Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g172 ATGTTCATGCTTCTCTCTTCCTTTTCTTCTTCTTCGTTTCTTCTCATTTCTTTCTTCTTTTTCCTTCTCTTCCTCCCCACCTCATACTCCTTAACCAAGCCCACTAATGCCACTCGCCGCCACCGCCAACTCTCCATCAACTACTACGCCACCTCCTGCCCGCAGCTTGAACAGCTTGTGGCTTCCGTCACCGCCCAGCAGTTCAAAGAAGCGCCCGTCTCAGGGCCCGCCACTATCCGGCTCTTCTTCCACGATTGCTTTGTTGAAGGGTGTGATGGGTCGATATTGATATCATCGAAGCCGGGAACTGGGGTGCTGGTGGAGAAGGATGCCTATGATAACAGGGACTTAGCAGCAGAAGCTTTTGAGAGCGTAAGGAAGGCCAAGGTATTGGTGGAGAGCAAGTGCCCTGGTGTTGTGTCCTGCGCTGACATTCTTGTCATTGCAGCCAGAGATTTTGTCCACCTGGCTGGGGGTCCTTACTATCAAGTGAAGAAAGGTAGGTGGGATGGAAAAATATCAAAGGCATCAAGAGTGAATTCCAATCTCCCTCGAGCGAATTCCACGGTTGATGAGCTGATTAAGCTGTTTAAATCCAAAGGACTAACAATGGAGGACCTTGTTGTTCTCTCAGGGGCACATACGATTGGCTTTGCCCACTGTGAGCACTTTGTGAACCGGCTCTACGATTATGGTGGTACAAAGCAGCCAGACTCTGCCATTGATCCAAGGCTCCTCAAGGCCTTAAAGATGTCGTGCCCTCGGTTTGGAGGGAATGCAGATATTGTCGCACCATTTGATGTCACCACCCCATTCACATTTGATAATGCATATTATGGGAACCTGGAGGCCAAACTGGGGTTGCTAGCCACAGACCAAGCTCTATTTTTGGACCCCAGGACCAAGCCCCTGGTGCAGGCCATGGGGAAGGACAGGCAGAAGTTCTTTCAAGAATTTGCAGCTGCCATGGAGAAGATGGGGTCAATAGGAGTGAAAAGGGGAAGAAGACATGGGGAGAAAAGGAAAGATTGTAGCATGCATATGTCAGTAAAATGTAATAAACCCAAAAAATAA 1074 49.07 MFMLLSSFSSSSFLLISFFFFLLFLPTSYSLTKPTNATRRHRQLSINYYATSCPQLEQLVASVTAQQFKEAPVSGPATIRLFFHDCFVEGCDGSILISSKPGTGVLVEKDAYDNRDLAAEAFESVRKAKVLVESKCPGVVSCADILVIAARDFVHLAGGPYYQVKKGRWDGKISKASRVNSNLPRANSTVDELIKLFKSKGLTMEDLVVLSGAHTIGFAHCEHFVNRLYDYGGTKQPDSAIDPRLLKALKMSCPRFGGNADIVAPFDVTTPFTFDNAYYGNLEAKLGLLATDQALFLDPRTKPLVQAMGKDRQKFFQEFAAAMEKMGSIGVKRGRRHGEKRKDCSMHMSVKCNKPKK* 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1869066 1872340 - Vvi10g172 Vvi10g172 770771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g172 357 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PANTHER PEROXIDASE 19 32 344 - -
Vvi10g172 357 PANTHER PEROXIDASE 25-RELATED 32 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 ProSiteProfiles Plant heme peroxidase family profile. 43 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Vvi10g172 357 Gene3D - 47 346 - -
Vvi10g172 357 Pfam Peroxidase 61 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 CDD secretory_peroxidase 43 345 IPR033905 GO:0004601|GO:0042744
Vvi10g172 357 Gene3D Peroxidase, domain 2 184 326 - -
Vvi10g172 357 MobiDBLite consensus disorder prediction 334 357 - -
Vvi10g172 357 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Vvi10g172 357 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g172 357 SUPERFAMILY Heme-dependent peroxidases 43 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g172 K00430 - vvi:100250264 661.759