Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2116 ATGGGCTGCATTTGCTCTAAAGGAATTCCAGCAAACGACTATGTTGCTGAGAATCATTCCAAAGAAAGGCATTTGAAGTCTAATAGATCTTCCAGACTTCTAGGGGCTTCATTGAGGAAAGAAGAACCCGTGTTGCATGCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATCGAACCAACCTGCGGAAGAGAATGCTGGATCGACACCTGAATCGGATGATGTTGAGAAGGCAGCACCCATTCAAAAAGCTGCCAGTGCCAAGCCACTGCGTCAAGAACGGCCAACTATGGAGGATGGAGCAAAGAGGGGAGTACATAATAATAATGCAACACCTAGAATAATCAATGTTGTTAATGGGGAAAGGGGGGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTTGCTGGAGAAGCAATCAATGGATGGATTCCTAGAAAGGCAGACTCTTTTCAGAAATTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAGCGAACAAGATTGTTGCGTTGAAGAAGGTGCGGTTTGCTAATATGGATCCTGAAAGTGTTCGTTTCATGGCCAGGGAGATCCTCATCCTGCGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATTACTTCAAGGGTATCTGGCAGTCTATACCTCATATTTGAGTACATGGAACATGATCTTGCAGGGTTGGCAGCAACCCCAGGGATCAAGTTCACTGAATCGCAGATAAAATGCTATATGCAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCCCAGGGAGTTTTGCACCGTGACATCAAGGGATCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGACAAAAGCAACCCCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCGCCGGAGCTTTTGCTTGGTGCGACGGACTATGGAGTATCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAATTGTATGCTGGGAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACATAAGATCTTCAAACTTTGTGGCTCCCCTTCTGAAGAGTACTGGAAAAAATCAAAATTACCTCATGCTACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTCCCTTCCTCTGCATTGGCCCTTTTGGATGTACTTCTTGCAGTTGAACCTGATGGCCGTGGCACAGCTTCCTCTGCCCTTCAAAGCGAGTTCTTTACCACAAAACCTCTTCCCGCGGATCCCTCTACTTTGCCAAAGTACCCACCAAGCAAGGAGTTCGATGCCAAGCTTCGAGACGAGGAAACTCGAAGAAGAAGAGCTCCTATCAGTGTGGCACGTGAATATGAAGCAGCTCGAAAGTTTCCCAGAGAATCTAAAGCGATTCCTGCACCAGATGCAAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGACAGCAAAATCCTACAAGTGTTAGTGAAAAGTATAATCCTGAAGAGGGCGGAGGTTCTGGCTTTCGCATTGAGCCCCCCAAAGAAGCAACACAAACTCAACCGAATGTCTCGGGTTCTTCACGAAACATGAATGGGAATCAGGGCGATACTCTAAGAGGTTCTTCAGTCGGGGAAAAAGGTGCAGAACTCAGAAAACAAAGATCTTATATGCAACATGGTGCTGGACAGTTATCCCGGTATTCCAATTCCGTTGCAGTTCGAGGAGGTGGTTCGGGATTTGGGTGTGGTGGAGAAAGTAGTACTAATTCACATTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGTGAATCTTCAGAAAAGCATGAATGGTCCCACCATTTATTAGACAGGCCAAAGTCTTCATATAAGATAGATGATCAATCATCTGGAAAAGAGTCTGCTAGGAATTACGCTCCAAAAAAGAGGATTCACTATTCAGGGCCCTTGATGCCACATGGTGGAAACCTTGAAGAAATGTTAAGAGAGCACGAGAAACAAATCCAGCATGCTGTGCGCAAGGCTCGTATAGACAAAGCTAAGACAAAAAAGACGTACGATGACAAAGGTATATCGGAATCGTTGCTTCACCATGCAAGAAATGGCAATTGA 2202 45.28 MGCICSKGIPANDYVAENHSKERHLKSNRSSRLLGASLRKEEPVLHADGGQSDAMARLISNQPAEENAGSTPESDDVEKAAPIQKAASAKPLRQERPTMEDGAKRGVHNNNATPRIINVVNGERGALVIAGWPSWLTSVAGEAINGWIPRKADSFQKLDKIGQGTYSSVYRARDIEANKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAATPGIKFTESQIKCYMQQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPSSALALLDVLLAVEPDGRGTASSALQSEFFTTKPLPADPSTLPKYPPSKEFDAKLRDEETRRRRAPISVAREYEAARKFPRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNPEEGGGSGFRIEPPKEATQTQPNVSGSSRNMNGNQGDTLRGSSVGEKGAELRKQRSYMQHGAGQLSRYSNSVAVRGGGSGFGCGGESSTNSHWPEECFNVSYNHFNGGESSEKHEWSHHLLDRPKSSYKIDDQSSGKESARNYAPKKRIHYSGPLMPHGGNLEEMLREHEKQIQHAVRKARIDKAKTKKTYDDKGISESLLHHARNGN 