Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g2213 | ATGGAGCTGACTACTCAAGATCCTCCCATTCCCATTCCCATCCCTATTCCAATCCCTTTAAATAGTCGTTACGCCGGCCACGACCACGACCATCTCATCCACCACCACCACCATGACTCCTCCTCCACTCGCAACCACATCATTGCCGCTACAACTACAGTCAATGGTGGTAGTCCACTCCCAACCTCTCAAATGGAAGCGAATCTCCACCACCACCATAACAATAACAACAACAACAACAAAAAACATGTCAAATACAAAGAGTGTCTCAAAAACCACGCAGCCTCCATGGGAGGCAATGCCACGGATGGCTGCGGTGAGTTCATGCCAAGTGGAGAAGAAGGCTCTATTGAAGCCCTCACATGCTCCGCCTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGACGGGGAGCCTTACGATTGGCTCCACCACCCCTCGCGCCTTGGTCGCAAGCTCCTCGTCGGTGGGAAGAACATGATCGCCCCACCAGAAGCCACTGCATTCGCCTACCCGACTGCAGCAGGGGCAACGTTCCTATCATCCAGAGCACAACCTCACCACATGATAATGTCATACAACATGGTCGGTGGCGGGCACTCAGAGTCGGAGGAGCAGGAGGAGGCGGGCACCGGGAATAGGTCGTATTCAGGGCAAATGATGATGAATAAGAAGCGTTTCCGAACGAAGTTCACGGCGGAGCAGAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAGCAAGAGGAGAGTGTGGTGCAGCAATTCTGTCAAGAGATTGGAGTAAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAACAAGCACAATCTTGCCAAGAAGGAAACCATTTCCCCTTCCCATTCTCCCACTCCCTTAAATTAA | 903 | 50.72 | MELTTQDPPIPIPIPIPIPLNSRYAGHDHDHLIHHHHHDSSSTRNHIIAATTTVNGGSPLPTSQMEANLHHHHNNNNNNNKKHVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIDGEPYDWLHHPSRLGRKLLVGGKNMIAPPEATAFAYPTAAGATFLSSRAQPHHMIMSYNMVGGGHSESEEQEEAGTGNRSYSGQMMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKETISPSHSPTPLN | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 61205966 | 61207362 | - | Tan0002715.1 | Tan11g2213 | 769150 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g2213 | 300 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 86 | 135 | IPR006456 | - | |
Tan11g2213 | 300 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 85 | 136 | IPR006456 | - | |
Tan11g2213 | 300 | MobiDBLite | consensus disorder prediction | 58 | 81 | - | - | |
Tan11g2213 | 300 | NCBIfam | homeobox domain, ZF-HD class | 225 | 281 | IPR006455 | - | |
Tan11g2213 | 300 | MobiDBLite | consensus disorder prediction | 58 | 74 | - | - | |
Tan11g2213 | 300 | Pfam | ZF-HD protein dimerisation region | 84 | 136 | IPR006456 | - | |
Tan11g2213 | 300 | SUPERFAMILY | Homeodomain-like | 214 | 286 | IPR009057 | - | |
Tan11g2213 | 300 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 66 | 283 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Tan11g2213 | 300 | MobiDBLite | consensus disorder prediction | 199 | 218 | - | - | |
Tan11g2213 | 300 | Gene3D | - | 209 | 287 | - | - | |
Tan11g2213 | 300 | FunFam | Zinc-finger homeodomain protein 2 | 212 | 286 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2444 | Tan-Chr2:93022400 | Tan11g2213 | Tan-Chr11:61205966 | 7.70E-44 | dispersed | |
Tan03g1984 | Tan-Chr3:74903103 | Tan11g2213 | Tan-Chr11:61205966 | 1.00E-42 | dispersed | |
Tan05g2155 | Tan-Chr5:72287668 | Tan11g2213 | Tan-Chr11:61205966 | 3.10E-31 | dispersed | |
Tan07g1215 | Tan-Chr7:49924779 | Tan11g2213 | Tan-Chr11:61205966 | 4.90E-37 | dispersed | |
Tan11g0514 | Tan-Chr11:4353834 | Tan11g2213 | Tan-Chr11:61205966 | 3.80E-35 | dispersed | |
Tan11g2213 | Tan-Chr11:61205966 | Tan03g1814 | Tan-Chr3:73750807 | 1.10E-41 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28814 | PF04770 | ZF-HD_dimer | 3.00E-29 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g2213 | - | - | - | 0.0 |