Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g2117 | ATGGATCCTGAAAGTGTTCGTTTCATGGCCAGGGAGATCCTCATCCTGCGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATTACTTCAAGGGTATCTGGCAGTCTATACCTCATATTTGAGTACATGGAACATGATCTTGCAGGGTTGGCAGCAACCCCAGGGATCAAGTTCACTGAATCGCAGATAAAATGCTATATGCAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCCCAGGGAGTTTTGCACCGTGACATCAAGGGATCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGACAAAAGCAACCCCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCGCCGGAGCTTTTGCTTGGTGCGACGGACTATGGAGTATCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAATTGTATGCTGGGAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACATAAGATCTTCAAACTTTGTGGCTCCCCTTCTGAAGAGTACTGGAAAAAATCAAAATTACCTCATGCTACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTCCCTTCCTCTGCATTGGCCCTTTTGGATGTACTTCTTGCAGTTGAACCTGATGGCCGTGGCACAGCTTCCTCTGCCCTTCAAAGCGAGTTCTTTACCACAAAACCTCTTCCCGCGGATCCCTCTACTTTGCCAAAGTACCCACCAAGCAAGGAGTTCGATGCCAAGCTTCGAGACGAGGAAACTCGAAGAAGAAGAGCTCCTATCAGTGTGGCACGTGAATATGAAGCAGCTCGAAAGTTTCCCAGAGAATCTAAAGCGATTCCTGCACCAGATGCAAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGACAGCAAAATCCTACAAGTGTTAGTGAAAAGTATAATCCTGAAGAGGGCGGAGGTTCTGGCTTTCGCATTGAGCCCCCCAAAGAAGCAACACAAACTCAACCGAATGTCTCGGGTTCTTCACGAAACATGAATGGGAATCAGGGCGATACTCTAAGAGGTTCTTCAGTCGGGGAAAAAGGTGCAGAACTCAGAAAACAAAGATCTTATATGCAACATGGTGCTGGACAGTTATCCCGGTATTCCAATTCCGTTGCAGTTCGAGGAGGTGGTTCGGGATTTGGGTGTGGTGGAGAAAGTAGTACTAATTCACATTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGTGAATCTTCAGAAAAGCATGAATGGTCCCACCATTTATTAGACAGGCCAAAGTCTTCATATAAGATAGATGATCAATCATCTGGAAAAGAGTCTGCTAGGAATTACGCTCCAAAAAAGAGGATTCACTATTCAGGGCCCTTGATGCCACATGGTGGAAACCTTGAAGAAATGTTAAGAGAGCACGAGAAACAAATCCAGCATGCTGTGCGCAAGGCTCGTATAGACAAAGCTAAGACAAAAAAGACGTACGATGACAAAGGTATATCGGAATCGTTGCTTCACCATGCAAGAAATGGCAATTGA | 1632 | 45.1 | MDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAATPGIKFTESQIKCYMQQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPSSALALLDVLLAVEPDGRGTASSALQSEFFTTKPLPADPSTLPKYPPSKEFDAKLRDEETRRRRAPISVAREYEAARKFPRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNPEEGGGSGFRIEPPKEATQTQPNVSGSSRNMNGNQGDTLRGSSVGEKGAELRKQRSYMQHGAGQLSRYSNSVAVRGGGSGFGCGGESSTNSHWPEECFNVSYNHFNGGESSEKHEWSHHLLDRPKSSYKIDDQSSGKESARNYAPKKRIHYSGPLMPHGGNLEEMLREHEKQIQHAVRKARIDKAKTKKTYDDKGISESLLHHARNGN | 543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 50234928 | 50241848 | + | Tan0008647.2 | Tan11g2117 | 769054 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g2117 | 543 | MobiDBLite | consensus disorder prediction | 268 | 288 | - | - | |
Tan11g2117 | 543 | ProSiteProfiles | Protein kinase domain profile. | 1 | 249 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g2117 | 543 | MobiDBLite | consensus disorder prediction | 349 | 376 | - | - | |
Tan11g2117 | 543 | MobiDBLite | consensus disorder prediction | 504 | 543 | - | - | |
Tan11g2117 | 543 | FunFam | Putative serine threonine-protein kinase | 9 | 52 | - | - | |
Tan11g2117 | 543 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 52 | - | - | |
Tan11g2117 | 543 | MobiDBLite | consensus disorder prediction | 504 | 535 | - | - | |
Tan11g2117 | 543 | SMART | serkin_6 | 1 | 249 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g2117 | 543 | MobiDBLite | consensus disorder prediction | 251 | 288 | - | - | |
Tan11g2117 | 543 | Gene3D | Transferase(Phosphotransferase) domain 1 | 53 | 288 | - | - | |
Tan11g2117 | 543 | FunFam | probable serine/threonine-protein kinase At1g54610 | 48 | 289 | - | - | |
Tan11g2117 | 543 | MobiDBLite | consensus disorder prediction | 317 | 335 | - | - | |
Tan11g2117 | 543 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 255 | IPR011009 | - | |
Tan11g2117 | 543 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 85 | 97 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan11g2117 | 543 | PANTHER | CELL DIVISION PROTEIN KINASE | 9 | 249 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Tan11g2117 | 543 | MobiDBLite | consensus disorder prediction | 317 | 401 | - | - | |
Tan11g2117 | 543 | Pfam | Protein kinase domain | 9 | 249 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g2117 | Tan-Chr11:50234928 | Tan01g5156 | Tan-Chr1:116724088 | 6.90E-37 | dispersed | |
Tan11g2116 | Tan-Chr11:50229547 | Tan11g2117 | Tan-Chr11:50234928 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68231 | PF00069 | Pkinase | 2.60E-56 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g2117 | - | - | - | 0.0 |