Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g275 ATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGAGTTTATATCTCTCAAAGGGCAAGATCTTGCCAGTGTGCTTCCAACCTCTTTAGCGAAATTACCTTACCTTAAGACGATCATTTTTAGTGCTAACAATCTCATTGGGGAGTTGCCTCCATCACTTGCTAATCTAACCAAATTAATAGAATTCAGCGTTGAAGCCCAAGGTGGTCAGCTTCCTCGTGATGAAGAGGAGGCTCTAGAAGAAATAGCAGAACAAGTGGGGAAAAAGGATTGGAACTTCAGCCTAAACCCTTGTGATGGCAACTCCAACTGGTCCACACCTAACAGGAAGGAAATGCCATTGTATAACAATACTCTCACCTGCAATTGCTCCTATCCCAACGGTCAATGCCACGTCGTTCAGATATTTCTCAAAGGGCAAGATCTTGCTGGTGTGCTTCCGTCCTCTCTGGAAAAACTACCTTACCTTAAGATAATTGATTTCACTAGGAACTATCTTAGTGGTAACATACCGCGTGAATGGGCTTCTTTGCAATTAGAATATATGTCACTCACTGTGAACAAGTTATCAGGACCAATACCAAGCTTCTTGGGAAACATTTCTACTCTGAGATATATGAGTATGGAGAGCAACATGTTCTCTGGAACTGTTCCTCCTCAGCTTGGGCAACTGGTCAACTTGGAAAATCTCATTCTTAACACTAACAATCTCACTGGGGAGTTGCCTCCAGCACTTGCTAATCTAACCAAATTAACAGAATTTCGGATTAGTAGCAACAATTTCAGTGGAAAAATTCCCAATTTTATTCATAGTTGGAAACAACTTCAGAAATTAGAGATCCAAGCAAGTGGTCTTGAAGGGCCCATACCTTCTAGCATTTCTGTCTTGACGAATTTAACTGAATTAAGGATTAGTGATTTACTTGGGGAAGGCTCAAATTTTCCGCCTCTAGGAAACATGAAAGGCCTGAAAAAGCTGATGTTGAGAGGTTGTAATATCTCCGGATCAATCCCCAAATATTTAGCAGAGATGACAGAACTGCAAATTTTAGACCTTAGCTTCAACAAGCTGGAAGGAATTGTTCCAAACCTGGAAGGTTTAACACAAATAGAATTCATGTATTTGACAAGCAACATGCTAACTGGGTCTATTCCGGACTGGATCGAGAGCAGAAATAATCGCTACCAAACAGATATTTCTTATAATTACTTTTCCAAGCGCTCTATGCCATCTTCTTGTCGAGAAACCCTGAACTTGTTCCGAAGCTTTTCTGAAAGGGGAAAATTAGAATTTGATGAGTGCCTGGACAGTTTTCCATGTCTCAAAGATCAGTATTCACTGCATATAAATTGTGGTGGAGGAAGAACCATCATTGGAGACATAGTCTATGAAGCGGATGAAGACTTAGCAGGTCCATCCAAGTTTGTCCCCACTAGAGATAATTGGGGTTTTAGTAGCACAGGAGACTTTTGGGATCGTGACAGAACCACAAAAAATTATATAGCACATAATGTATCCATGCTCGGGATGAATGACTCTGAATTGTACACAAGAGCACGACTTTCTCCTCTATCTTACACTTACTATGGACGCTGCTTAGCAGATGGGAACTATACTGTGAAACTTCATTTTGCAGAGATAGTGATCAGAGGCAATAAATCCTTTCATAGTCTTGGAAGACGTATTTTTGATGTTTACATCCAGGAAAAGCTGGAGTTGCAAGATTTTAATATTGTACAAGCAGCACAAGGGGTTGATAAGGTAGTTGTAAGAGAATTTAAAGCAGTCGTAAGGAATAAGACTTTGGACATCCGATTTCATTGGGCTGGGAAAGGTACAACAGCTGCCCCAGAGGGAGGAACTTATGGTCCTCTCATATCAGCCATTTCTGTAAAAGCTGATTTTGAGCCACCTTCTGATGGAAAAAAGAAGATATTCATTGCAGTTGGGGCTGTGGCTGTGGCTTTGGTGTTATTCCTTATTTTAGGTATTCTTTGGTGGAAAGTTTGTTTTGGTGGCAGAATCTCCCGGGAACAAGAGTTGAGAGGATTAGATCTGCAAACTGGTTTATTTACCTTGAGACAAATTAAAGCTGCTACAAACAGCTTTGATGCTGCAAACAAGATTGGGGAAGGAGGTTTTGGTTCTGTCTACAAGGGTACATTATTAGATGGTACCATAATTGCAGTGAAGCAACTTTCCACCAAGTCAAAGCAAGGAAATCGTGAATTTGTGAATGAAATTGGAATGATTTCTGCTTTACAACACCCAAATCTTGTAAGATTATATGGATGTTGTGTTGAAGGAAATCAACTGATATTGGTATATGAATACATGGAGAACAATAGTCTCGCTCGGGCTTTATTTGGTCAAGTGGAATACCAATTAAATTTGGACTGGTCCACGAGGCAGAGGATTTGTGTTGGCATAGCAAGAGGTTTGGCTTTCCTGCATGAAGGATCAACACTGAAAATTGTTCATAGAGACATAAAAGCAAATAACATACTACTTGATACGAATCTTAACCCTAAGATCTCTGATTTTGGTCTGGCAAAACTTGATGAAGAAGACAACACCCATATTAGCACCAGAGTTGCTGGAACCATAGGATACATGGCACCAGAGTATGCATTATGGGGTTATTTAACCTATAAAGCCGATGTATACAGTTTTGGGGTTGTTGCTTTGGAACTTGTTGCAGGGAAGAACAACATGAAATATAGACCAAATGAGGATTGCTTTTGTCTTCTAGATTGGGCCTTTGTTTTACAACAAAAAGGAAATTTAATGGAGCTAGTGGATCCAAAGTTGGGGACTGAGTTCAAAAAGGACGAAGCCATAAGGATGATCAAAGTTGCCCTATTATGCACCAATCCATCTCCAGCACTTAGACCTACCATGTCTGCAGTGGTGAGCATGCTCAAAGGTCAAACTGTCATTCAGGAATACCCCCTGAATCCTAGTATTTATGGTGATGAATTTGGGTTTGAAGCCCTCAGAGGCCAGTATGACCAGATGCAATTACAGAGCTCAAGCGACATTGAGCCCCTCAATCATTCATCACATACAGCACAGAGTGGATCTTCCTTAACATCTTCCCAAGATCCATAA 5706 21.94 MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFISLKGQDLASVLPTSLAKLPYLKTIIFSANNLIGELPPSLANLTKLIEFSVEAQGGQLPRDEEEALEEIAEQVGKKDWNFSLNPCDGNSNWSTPNRKEMPLYNNTLTCNCSYPNGQCHVVQIFLKGQDLAGVLPSSLEKLPYLKIIDFTRNYLSGNIPREWASLQLEYMSLTVNKLSGPIPSFLGNISTLRYMSMESNMFSGTVPPQLGQLVNLENLILNTNNLTGELPPALANLTKLTEFRISSNNFSGKIPNFIHSWKQLQKLEIQASGLEGPIPSSISVLTNLTELRISDLLGEGSNFPPLGNMKGLKKLMLRGCNISGSIPKYLAEMTELQILDLSFNKLEGIVPNLEGLTQIEFMYLTSNMLTGSIPDWIESRNNRYQTDISYNYFSKRSMPSSCRETLNLFRSFSERGKLEFDECLDSFPCLKDQYSLHINCGGGRTIIGDIVYEADEDLAGPSKFVPTRDNWGFSSTGDFWDRDRTTKNYIAHNVSMLGMNDSELYTRARLSPLSYTYYGRCLADGNYTVKLHFAEIVIRGNKSFHSLGRRIFDVYIQEKLELQDFNIVQAAQGVDKVVVREFKAVVRNKTLDIRFHWAGKGTTAAPEGGTYGPLISAISVKADFEPPSDGKKKIFIAVGAVAVALVLFLILGILWWKVCFGGRISREQELRGLDLQTGLFTLRQIKAATNSFDAANKIGEGGFGSVYKGTLLDGTIIAVKQLSTKSKQGNREFVNEIGMISALQHPNLVRLYGCCVEGNQLILVYEYMENNSLARALFGQVEYQLNLDWSTRQRICVGIARGLAFLHEGSTLKIVHRDIKANNILLDTNLNPKISDFGLAKLDEEDNTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALELVAGKNNMKYRPNEDCFCLLDWAFVLQQKGNLMELVDPKLGTEFKKDEAIRMIKVALLCTNPSPALRPTMSAVVSMLKGQTVIQEYPLNPSIYGDEFGFEALRGQYDQMQLQSSSDIEPLNHSSHTAQSGSSLTSSQDP* 1902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3464256 3493620 + Vvi10g275 Vvi10g275 770874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g275 1901 SUPERFAMILY L domain-like 978 1251 - -
