Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g2116 | ATGGGCTGCATTTGCTCTAAAGGAATTCCAGCAAACGACTATGTTGCTGAGAATCATTCCAAAGAAAGGCATTTGAAGTCTAATAGATCTTCCAGACTTCTAGGGGCTTCATTGAGGAAAGAAGAACCCGTGTTGCATGCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATCGAACCAACCTGCGGAAGAGAATGCTGGATCGACACCTGAATCGGATGATGTTGAGAAGGCAGCACCCATTCAAAAAGCTGCCAGTGCCAAGCCACTGCGTCAAGAACGGCCAACTATGGAGGATGGAGCAAAGAGGGGAGTACATAATAATAATGCAACACCTAGAATAATCAATGTTGTTAATGGGGAAAGGGGGGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTTGCTGGAGAAGCAATCAATGGATGGATTCCTAGAAAGGCAGACTCTTTTCAGAAATTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAGCGAACAAGATTGTTGCGTTGAAGAAGGTGCGGTTTGCTAATATGGATCCTGAAAGTGTTCGTTTCATGGCCAGGGAGATCCTCATCCTGCGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATTACTTCAAGGGTATCTGGCAGTCTATACCTCATATTTGAGTACATGGAACATGATCTTGCAGGGTTGGCAGCAACCCCAGGGATCAAGTTCACTGAATCGCAGATAAAATGCTATATGCAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCCCAGGGAGTTTTGCACCGTGACATCAAGGGATCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGACAAAAGCAACCCCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCGCCGGAGCTTTTGCTTGGTGCGACGGACTATGGAGTATCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAATTGTATGCTGGGAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACATAAGATCTTCAAACTTTGTGGCTCCCCTTCTGAAGAGTACTGGAAAAAATCAAAATTACCTCATGCTACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTCCCTTCCTCTGCATTGGCCCTTTTGGATGTACTTCTTGCAGTTGAACCTGATGGCCGTGGCACAGCTTCCTCTGCCCTTCAAAGCGAGTTCTTTACCACAAAACCTCTTCCCGCGGATCCCTCTACTTTGCCAAAGTACCCACCAAGCAAGGAGTTCGATGCCAAGCTTCGAGACGAGGAAACTCGAAGAAGAAGAGCTCCTATCAGTGTGGCACGTGAATATGAAGCAGCTCGAAAGTTTCCCAGAGAATCTAAAGCGATTCCTGCACCAGATGCAAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGACAGCAAAATCCTACAAGTGTTAGTGAAAAGTATAATCCTGAAGAGGGCGGAGGTTCTGGCTTTCGCATTGAGCCCCCCAAAGAAGCAACACAAACTCAACCGAATGTCTCGGGTTCTTCACGAAACATGAATGGGAATCAGGGCGATACTCTAAGAGGTTCTTCAGTCGGGGAAAAAGGTGCAGAACTCAGAAAACAAAGATCTTATATGCAACATGGTGCTGGACAGTTATCCCGGTATTCCAATTCCGTTGCAGTTCGAGGAGGTGGTTCGGGATTTGGGTGTGGTGGAGAAAGTAGTACTAATTCACATTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGTGAATCTTCAGAAAAGCATGAATGGTCCCACCATTTATTAGACAGGCCAAAGTCTTCATATAAGATAGATGATCAATCATCTGGAAAAGAGTCTGCTAGGAATTACGCTCCAAAAAAGAGGATTCACTATTCAGGGCCCTTGATGCCACATGGTGGAAACCTTGAAGAAATGTTAAGAGAGCACGAGAAACAAATCCAGCATGCTGTGCGCAAGGCTCGTATAGACAAAGCTAAGACAAAAAAGACGTACGATGACAAAGGTATATCGGAATCGTTGCTTCACCATGCAAGAAATGGCAATTGA | 2202 | 45.28 | MGCICSKGIPANDYVAENHSKERHLKSNRSSRLLGASLRKEEPVLHADGGQSDAMARLISNQPAEENAGSTPESDDVEKAAPIQKAASAKPLRQERPTMEDGAKRGVHNNNATPRIINVVNGERGALVIAGWPSWLTSVAGEAINGWIPRKADSFQKLDKIGQGTYSSVYRARDIEANKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAATPGIKFTESQIKCYMQQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPSSALALLDVLLAVEPDGRGTASSALQSEFFTTKPLPADPSTLPKYPPSKEFDAKLRDEETRRRRAPISVAREYEAARKFPRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNPEEGGGSGFRIEPPKEATQTQPNVSGSSRNMNGNQGDTLRGSSVGEKGAELRKQRSYMQHGAGQLSRYSNSVAVRGGGSGFGCGGESSTNSHWPEECFNVSYNHFNGGESSEKHEWSHHLLDRPKSSYKIDDQSSGKESARNYAPKKRIHYSGPLMPHGGNLEEMLREHEKQIQHAVRKARIDKAKTKKTYDDKGISESLLHHARNGN | 733 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 50229547 | 50241848 | + | Tan0008647.1 | Tan11g2116 | 769053 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g2116 | 733 | Gene3D | Transferase(Phosphotransferase) domain 1 | 238 | 478 | - | - | |
