Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2173 ATGAAAGCCGAAAAGAGTTGGTGCTTTCCATGTATTTTTTTCGTTGTTTTAATTTCATATTTCTTTTCAACCTTTTGCTTTGAAACAAATACAATCACACCAACGAATTTCATCACAGACCCTGAAATTATAACATCGAATGAAAGTTCTTCTTTCCAGTTGGGGTTCTTCTCACCTCTTAATTCTACAAGGCGATATGTTGGAATTTGGTTCACCAAATATCCTCCTCAAACTATAGTATGGGTAGCCAACAGAGACAGCCCTCTCAATAATAAAACTTCAGCTGGGATTTTCAAAGTCTCCAAGAATGGGAATCTGGTCGTGTTAGATGGAAACGACGTCGTCCTTTGGTCTTCAAATGTTTCTTCTTCATCTTTAGGAGCAAACACAAGCGCGGTTCTTTTAGATACAGGTAACCTTATTTTGAAAGATACTGCTTCTGGGGAAATTAAATGGGAGAGTTTCAAACACCCTTGTGATAAATTTTTGCCTCCCATGAATATTGTAACAAACACAAGAACCAAAGAGAAGGACATGATTACTTCATGGAATAGCCCTTCAGATCCATCTTCAGGTAACTTTTTTGCTGGTTTAGAAGTAGTCAATATTCCTGAAGCTGTGATTTGGAATGGGCCTAATAATATTTATTGGCGATCTGGCCCATGGAATGGTCAATCTTTTATGGGAATACCTGATATGGATTCTAGCTATCTCTCTGGCTATAATTTGGGTATCGATCACAATACTTACACTTTGTCGTTTGCTAATAACAATTATCAAACTAAAAGAATTGTCTACTTAAATTTGAACTCAAGTGGGAATCTTGAACAAATGTCTTTGGATGATGAAGATGAGAAATGGTACGTTGGTTGGTCGGCTCTTCAAACGCAGTGTGATTACTATGGCTTTTGTGGGGCATTTGGGATCTGTAATGCAAAACCTTCTCCTAATAATAATAATCCTATGATTTGCAGTTGTATAAAAGGGTTTAAGCCAAAGAAAGAAGAGGAGTGGAATCGAGGAAATTGGAGTGGTGGATGTGTTAGAAACACGCCACTCAAATGTGAGAATTTGAACAACGCTGACACTAAGGAAGAAGAAGAAGATGGGTTTGTTCATTTGGAAATGGTTAAAGTTCCATTTTTTGCAGAGTGGTCCAATTCATCTTTTTCAATAGAGGATTGCAAGCGTGAGTGCATCCAAAATTGTTCATGTACGGCTTATGCATACGACAATGGTCTTCGTTGCATGCTATGGAATAACCACTTAATTGATATACAAAAGTTTGAAACTGGTGGAGCTCATCTATACATTCGGTTGGCAGATAAAGACTTAGATAAAGGACAAGACAAGAAAAAAATCATAGTAGCCATAGTGCTACCAACAACGCTTATCATCTTCATCATTGCCATATACTTTTGGTGGAGACAAGGTAAATGGGGAAAAACTATCTCATCTACCAAAAAAGAAGATGTTTTGAAGTTGATGAGGAATGAGATGATTGGGGACAAAATTAAACTCGAGGAGTTACCTATTTATGATTTTGAGAAGCTAGCAATCGCAACTCAAAATTTTGATGCAAGTAACAAGCTTGGACAGGGCGGTTTTGGTCCAGTATATAAGGGACAATTTTTAGATGGACAGGAAATAGCAATCAAGAGACTTTCGAAGGCTTCTAACCAAGGGTATGAAGAATTTACCAATGAAGTGATAGTGATTTCAAAACTACAACATAGAAATCTTGTGCGGCTCCTTGGTTGTTGCATTGAAGGAGAAGAGAAGATGTTAATATATGAGTATATGCCCAACTTAAGTTTAGACGCATTCATCTTTGACTCTATCAAACGGAAGCTCTTAGATTGGAGAAAAAGGTTTGTTATTATTGATGGAATTGCTCGAGGACTCCTTTATCTTCATAGAGATTCGAGATTGAGAATTATTCATAGAGATCTAAAGGCAAGTAATATTCTGTTAGACGAAGATATGAATCCCAAAATTTCAGACTTTGGCATGGCAAGAATTTTTTGTGGTAATGAAGTGCAAGCTAATACTTCAAGGGTAGTTGGAACCTACGGATATATGTCACCGGAATATGCAATGCAGGGTCACTTTTCGGAGAAATCCGATGTCTTTAGTTTCGGAGTTTTGTTACTTGAGATTATAAGTGGTAAAAGGAATACTGGGTTCTACCGCAATGAACATGCTATAAGCTTATTGGAATTGGCATGGAAGTTATGGGTTGAAGATAATCTTATTTCTTTTATGGATCAAACAATAAATGAATTGTGTTGTCAATCAGAGATTCTAAGGTGCATCCAAGTGGGACTCTTATGTATTGAAGAATCTATAAATGATAGACCAAATGTGTCTACCATTATTTCAATGATCAACAGCGAAATTGTAGACCTTCCTATTCCAAAGCAACCGAGCTTTATTGGCAAACAACTCCAAAATAACGCAAAGATATCTCAACAATGCCTAAATAAATATTCTACACCAAAAAGTCTTAATCCTTTTAGAACAAGGAATTCTAATCCTTTTAGAAAAAAAAAAACCCTAAACAAACAGAAATCCTAA 2577 36.48 MKAEKSWCFPCIFFVVLISYFFSTFCFETNTITPTNFITDPEIITSNESSSFQLGFFSPLNSTRRYVGIWFTKYPPQTIVWVANRDSPLNNKTSAGIFKVSKNGNLVVLDGNDVVLWSSNVSSSSLGANTSAVLLDTGNLILKDTASGEIKWESFKHPCDKFLPPMNIVTNTRTKEKDMITSWNSPSDPSSGNFFAGLEVVNIPEAVIWNGPNNIYWRSGPWNGQSFMGIPDMDSSYLSGYNLGIDHNTYTLSFANNNYQTKRIVYLNLNSSGNLEQMSLDDEDEKWYVGWSALQTQCDYYGFCGAFGICNAKPSPNNNNPMICSCIKGFKPKKEEEWNRGNWSGGCVRNTPLKCENLNNADTKEEEEDGFVHLEMVKVPFFAEWSNSSFSIEDCKRECIQNCSCTAYAYDNGLRCMLWNNHLIDIQKFETGGAHLYIRLADKDLDKGQDKKKIIVAIVLPTTLIIFIIAIYFWWRQGKWGKTISSTKKEDVLKLMRNEMIGDKIKLEELPIYDFEKLAIATQNFDASNKLGQGGFGPVYKGQFLDGQEIAIKRLSKASNQGYEEFTNEVIVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNLSLDAFIFDSIKRKLLDWRKRFVIIDGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGMARIFCGNEVQANTSRVVGTYGYMSPEYAMQGHFSEKSDVFSFGVLLLEIISGKRNTGFYRNEHAISLLELAWKLWVEDNLISFMDQTINELCCQSEILRCIQVGLLCIEESINDRPNVSTIISMINSEIVDLPIPKQPSFIGKQLQNNAKISQQCLNKYSTPKSLNPFRTRNSNPFRKKKTLNKQKS 