Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g2250 | ATGGTGTTCCAAGATTTCGACCAAATCTCCGAACGCCGACGTGCGGAGAGAGCACGCAAATTCCGACAGAGGGTGATCATCGGTGTGGTTTCGGCGACGGTGATCCTTGTAGTAGTAGCGGGGGCGGTGTTCATGCAAGTTTCGTCTTCGGCGAAATCAAGCAGCGACAAAGAGAGTGGCAGTAGCAATAATGGGAACTCGAAACAAGGTGATACACCAGACACGAAACAGGTATCCCGCGTGGAGAAAATGATTGTGATGATATGCAACTCCACAGAGTATAAAGGCAAATGCGAGAGCACTTTGAAGGATGGGGTCCACACCGATCCAAACTCCTCTGACCCTAAAGACCTTATAAAGCTGGCGATCTCTGCAGCGGCTACGGAGGTTAAATCGGCGGTCAAAAAAGCGAGCGGGTTCAACTTCGGAAGCCCTGAGGAAAAAGGTGCATTCGAAGACTGCAAGGTGCTTTTGGAAGACGCGGTTGAGGAATTAGAGAATTCTGTGAGCGAAGTGAGCAAGAAGAATCTAGGAAAGCTGACTTCCAAAACGACGCCGGATCTGAACAACTGGCTGAGCGCTGTGATGTCTTATCATGAAACTTGCGTAGATGGATTTCCAGATGGGAAGATGAAGATTGAAATGGAGAACGCAGTGAAGGCTGGTAAGGAACTAACGAGTAATTCTTTGGCCATGATTTCGCAGGTTTCTTCCTTCTTCTCTACGTTTGACATTCCTGATGGGGAAGGAGCTGCAACACGACGTCGTCTAATGGCCATGGGTAAAGATGCTATTCCTACTTGGATGAGCAGCAACGAAAGGAGGATTTTGAAGAGCGCTACGGCTGGGGATAAGCCTAAGCCTAATGTTGTGGTTGCCAAAGATGGGTCTGGAGATTTCAAAACTATTAACGAAGCCTTGAGTAAGATGCCTGACAAATATGATGGGCGGTACGTGATCTATATTAAGGAAGGGATCTACGAGGAGACAGTGGTAATTACGAAAAAGATGGTGAATGTTACAATGTACGGAGATGGATCTCAGAAGAGCATGATCAGTGGGAGCAAGAACTTTGTGGACGGTGTTAGAACCTTCCAGACGGCAACATTTGTGGCACTTGGAGACGGGTTCCTGGGTCAAGCCATTGGATTCCGAAACACTGCAGGTCCAGAAAAGCACCAAGCGGTGGCGGCCAGAGTCCAAGCAGATCGAGCCATATTCGTGAACTGTCGGTTCGAGGGGTACCAAGACACGTTATACGCCCAAGCCCATCGTCAGTTCTACAGAAGCTGTTTGATAACAGGAACAATCGACTTCATATTCGGAGACGCTGCAGCCATTTTCCAAAACTGCAACATGATGATTCGAAAGCCATTAGACAACCAACAAAACATAGTAACAGCACAAGGGCGAACCGACAAACATGAAACCACAGGCATAGTTATTCAAAACTGCAAGATTTTACCGGATAAGAGTCTTGAACCTGTTAAGGCCCAGTTCAAAAGCTACTTGGGTAGGCCTTGGAAAGAGTTTTCTAGAACCATTGTCATGGAGTCCACAATTGAAGATATCATTCATCCTGATGGTTGGATGCCTTGGGAAGGGGATTTTGCACTCAAAACCTTGTACTATGCTGAATTTAACAACGAAGGCCCTGGGTCTAAGACCGATGCCAGAGTCAAATGGCCTGGTTACAAGCTCATTGATAAGGAAGAGGCTGCAAAGTTTACAATAGGAACTTTTCTAGAGCTGGATTGGATCGAGAGCTCGGCCGTTCCTGTTCATGCCGGCCTATTTTGA | 1800 | 47.22 | MVFQDFDQISERRRAERARKFRQRVIIGVVSATVILVVVAGAVFMQVSSSAKSSSDKESGSSNNGNSKQGDTPDTKQVSRVEKMIVMICNSTEYKGKCESTLKDGVHTDPNSSDPKDLIKLAISAAATEVKSAVKKASGFNFGSPEEKGAFEDCKVLLEDAVEELENSVSEVSKKNLGKLTSKTTPDLNNWLSAVMSYHETCVDGFPDGKMKIEMENAVKAGKELTSNSLAMISQVSSFFSTFDIPDGEGAATRRRLMAMGKDAIPTWMSSNERRILKSATAGDKPKPNVVVAKDGSGDFKTINEALSKMPDKYDGRYVIYIKEGIYEETVVITKKMVNVTMYGDGSQKSMISGSKNFVDGVRTFQTATFVALGDGFLGQAIGFRNTAGPEKHQAVAARVQADRAIFVNCRFEGYQDTLYAQAHRQFYRSCLITGTIDFIFGDAAAIFQNCNMMIRKPLDNQQNIVTAQGRTDKHETTGIVIQNCKILPDKSLEPVKAQFKSYLGRPWKEFSRTIVMESTIEDIIHPDGWMPWEGDFALKTLYYAEFNNEGPGSKTDARVKWPGYKLIDKEEAAKFTIGTFLELDWIESSAVPVHAGLF | 599 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 63415248 | 63417047 | - | Tan0002306.1 | Tan11g2250 | 769187 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g2250 | 599 | MobiDBLite | consensus disorder prediction | 51 | 77 | - | - | |
Tan11g2250 | 599 | NCBIfam | pectinesterase inhibitor domain | 81 | 236 | IPR006501 | GO:0004857(InterPro) | |
Tan11g2250 | 599 | PANTHER | PECTINESTERASE | 27 | 589 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Tan11g2250 | 599 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 81 | 237 | IPR035513 | - | |
Tan11g2250 | 599 | Pfam | Plant invertase/pectin methylesterase inhibitor | 84 | 232 | IPR006501 | GO:0004857(InterPro) | |
Tan11g2250 | 599 | Coils | Coil | 155 | 175 | - | - | |
Tan11g2250 | 599 | Gene3D | - | 283 | 598 | IPR012334 | - | |
Tan11g2250 | 599 | Pfam | Pectinesterase | 289 | 583 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Tan11g2250 | 599 | CDD | PMEI-like_3 | 88 | 238 | - | - | |
Tan11g2250 | 599 | SUPERFAMILY | Pectin lyase-like | 286 | 583 | IPR011050 | - | |
Tan11g2250 | 599 | FunFam | Pectinesterase | 283 | 598 | - | - | |
Tan11g2250 | 599 | FunFam | Pectinesterase | 81 | 237 | - | - | |
Tan11g2250 | 599 | ProSitePatterns | Pectinesterase signature 2. | 433 | 442 | IPR033131 | - | |
Tan11g2250 | 599 | SMART | PMEI_2 | 80 | 232 | IPR006501 | GO:0004857(InterPro) | |
Tan11g2250 | 599 | MobiDBLite | consensus disorder prediction | 51 | 74 | - | - | |
Tan11g2250 | 599 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 83 | 237 | IPR035513 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g1033 | Tan-Chr10:9186330 | Tan11g2250 | Tan-Chr11:63415248 | 1.20E-137 | dispersed | |
Tan11g0483 | Tan-Chr11:4077134 | Tan11g2250 | Tan-Chr11:63415248 | 1.30E-43 | dispersed | |
Tan11g1660 | Tan-Chr11:16026391 | Tan11g2250 | Tan-Chr11:63415248 | 2.30E-115 | dispersed | |
Tan11g1757 | Tan-Chr11:18067381 | Tan11g2250 | Tan-Chr11:63415248 | 9.60E-108 | dispersed | |
Tan11g2250 | Tan-Chr11:63415248 | Tan06g2699 | Tan-Chr6:79431027 | 2.60E-138 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g2250 | - | - | - | 0.0 |