Tan11g2116 | 733 | FunFam | probable serine/threonine-protein kinase At1g54610 | 238 | 479 | - | - | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 507 | 525 | - | - | |
Tan11g2116 | 733 | FunFam | probable serine/threonine-protein kinase At1g54610 | 142 | 237 | - | - | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 19 | 110 | - | - | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 507 | 591 | - | - | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 19 | 47 | - | - | |
Tan11g2116 | 733 | SUPERFAMILY | Protein kinase-like (PK-like) | 149 | 445 | IPR011009 | - | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 539 | 566 | - | - | |
Tan11g2116 | 733 | Gene3D | Phosphorylase Kinase; domain 1 | 142 | 237 | - | - | |
Tan11g2116 | 733 | PANTHER | CELL DIVISION PROTEIN KINASE | 154 | 439 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 458 | 478 | - | - | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 694 | 725 | - | - | |
Tan11g2116 | 733 | ProSiteProfiles | Protein kinase domain profile. | 155 | 439 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g2116 | 733 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 275 | 287 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan11g2116 | 733 | ProSitePatterns | Protein kinases ATP-binding region signature. | 161 | 184 | IPR017441 | GO:0005524(InterPro) | |
Tan11g2116 | 733 | Pfam | Protein kinase domain | 155 | 439 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 55 | 69 | - | - | |
Tan11g2116 | 733 | CDD | STKc_CDK9_like | 155 | 439 | - | - | |
Tan11g2116 | 733 | SMART | serkin_6 | 155 | 439 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 441 | 478 | - | - | |
Tan11g2116 | 733 | MobiDBLite | consensus disorder prediction | 694 | 733 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0763 | Tan-Chr5:5558954 | Tan11g2116 | Tan-Chr11:50229547 | 1.60E-126 | dispersed | |
Tan10g0948 | Tan-Chr10:8276276 | Tan11g2116 | Tan-Chr11:50229547 | 3.30E-175 | dispersed | |
Tan10g0949 | Tan-Chr10:8276276 | Tan11g2116 | Tan-Chr11:50229547 | 7.00E-155 | dispersed | |
Tan10g2000 | Tan-Chr10:63712854 | Tan11g2116 | Tan-Chr11:50229547 | 3.70E-194 | dispersed | |
Tan11g0470 | Tan-Chr11:3864165 | Tan11g2116 | Tan-Chr11:50229547 | 2.50E-140 | dispersed | |
Tan11g0964 | Tan-Chr11:7749317 | Tan11g2116 | Tan-Chr11:50229547 | 1.40E-95 | dispersed | |
Tan11g2116 | Tan-Chr11:50229547 | Tan06g1971 | Tan-Chr6:62495526 | 1.30E-41 | dispersed | |
Tan11g2116 | Tan-Chr11:50229547 | Tan11g2117 | Tan-Chr11:50234928 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68230 | PF00069 | Pkinase | 4.80E-68 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g2116 | - | - | - | 0.0 |