Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g300 ATGAGGTTTTGTGTTTTCTTTTTGCTTTTCCTGCTTCCTCTCCTGGCCTCATGTGCAGAAAGAAAGGTCTATATAGTATATTTTGGAGGACACAGTGGACAGAAAGCACTTCATGAGATAGAGGATTATCACCACTCGTATCTTCTCTCTGTGAAAGCATCCGAGGAAGAAGCTAGAGATTCTCTCCTCTACAGTTACAAGCACAGCATCAATGGCTTTGCAGCAGTTCTCAGCCCCCAAGAAGCCACAAAGCTTTCGGAGATGGATGAAGTGGTATCAGTATTCCCCAGCCAGCGGAAAAAGCACACCCTCCACACTACAAGGTCATGGGAATTTGTAGGCTTGGAGAAGGGACTGGGAAGAGAACAGTTGAAGAAGCAAAAGAAGACGAGAAATTTATTGGAAAAAGCCAGATATGGTGATCAAATCATAGTTGGGATGGTGGATAATGGTGTATGGCCGGAGTCGAAGAGCTTTAGTGATGAAGGAATGGGACCTATCCCAAAATCATGGAAGGGAATCTGCCAAACTGGAGTTGCTTTCAACTCCTCCGATTGTAACAGGAAGCTGATTGGAGCTCGATACTATCTGAAGGGTTATGAGTCGGACAATGGCCCTCTTAACACCACAACAGATTATAGATCACCACGTGACAAGGATGGCCACGGAACCCACACGGCATCTACGGTTGCAGGGCGAAGGGTTCACAATGTTTCAGCACTTGGGTATGCCCCCGGCACAGCCTCAGGAGGAGCCCCGCTGGCTCTTCATGTACTCAGCATCTCTATCGGGACTTCTACACCTTTCACTTATGCCAAAGATGGTATAGCAATTGGAGCACTTCATGCCACCAAGAACAACATTGTAGTGGCATGTAGCGCTGGGAATTCAGGCCCTGGCCCCTCAACTTTGTCCAACCCTGCACCATGGATCATCACAGTTGGCGCTAGTAGCGTAGACCGAGCATTTGTCACTCCTCTGGTTCTTGGAAATGGCATGAAACTCATGGGAGAATCCGTAACCCCATACAAGCTGAAGAAAAAGATGTACCCCCTGGTATTCGCAGCAGATGTCGTCGTCCCTGGAGTGCCCAAGAACAATACTGCAGCAAATTGCAACTTTGGTTCCCTTGATCCAAAGAAGGTGAAAGGAAAGCTAGTTTTGTGCTTGAGGGGCGGTATTGCATTGAGAATTGAAAAGGGCATTGAAGTGAAAAGAGCCGGGGGTGTTGGTTTTATTCTAGGAAACACGCCGGAAAATGGATTTGATCTCCCAGCAGACCCTCACCTTCTTCCTGCAACTGCAGTGAGTTCCGAGGATGTGACTAAAATTCGTAACTATATTAAATCAACAAAGAAACCAATGGCAACCATCATTCCAGGACGGACGGTGTTACATGCTAAACCAGCACCATTCATGGCTTCTTTCACCAGTAGAGGTCCGAATACAATCGATCCTAATATTCTCAAGCCCGACATCACAGGTCCAGGACTAAATATATTGGCAGCATGGAGCGAAGGATCATCCCCTACAAGGTCAGAATTGGATCCCCGAGTGGTGAAGTATAATATTTTCTCTGGAACATCTATGTCTTGCCCTCATGTGGCTGCTGCAGTTGCTCTTCTCAAAGCCATTCACCCTAATTGGAGCAGTGCTGCTATAAGATCTGCTCTCATGACCACAGCCGGACTTGTAAACAACATTGGCAAGCCAATAACTGATTCATCTGGCAATCCAGCAAACCCTTTCCAATACGGTTCAGGCCACTTCCGACCAACAAAGGCTGCAGATCCCGGTCTAGTATACGACACTACATACACTGACTATCTTCTCTACCTCTGCAATATTGGAGTTAAAAGTCTTGACTCCTCATTCAATTGTCCAAAAGTGTCACCCTCATCCAACAATCTCAACTATCCATCCCTCCAGATCTCCAAACTCAAACGCAAAGTGACCATCACAAGGACCGTCACTAATGTTGGCAGCGCTAGAAGTATATACTTCTCTAGCGTTAAGTCACCAGTGGGATTTTCAGTTAGGGTTGAGCCAAGTATCCTGTACTTTAATCATGTTGGGCAGAAGAAAAGCTTCTGCATAACAGTAGAAGCTAGAAACCCAAAGGCAAGCAAAAAGAATGATGCAGAGGAGTATGCTTTTGGTTGGTATACATGGAATGATGGAATCCATAATGTAAGAAGCCCTATGGCAGTGTCTTTAGCTTAG 2223 46.11 