Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2213 ATGGAGCTGACTACTCAAGATCCTCCCATTCCCATTCCCATCCCTATTCCAATCCCTTTAAATAGTCGTTACGCCGGCCACGACCACGACCATCTCATCCACCACCACCACCATGACTCCTCCTCCACTCGCAACCACATCATTGCCGCTACAACTACAGTCAATGGTGGTAGTCCACTCCCAACCTCTCAAATGGAAGCGAATCTCCACCACCACCATAACAATAACAACAACAACAACAAAAAACATGTCAAATACAAAGAGTGTCTCAAAAACCACGCAGCCTCCATGGGAGGCAATGCCACGGATGGCTGCGGTGAGTTCATGCCAAGTGGAGAAGAAGGCTCTATTGAAGCCCTCACATGCTCCGCCTGCAATTGTCATAGAAACTTCCATCGAAAAGAGATCGACGGGGAGCCTTACGATTGGCTCCACCACCCCTCGCGCCTTGGTCGCAAGCTCCTCGTCGGTGGGAAGAACATGATCGCCCCACCAGAAGCCACTGCATTCGCCTACCCGACTGCAGCAGGGGCAACGTTCCTATCATCCAGAGCACAACCTCACCACATGATAATGTCATACAACATGGTCGGTGGCGGGCACTCAGAGTCGGAGGAGCAGGAGGAGGCGGGCACCGGGAATAGGTCGTATTCAGGGCAAATGATGATGAATAAGAAGCGTTTCCGAACGAAGTTCACGGCGGAGCAGAAGGAGAAGATGCTGAGGTTTGCAGAGAAAGTTGGATGGAAGATTCAGAAGCAAGAGGAGAGTGTGGTGCAGCAATTCTGTCAAGAGATTGGAGTAAAGAGGAGAGTTCTTAAGGTTTGGATGCATAACAACAAGCACAATCTTGCCAAGAAGGAAACCATTTCCCCTTCCCATTCTCCCACTCCCTTAAATTAA 903 50.72 MELTTQDPPIPIPIPIPIPLNSRYAGHDHDHLIHHHHHDSSSTRNHIIAATTTVNGGSPLPTSQMEANLHHHHNNNNNNNKKHVKYKECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEIDGEPYDWLHHPSRLGRKLLVGGKNMIAPPEATAFAYPTAAGATFLSSRAQPHHMIMSYNMVGGGHSESEEQEEAGTGNRSYSGQMMMNKKRFRTKFTAEQKEKMLRFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKETISPSHSPTPLN 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 61205966 61207362 - Tan0002715.1 Tan11g2213 769150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2213 300 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 86 135 IPR006456 -
Tan11g2213 300 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 85 136 IPR006456 -
Tan11g2213 300 MobiDBLite consensus disorder prediction 58 81 - -
Tan11g2213 300 NCBIfam homeobox domain, ZF-HD class 225 281 IPR006455 -
Tan11g2213 300 MobiDBLite consensus disorder prediction 58 74 - -
Tan11g2213 300 Pfam ZF-HD protein dimerisation region 84 136 IPR006456 -
Tan11g2213 300 SUPERFAMILY Homeodomain-like 214 286 IPR009057 -
Tan11g2213 300 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 66 283 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER)
Tan11g2213 300 MobiDBLite consensus disorder prediction 199 218 - -
Tan11g2213 300 Gene3D - 209 287 - -
Tan11g2213 300 FunFam Zinc-finger homeodomain protein 2 212 286 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2444 Tan-Chr2:93022400 Tan11g2213 Tan-Chr11:61205966 7.70E-44 dispersed
Tan03g1984 Tan-Chr3:74903103 Tan11g2213 Tan-Chr11:61205966 1.00E-42 dispersed
Tan05g2155 Tan-Chr5:72287668 Tan11g2213 Tan-Chr11:61205966 3.10E-31 dispersed
Tan07g1215 Tan-Chr7:49924779 Tan11g2213 Tan-Chr11:61205966 4.90E-37 dispersed
Tan11g0514 Tan-Chr11:4353834 Tan11g2213 Tan-Chr11:61205966 3.80E-35 dispersed
Tan11g2213 Tan-Chr11:61205966 Tan03g1814 Tan-Chr3:73750807 1.10E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28814 PF04770 ZF-HD_dimer 3.00E-29 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2213 - - - 0.0