Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2117 ATGGATCCTGAAAGTGTTCGTTTCATGGCCAGGGAGATCCTCATCCTGCGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATTACTTCAAGGGTATCTGGCAGTCTATACCTCATATTTGAGTACATGGAACATGATCTTGCAGGGTTGGCAGCAACCCCAGGGATCAAGTTCACTGAATCGCAGATAAAATGCTATATGCAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCCCAGGGAGTTTTGCACCGTGACATCAAGGGATCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGACAAAAGCAACCCCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCGCCGGAGCTTTTGCTTGGTGCGACGGACTATGGAGTATCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAATTGTATGCTGGGAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACATAAGATCTTCAAACTTTGTGGCTCCCCTTCTGAAGAGTACTGGAAAAAATCAAAATTACCTCATGCTACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTCCCTTCCTCTGCATTGGCCCTTTTGGATGTACTTCTTGCAGTTGAACCTGATGGCCGTGGCACAGCTTCCTCTGCCCTTCAAAGCGAGTTCTTTACCACAAAACCTCTTCCCGCGGATCCCTCTACTTTGCCAAAGTACCCACCAAGCAAGGAGTTCGATGCCAAGCTTCGAGACGAGGAAACTCGAAGAAGAAGAGCTCCTATCAGTGTGGCACGTGAATATGAAGCAGCTCGAAAGTTTCCCAGAGAATCTAAAGCGATTCCTGCACCAGATGCAAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGACAGCAAAATCCTACAAGTGTTAGTGAAAAGTATAATCCTGAAGAGGGCGGAGGTTCTGGCTTTCGCATTGAGCCCCCCAAAGAAGCAACACAAACTCAACCGAATGTCTCGGGTTCTTCACGAAACATGAATGGGAATCAGGGCGATACTCTAAGAGGTTCTTCAGTCGGGGAAAAAGGTGCAGAACTCAGAAAACAAAGATCTTATATGCAACATGGTGCTGGACAGTTATCCCGGTATTCCAATTCCGTTGCAGTTCGAGGAGGTGGTTCGGGATTTGGGTGTGGTGGAGAAAGTAGTACTAATTCACATTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGTGAATCTTCAGAAAAGCATGAATGGTCCCACCATTTATTAGACAGGCCAAAGTCTTCATATAAGATAGATGATCAATCATCTGGAAAAGAGTCTGCTAGGAATTACGCTCCAAAAAAGAGGATTCACTATTCAGGGCCCTTGATGCCACATGGTGGAAACCTTGAAGAAATGTTAAGAGAGCACGAGAAACAAATCCAGCATGCTGTGCGCAAGGCTCGTATAGACAAAGCTAAGACAAAAAAGACGTACGATGACAAAGGTATATCGGAATCGTTGCTTCACCATGCAAGAAATGGCAATTGA 1632 45.1 MDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAATPGIKFTESQIKCYMQQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPSSALALLDVLLAVEPDGRGTASSALQSEFFTTKPLPADPSTLPKYPPSKEFDAKLRDEETRRRRAPISVAREYEAARKFPRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNPEEGGGSGFRIEPPKEATQTQPNVSGSSRNMNGNQGDTLRGSSVGEKGAELRKQRSYMQHGAGQLSRYSNSVAVRGGGSGFGCGGESSTNSHWPEECFNVSYNHFNGGESSEKHEWSHHLLDRPKSSYKIDDQSSGKESARNYAPKKRIHYSGPLMPHGGNLEEMLREHEKQIQHAVRKARIDKAKTKKTYDDKGISESLLHHARNGN 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 50234928 50241848 + Tan0008647.2 Tan11g2117 769054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2117 543 MobiDBLite consensus disorder prediction 268 288 - -
Tan11g2117 543 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2117 543 MobiDBLite consensus disorder prediction 349 376 - -
Tan11g2117 543 MobiDBLite consensus disorder prediction 504 543 - -
Tan11g2117 543 FunFam Putative serine threonine-protein kinase 9 52 - -
Tan11g2117 543 Gene3D Phosphorylase Kinase; domain 1 2 52 - -
Tan11g2117 543 MobiDBLite consensus disorder prediction 504 535 - -
Tan11g2117 543 SMART serkin_6 1 249 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2117 543 MobiDBLite consensus disorder prediction 251 288 - -
Tan11g2117 543 Gene3D Transferase(Phosphotransferase) domain 1 53 288 - -
Tan11g2117 543 FunFam probable serine/threonine-protein kinase At1g54610 48 289 - -
Tan11g2117 543 MobiDBLite consensus disorder prediction 317 335 - -
Tan11g2117 543 SUPERFAMILY Protein kinase-like (PK-like) 4 255 IPR011009 -
Tan11g2117 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g2117 543 PANTHER CELL DIVISION PROTEIN KINASE 9 249 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan11g2117 543 MobiDBLite consensus disorder prediction 317 401 - -
Tan11g2117 543 Pfam Protein kinase domain 9 249 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g2117 Tan-Chr11:50234928 Tan01g5156 Tan-Chr1:116724088 6.90E-37 dispersed
Tan11g2116 Tan-Chr11:50229547 Tan11g2117 Tan-Chr11:50234928 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68231 PF00069 Pkinase 2.60E-56 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2117 - - - 0.0