Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g279 ATGCTGCAGTGGCGTCTTCTTCGTCTCTCTTTGATTACCATGTGTTTCTTGTGCCCACTGACATCTGCTCATCTGGATCGCCAAGAATTGGTTGCTCTGGCTAAAATCGTAAGAACAATGGGCGCCACCTTAAACTCAAGCGTTGATCCTTGCGAATCCAAAACCCTCGTCATCTCTGATTCCAAACCAGGCCTGGACCAGAACAAAGTTGTGTGCAATTGCCACCCCAATCCCTCAACTTGTCACATCACAATCCTAGTCCTCAGAATGTACAGTCTTCCTGGAACGCTTCCACCGCAATTGGTTGATCTTCCTTATCTCGAGGAACTTGACCTTACTCGAAACTACCTTGAAGGTACGCTTCCAAAAGAATGGGCTACAATGAAGTTTCTGCGTTCTATTTCACTTGCAGCGAATCGCATAACAGGGGAAATCCCTAGGGAATGGGGGAGTTTTACAAATCTCACTAGCTTGAGCCTTGAAGCTAACCGGTTGTCTGGAAATATTCCTGCGGAGCTTGGGAATTTGGTCAACTTAACAGTGCTAATACTTTCATCCAATAAGTTTGTTGGAAACTTGCCAGAAAAACTTGCTGCGATGAAAAACTTGACTGATTTTAGGATAAGTGGTAACAACTTTAGTGGAAGCATACCTCAATTCATTGGCAACTGGACTCGACTCAAAAGGCTAGAACTATATGCGACTGGACTGGAAGGACCCATCCCCAATGGCATTTTTCATTTGGAAGCTTTGAATGACCTGAGGATCACTGATATGAATGGGGCAAACTTTTTTCCTGAATATCTGCCTCACAAGGACTACATGAAAAACTTGTATGTTAAATACTCCCCTTATGATGTCAGCTTGAACAGATTGAAAGGGAATTTCCCAAGCATTCCACATGTACCAGAATTCACCTTTTTGGGTGGCAACATGCTATCTGGAACTGTACCGGACTCAATCTTAGATGAAGATAAATATATGTACGTTCTCAAACTTAGATGCTAG 1008 43.25 MLQWRLLRLSLITMCFLCPLTSAHLDRQELVALAKIVRTMGATLNSSVDPCESKTLVISDSKPGLDQNKVVCNCHPNPSTCHITILVLRMYSLPGTLPPQLVDLPYLEELDLTRNYLEGTLPKEWATMKFLRSISLAANRITGEIPREWGSFTNLTSLSLEANRLSGNIPAELGNLVNLTVLILSSNKFVGNLPEKLAAMKNLTDFRISGNNFSGSIPQFIGNWTRLKRLELYATGLEGPIPNGIFHLEALNDLRITDMNGANFFPEYLPHKDYMKNLYVKYSPYDVSLNRLKGNFPSIPHVPEFTFLGGNMLSGTVPDSILDEDKYMYVLKLRC* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3581849 3586042 + Vvi10g279 Vvi10g279 770878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g279 335 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 82 257 - -
Vvi10g279 335 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 131 321 - -
Vvi10g279 335 Gene3D Ribonuclease Inhibitor 39 195 IPR032675 -
Vvi10g279 335 Gene3D Ribonuclease Inhibitor 196 327 IPR032675 -
Vvi10g279 335 SUPERFAMILY L domain-like 74 300 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g279 Vvi19g48 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g279 - - vvi:100256593 640.958