Vvi10g275 1901 Gene3D Ribonuclease Inhibitor 1174 1295 IPR032675 -
Vvi10g275 1901 ProSiteProfiles Leucine-rich repeat profile. 1211 1233 IPR001611 GO:0005515
Vvi10g275 1901 SUPERFAMILY Protein kinase-like (PK-like) 1552 1858 IPR011009 -
Vvi10g275 1901 Gene3D Transferase(Phosphotransferase) domain 1 1644 1850 - -
Vvi10g275 1901 Gene3D Ribonuclease Inhibitor 870 942 IPR032675 -
Vvi10g275 1901 Coils Coil 1 1 - -
Vvi10g275 1901 ProSitePatterns Protein kinases ATP-binding region signature. 1574 1596 IPR017441 GO:0005524
Vvi10g275 1901 Gene3D Ribonuclease Inhibitor 1107 1173 IPR032675 -
Vvi10g275 1901 SUPERFAMILY L domain-like 876 927 - -
Vvi10g275 1901 MobiDBLite consensus disorder prediction 1874 1901 - -
Vvi10g275 1901 Pfam Protein kinase domain 1571 1836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g275 1901 Gene3D - 1305 1499 - -
Vvi10g275 1901 SMART serkin_6 1568 1839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g275 1901 Gene3D Ribonuclease Inhibitor 943 1106 IPR032675 -
Vvi10g275 1901 ProSiteProfiles Protein kinase domain profile. 1568 1845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g275 1901 PANTHER REPEAT TRANSMEMBRANE PROTEIN KINASE, PUTATIVE-RELATED 752 919 - -
Vvi10g275 1901 PANTHER REPEAT TRANSMEMBRANE PROTEIN KINASE, PUTATIVE-RELATED 974 1876 - -
Vvi10g275 1901 CDD STKc_IRAK 1574 1841 - -
Vvi10g275 1901 Pfam Malectin domain 1311 1494 IPR021720 -
Vvi10g275 1901 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 974 1876 - -
Vvi10g275 1901 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 752 919 - -
Vvi10g275 1901 Gene3D Phosphorylase Kinase; domain 1 1539 1643 - -
Vvi10g275 1901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1690 1702 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g275 Vvi12g107 ECH
Vvi10g275 Vvi19g44 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75980 PF00069 Pkinase 2.10E-47 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g275 - - vvi:104880494 1911.35