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1535 Tan-Chr1:15647357 Tan11g2115 Tan-Chr11:49913260 1.30E-181 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2115 K03233 - vvi:100264325 695.271