Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g212 ATGGCATCCTCCAAAGACCGCGACACCTTCGTCTACGTCGCCAAGCTCGCCGAGCAAGCCGAGCGCTATGACGAAATGGTGGATTCCATGAAGAAAGTGGCGAAGCTGGACGTGGAATTGACCGTGGAGGAGCGGAACCTGCTCTCGGTTGGCTTTAAGAACGTGATCGGCGCTCGGAGGGCTTCCTGGAGGATTCTTTCATCGATCGAGCAGAAGGAGGAAGCTAAAGGGAACGATCAGAATGCGAAGCGGATCAAGGAGTACAGGCAAAAGGTAGAATCGGAGCTTTCCGGAATTTGCAGTGAAATTATGACTGTTATTGATGAGCATCTCATTCCATCTTCTTCGGCCGGTGAATCTACCGTTTTTTACTACAAAATGAAAGGCGACTATTATCGGTATTTGGCGGAGTTTAAGTCTGGCAACGAGAAGAAAGAGGCTGCTGATCAGTCACTGAAAGCTTATCAGACAGCTTCTACGACAGCAGAGGCTGATTTATCTCCCACACATCCCATTCGACTGGGTTTGGCCTTGAACTTCTCTGTTTTTTACTATGAAATTATGAACTCCCCTGAAAGGGCCTGCCACCTCGCAAAGCAAGCTTTTGATGAAGCTATCTCAGAGTTGGATACTCTGAATGAGGAGTCTTACAAGGATAGCACATTGATTATGCAACTTCTGAGGGACAACCTCACCTTGTGGACTACTGACATCCCAGGGGATGATGAAGAGAGCTGGAAGCTGGAAACCTCTGCTAGGGCTGGTGGGAATGAAAACGCAGAGGTAACTTTGGTTTTTGAAGTTTGTGGTGGTTTATATCTTTGGGTTTTTGACTTTTGTTCACATGGATTTCCATTATAA 861 47.04 MASSKDRDTFVYVAKLAEQAERYDEMVDSMKKVAKLDVELTVEERNLLSVGFKNVIGARRASWRILSSIEQKEEAKGNDQNAKRIKEYRQKVESELSGICSEIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSLKAYQTASTTAEADLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTTDIPGDDEESWKLETSARAGGNENAEVTLVFEVCGGLYLWVFDFCSHGFPL* 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2568209 2572117 + Vvi10g212 Vvi10g212 770811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g212 286 Coils Coil 13 33 - -
Vvi10g212 286 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 3 246 - -
Vvi10g212 286 SMART 1433_4 7 248 IPR023410 -
Vvi10g212 286 PIRSF 14-3-3 1 247 IPR000308 -
Vvi10g212 286 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Vvi10g212 286 Coils Coil 195 215 - -
Vvi10g212 286 Gene3D - 1 248 IPR036815 -
Vvi10g212 286 Pfam 14-3-3 protein 14 235 IPR023410 -
Vvi10g212 286 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Vvi10g212 286 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Vvi10g212 286 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Vvi10g212 286 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Vvi10g212 286 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Vvi10g212 286 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Vvi10g212 286 PANTHER 14-3-3 PROTEIN 3 246 IPR000308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g212 Vvi19g118 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g212 K06630 - vvi:100244643 513.842