Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g159 ATGGGGAAGGGTTCCAAGAGCAATTGCAAGTCGGCGTCCCACAAGATGTTCAAGGACAAGGCCAAGAACCGTGTTGATGATCTACAGGGGATGTTCACGGATCTGCAGTCTGCGAGGAAGGAGAGCCGATCGGTGGATGTCGCGGTCCTTGAGGAGCAGCTTCATCAGATGCTTCGTGAGTGGAAAGCCGAACTCAACGAACCCTCTCCCGCATCTTCTCTACAAGGCGGTAGTCTGGGGTCGTTTTCCTCGGACATTTGCCGGCTGTTGCAGCTTTGTGAAGAGGAGGACGATGCCACTAGTGCGTTAGCTGATGGGGCAGTGCCCAAACCTGAGCCTGATGCTCAAGGCCATCAAATTGGAGCTAGTGTGCTTTTCCAAGAGCGCTATAATAAGGGCCCACAGGAGCATGGCTTTCAATTGGTGGATCAATGCAAAATTTCTCCTTCAGGTGCTCACAATATGGGAGTTCACAATTTGGAAGGAGCTACTCAGTTGGACTATCGTCAGTTTGATTTGCAACAAGACTTTGAGCAAAACTTCTTTGCTGGTTATGATGGGACTGGTCTGTGTGGAGAGGATGCTATGCCTCATATTTCTAGCTTTTTGCCAAGTATTTGCCTTCCACCTTCTGCATTCTTGGGGCCAAAATGTGCACTCTGGGATTGCCCCAGGCCAGCTCAAGGGATGGATTGGTGTCAAAACTATTGCAGCAGCTTTCATGCTACTCTGGCATTGAGTGAAGGCCCTCCTGGTATGACCCCAGTTCTACGACCTGGGGGCATAGGCCTGAAGGATGGTCTGCTTTTTGCTGCTCTTAGTGCAAAGGTGCAAGGAAAAGATGTTGGTATCCCAGAATGTGAAGGGGCTGCAACTGCAAAATCCCCATGGAATGCTCCTGAGCTATTTGATCTGTCAGTTCTTGAGGGTGAAACAATTAGGGAATGGCTTTTTTTTGACAAGCCTCGAAGAGCATTTGAGAGTGGAAATAGAAAGCAGAGGTCATTGCCAGATTATAGTGGGCGTGGTTGGCATGAGTCAAGGAAGCAAGTGATGAATGAATATGGGGGACTGAAAAGATCTTACTACATGGATCCGCAACCTCTGAACCATTTTGAGTGGCACCTTTATGAATATGAAATCAGTAAGTGTGATGCTTGTGCCTTGTATAGGTTGGAACTGAAGCTTGTTGATGGGAAGAAGAGTTCCAAAGCAAAAGCAACAACTGATTCAGTGGCTGATCTGCAGAAGCAGATGGGAAGGCTTACTGCTGAGTTTCCCTTAGATAACAAGCGCTCTGTTAAAGGAAGGACAAAAATTAATATGAAGGATGGTGTTGGAGATGTTTATTCTACTCCAAATCGGGTAGGACCTCCAAATCAACAAGGTGATTATGGGGTAGGAGGACCTTACGATTATCTTGTGGAGAATTTAGGTGACTATTATTTGACATGA 1455 47.08 MGKGSKSNCKSASHKMFKDKAKNRVDDLQGMFTDLQSARKESRSVDVAVLEEQLHQMLREWKAELNEPSPASSLQGGSLGSFSSDICRLLQLCEEEDDATSALADGAVPKPEPDAQGHQIGASVLFQERYNKGPQEHGFQLVDQCKISPSGAHNMGVHNLEGATQLDYRQFDLQQDFEQNFFAGYDGTGLCGEDAMPHISSFLPSICLPPSAFLGPKCALWDCPRPAQGMDWCQNYCSSFHATLALSEGPPGMTPVLRPGGIGLKDGLLFAALSAKVQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKAKATTDSVADLQKQMGRLTAEFPLDNKRSVKGRTKINMKDGVGDVYSTPNRVGPPNQQGDYGVGGPYDYLVENLGDYYLT* 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1754173 1758300 + Vvi10g159 Vvi10g159 770758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g159 484 Coils Coil 18 38 - -
Vvi10g159 484 PANTHER TRANSCRIPTION FACTOR VOZ1 1 484 IPR039277 GO:0006355|GO:0048578
Vvi10g159 484 Coils Coil 405 425 - -
Vvi10g159 484 MobiDBLite consensus disorder prediction 1 20 - -
Vvi10g159 484 PANTHER TRANSCRIPTION FACTOR VOZ1 1 484 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g159 Vvi12g218 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13651 None None None None Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g159 - - vvi:100243518 990.334