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 56792933 56797699 + Tan0014609.1 Tan11g2173 769110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2173 858 Pfam Protein tyrosine and serine/threonine kinase 528 792 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g2173 858 ProSiteProfiles Protein kinase domain profile. 525 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2173 858 ProSiteProfiles Bulb-type lectin domain profile. 29 155 IPR001480 -
Tan11g2173 858 Pfam D-mannose binding lectin 78 183 IPR001480 -
Tan11g2173 858 CDD PAN_AP_plant 351 441 - -
Tan11g2173 858 SMART serkin_6 525 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g2173 858 Gene3D Transferase(Phosphotransferase) domain 1 601 802 - -
Tan11g2173 858 Pfam S-locus glycoprotein domain 217 333 IPR000858 GO:0048544(InterPro)
Tan11g2173 858 ProSiteProfiles PAN/Apple domain profile. 355 441 IPR003609 -
Tan11g2173 858 MobiDBLite consensus disorder prediction 844 858 - -
Tan11g2173 858 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 23 809 - -
Tan11g2173 858 PIRSF SRK 2 846 IPR024171 GO:0004674(InterPro)
Tan11g2173 858 CDD B_lectin 35 158 IPR001480 -
Tan11g2173 858 Gene3D - 25 156 IPR036426 -
Tan11g2173 858 SUPERFAMILY Protein kinase-like (PK-like) 507 795 IPR011009 -
Tan11g2173 858 Gene3D Phosphorylase Kinase; domain 1 501 600 - -
Tan11g2173 858 CDD STKc_IRAK 531 797 - -
Tan11g2173 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 155 - -
Tan11g2173 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 491 600 - -
Tan11g2173 858 MobiDBLite consensus disorder prediction 833 858 - -
Tan11g2173 858 Pfam PAN-like domain 366 426 IPR003609 -
Tan11g2173 858 SMART ntp_6 366 440 IPR003609 -
Tan11g2173 858 SMART blect_4 35 158 IPR001480 -
Tan11g2173 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g2173 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 224 IPR036426 -
Tan11g2173 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 804 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2390 Tan-Chr3:77627159 Tan11g2173 Tan-Chr11:56792933 1.00E-157 dispersed
Tan05g3192 Tan-Chr5:83974399 Tan11g2173 Tan-Chr11:56792933 1.10E-174 dispersed
Tan05g3193 Tan-Chr5:83983092 Tan11g2173 Tan-Chr11:56792933 1.40E-179 dispersed
Tan05g3198 Tan-Chr5:84026423 Tan11g2173 Tan-Chr11:56792933 1.70E-230 dispersed
Tan05g3200 Tan-Chr5:84098265 Tan11g2173 Tan-Chr11:56792933 1.20E-240 dispersed
Tan05g3201 Tan-Chr5:84098265 Tan11g2173 Tan-Chr11:56792933 6.80E-145 dispersed
Tan05g3202 Tan-Chr5:84102478 Tan11g2173 Tan-Chr11:56792933 4.60E-49 dispersed
Tan06g0366 Tan-Chr6:2905665 Tan11g2173 Tan-Chr11:56792933 1.50E-120 dispersed
Tan11g2173 Tan-Chr11:56792933 Tan05g3151 Tan-Chr5:83512531 6.50E-106 dispersed
Tan11g2173 Tan-Chr11:56792933 Tan05g3199 Tan-Chr5:84034946 2.50E-299 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68232 PF07714 PK_Tyr_Ser-Thr 5.10E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2173 - - - 0.0