MRFCVFFLLFLLPLLASCAERKVYIVYFGGHSGQKALHEIEDYHHSYLLSVKASEEEARDSLLYSYKHSINGFAAVLSPQEATKLSEMDEVVSVFPSQRKKHTLHTTRSWEFVGLEKGLGREQLKKQKKTRNLLEKARYGDQIIVGMVDNGVWPESKSFSDEGMGPIPKSWKGICQTGVAFNSSDCNRKLIGARYYLKGYESDNGPLNTTTDYRSPRDKDGHGTHTASTVAGRRVHNVSALGYAPGTASGGAPLALHVLSISIGTSTPFTYAKDGIAIGALHATKNNIVVACSAGNSGPGPSTLSNPAPWIITVGASSVDRAFVTPLVLGNGMKLMGESVTPYKLKKKMYPLVFAADVVVPGVPKNNTAANCNFGSLDPKKVKGKLVLCLRGGIALRIEKGIEVKRAGGVGFILGNTPENGFDLPADPHLLPATAVSSEDVTKIRNYIKSTKKPMATIIPGRTVLHAKPAPFMASFTSRGPNTIDPNILKPDITGPGLNILAAWSEGSSPTRSELDPRVVKYNIFSGTSMSCPHVAAAVALLKAIHPNWSSAAIRSALMTTAGLVNNIGKPITDSSGNPANPFQYGSGHFRPTKAADPGLVYDTTYTDYLLYLCNIGVKSLDSSFNCPKVSPSSNNLNYPSLQISKLKRKVTITRTVTNVGSARSIYFSSVKSPVGFSVRVEPSILYFNHVGQKKSFCITVEARNPKASKKNDAEEYAFGWYTWNDGIHNVRSPMAVSLA* 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3915069 3919935 + Vvi10g300 Vvi10g300 770899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g300 740 CDD Peptidases_S8_3 102 562 IPR034197 -
Vvi10g300 740 Gene3D Peptidase S8/S53 domain 473 562 IPR036852 GO:0004252|GO:0006508
Vvi10g300 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 105 IPR037045 -
Vvi10g300 740 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 256 737 - -
Vvi10g300 740 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 17 254 - -
Vvi10g300 740 Gene3D Peptidase S8/S53 domain 253 324 IPR036852 GO:0004252|GO:0006508
Vvi10g300 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 254 IPR045051 -
Vvi10g300 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 256 737 IPR045051 -
Vvi10g300 740 MobiDBLite consensus disorder prediction 206 227 - -
Vvi10g300 740 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vvi10g300 740 Pfam Fibronectin type-III domain 636 737 IPR041469 -
Vvi10g300 740 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Vvi10g300 740 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Vvi10g300 740 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Vvi10g300 740 Pfam Peptidase inhibitor I9 23 98 IPR010259 -
Vvi10g300 740 ProSiteProfiles Serine proteases, subtilase domain profile. 116 596 - -
Vvi10g300 740 Gene3D - 613 739 - -
Vvi10g300 740 SUPERFAMILY Subtilisin-like 106 600 IPR036852 GO:0004252|GO:0006508
Vvi10g300 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Vvi10g300 740 Pfam PA domain 357 443 IPR003137 -
Vvi10g300 740 Gene3D Peptidase S8/S53 domain 106 252 IPR036852 GO:0004252|GO:0006508
Vvi10g300 740 Pfam Subtilase family 140 246 IPR000209 GO:0006508|GO:0008236
Vvi10g300 740 Pfam Subtilase family 256 588 IPR000209 GO:0006508|GO:0008236
Vvi10g300 740 CDD PA_subtilisin_like 327 458 - -
Vvi10g300 740 Gene3D - 325 465 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g300 - - vvi:100250276 1445.25