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 50229547 50241848 + Tan0008647.1 Tan11g2116 769053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2116 733 Gene3D Transferase(Phosphotransferase) domain 1 238 478 - -
Tan11g2116 733 FunFam probable serine/threonine-protein kinase At1g54610 238 479 - -
Tan11g2116 733 MobiDBLite consensus disorder prediction 507 525 - -
Tan11g2116 733 FunFam probable serine/threonine-protein kinase At1g54610 142 237 - -
Tan11g2116 733 MobiDBLite consensus disorder prediction 19 110 - -
Tan11g2116 733 MobiDBLite consensus disorder prediction 507 591 - -
Tan11g2116 733 MobiDBLite consensus disorder prediction 19 47 - -
Tan11g2116 733 SUPERFAMILY Protein kinase-like (PK-like) 149 445 IPR011009 -
Tan11g2116 733 MobiDBLite consensus disorder prediction 539 566 - -
Tan11g2116 733 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Tan11g2116 733 PANTHER CELL DIVISION PROTEIN KINASE 154 439 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan11g2116 733 MobiDBLite consensus disorder prediction 458 478 - -
Tan11g2116 733 MobiDBLite consensus disorder prediction 694 725 - -
Tan11g2116 733 ProSiteProfiles Protein kinase domain profile. 155 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2116 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g2116 733 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524(InterPro)
Tan11g2116 733 Pfam Protein kinase domain 155 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2116 733 MobiDBLite consensus disorder prediction 55 69 - -
Tan11g2116 733 CDD STKc_CDK9_like 155 439 - -
Tan11g2116 733 SMART serkin_6 155 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2116 733 MobiDBLite consensus disorder prediction 441 478 - -
Tan11g2116 733 MobiDBLite consensus disorder prediction 694 733 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0763 Tan-Chr5:5558954 Tan11g2116 Tan-Chr11:50229547 1.60E-126 dispersed
Tan10g0948 Tan-Chr10:8276276 Tan11g2116 Tan-Chr11:50229547 3.30E-175 dispersed
Tan10g0949 Tan-Chr10:8276276 Tan11g2116 Tan-Chr11:50229547 7.00E-155 dispersed
Tan10g2000 Tan-Chr10:63712854 Tan11g2116 Tan-Chr11:50229547 3.70E-194 dispersed
Tan11g0470 Tan-Chr11:3864165 Tan11g2116 Tan-Chr11:50229547 2.50E-140 dispersed
Tan11g0964 Tan-Chr11:7749317 Tan11g2116 Tan-Chr11:50229547 1.40E-95 dispersed
Tan11g2116 Tan-Chr11:50229547 Tan06g1971 Tan-Chr6:62495526 1.30E-41 dispersed
Tan11g2116 Tan-Chr11:50229547 Tan11g2117 Tan-Chr11:50234928 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68230 PF00069 Pkinase 4.80E-68 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2116 - - - 0.0