Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g2226 ATGGATGAAAATGGTGGGATGAAGTTAACTGGACTCCGCCAGATTGTGAAGCTGAAAGAGACTCTCCAACACTGGCAAGCTGTGACAGTTAACCAGAAATCCAAAGCATTCCATGAAAAACAAAAACAAAATCAAAATCAAAATCAAAATCATAATCATAATCATGGGATCCTTTCACCGGCAATCAACAAAAGGCTGACGAATGTGTTGTGTTGTGATTCGGATGAAGAGAGCTGCCCGAGCCCTGAACATCCACCGGATGTCCCAAAAGGGTATTTGGCTGTTTATGTTGGGCCCGAGCTTCGAAGGTTTATCATTCCCACCAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTTGAACATGGCGGCGGGCTTACATTCCCATGCGAGATTGAGACCTTCAAATACCTTCTCAAGTGCATGGAGAGCCAGCAGAAGGATCATCCTGATGACCACACCCCAGCTGGGAGTTCTTTAATCATGGAAGGATAA 522 45.4 MDENGGMKLTGLRQIVKLKETLQHWQAVTVNQKSKAFHEKQKQNQNQNQNHNHNHGILSPAINKRLTNVLCCDSDEESCPSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFEHGGGLTFPCEIETFKYLLKCMESQQKDHPDDHTPAGSSLIMEG 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 61917934 61919741 + Tan0010972.1 Tan11g2226 769163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g2226 173 MobiDBLite consensus disorder prediction 41 57 - -
Tan11g2226 173 MobiDBLite consensus disorder prediction 33 57 - -
Tan11g2226 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 151 IPR003676 GO:0009733(InterPro)
Tan11g2226 173 Pfam Auxin responsive protein 55 150 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3762 Tan-Chr1:102422479 Tan11g2226 Tan-Chr11:61917934 1.80E-17 dispersed
Tan02g2054 Tan-Chr2:90020689 Tan11g2226 Tan-Chr11:61917934 2.80E-14 dispersed
Tan03g0175 Tan-Chr3:29197888 Tan11g2226 Tan-Chr11:61917934 8.40E-11 dispersed
Tan03g1223 Tan-Chr3:68473866 Tan11g2226 Tan-Chr11:61917934 9.70E-17 dispersed
Tan08g1705 Tan-Chr8:68753401 Tan11g2226 Tan-Chr11:61917934 1.20E-13 dispersed
Tan11g2226 Tan-Chr11:61917934 Tan11g2228 Tan-Chr11:61918421 6.50E-90 dispersed
Tan11g2226 Tan-Chr11:61917934 Tan11g2227 Tan-Chr11:61917934 6.50E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g2226 K14488 - csv:101207913 273.092