Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g305 ATGATATATAAAAAAAAACTGTTTCCAAGAAAAGAACCTGCTGTGACAACACAGGTCTATATAGTATATTTTGGAGAACACAGTGGACAGAAAGCACTTCATGAGATAGAGGATTATCACCACTCGTATCTTCTCTCTGTGAAAGCATCCGAGGAAGAAGCTAGAGATTCTCTCCTCTACAGTTACAAGCACAGCATCAATGGCTTTGCAGCAGTTCTCAGCCCCCATGAAGTCACAAAGCTTTCGGAGATGGATGAAGTGGTATCAGTATTCCCCAGCCAGCGGAAAAAGCACACCCTCCACACTACAAGGTCATGGGAATTTGTAGGCTTGGAGAAGGAACTGGGAAGAGAACAGTTGAAGAAGCAAAAGAAGACGAGAAATTTATTGGAAAAAGCCAGATATGGTGATCAAATCATAGTTGGGATGGTGGATAATGGTGTATGGCCGGAGTCGAAGAGCTTTAGTGATGAAGGAATGGGACCTATCCCAAAATCATGGAAGGGAATCTGCCAAACTGGAGTTGCTTTCAACTCCTCCCATTGTAACAGGAAGCTGATTGGAGCTCGATACTATCTGAAGGGTTATGAGTCGGACAATGGCCCCCTTAACACCACAACAGATTATAGATCACCACGTGACAAGGATGGCCATGGAACCCACACAGCATCAACAGTTGCAGGGCGAAGGGTTCACAATGTTTCAGCACTTGGGTATGCCCCCGGCACTGCCTCAGGAGGAGCCCCACTGGCTCGTCTCGCCATTTACAAAGTCTGCTGGCCGATCCCAGGCCAAACAAAGGTGAAAGGGAACACATGCTATGAAGAAGACATCGCTGGGAATTCAGGCCCTGCCCCCTCAACTTTGTCCAACCCTGCACCATGGATCATCACAGTTGGTGCTAGTAGCATAGACCGAGCATTTGTCACTCCTCTTGTTCTTGGAAATGGCATGAAACTCATGGGACAATCCGTAACCCCATACAAGCTGAAGAAAAAGATGTACCCCCTGGTATTCGCAGCAGATGCCGTCGTCCCTGGAGTGCCCAAGAACAATACTGCAGCAAATTGCAACTTTGGTTCCCTTGATCCAAAGAAGGTGAAAGGAAAGATAGTTTTGTGCTTGAGGGGTGGTATGACATTGAGAATTGAAAAGGGCATTGAAGTGAAAAGAGCCGGGGGTGTTGGTTTTATTCTAGGAAACACGCCGGAAAATGGATTTGATCTCCCAGCAGACCCTCACCTTCTTCCTGCAACTGCAGTGAGTTCCGAGGATGTGACTAAAATTCGTAACTACATTAAATCAACAAAGAAACCAATGGCAACCATCATTCCAGGACGGACGGTGTTACATGCTAAACCAGCACCATTCATGGCTTCTTTCATCAGTAGGGGTCCAAATACTATCGATCCTAATATTCTCAAGCCTGACATCACAGGTCCAGGACTCAATATATTAGCAGCATGGAGCGAAGGATCATCCCCTACAAGGTCAGAATTGGATCCCCGAGTGGTGAAGTATAATATTTTCTCTGGAACATCTATGTCTTGCCCTCATGTGGCTGCTGCAGTTGCTCTTCTCAAAGCCATTCACCCTAATTGGAGCAGTGCTGCTATAAGATCTGCTCTCATGACCACGGCCGGACTTGTAAACAACATTGGCAAGCCAATAACTGATTCATCTGGCAATCCAACAAACCCTTTCCAATACGGTTCAGGCCACTTCCGACCAACAAAGGCTGCAGATCCCGGTCTAGTATACGACACTACATACACTGACTATCTTCTCTACCTCTGCAATATTGGAGTTAAAAGTCTGGACTCCTCATTCAAGTGTCCAAAAGTGTCACCCTCATCCAACAATCTCAACTATCCATCCCTCCAGATCTCCAAACTCAAACGCAAAGTGACCGTCACAAGGACTGCCACTAATGTTGGCAGCGCTAGAAGTATATACTTCTCTAGCGTTAAGTCACCAGTGGGATTTTCAGTTAGGGTTGAGCCAAGTATCCTGTACTTCAATCATGTTGGGCAGAAGAAAAGCTTCGACATAACAGTAGAAGCAAGAAACCCTAAGGCAAGCAAAAAGAATGACACAGAGTATGCTTTTGGTTGGTATACATGGAATGATGGAATCCACAATGTAAGAAGCCCTATGGCAGTGTCTTTAGCTTAG 2175 45.79 MIYKKKLFPRKEPAVTTQVYIVYFGEHSGQKALHEIEDYHHSYLLSVKASEEEARDSLLYSYKHSINGFAAVLSPHEVTKLSEMDEVVSVFPSQRKKHTLHTTRSWEFVGLEKELGREQLKKQKKTRNLLEKARYGDQIIVGMVDNGVWPESKSFSDEGMGPIPKSWKGICQTGVAFNSSHCNRKLIGARYYLKGYESDNGPLNTTTDYRSPRDKDGHGTHTASTVAGRRVHNVSALGYAPGTASGGAPLARLAIYKVCWPIPGQTKVKGNTCYEEDIAGNSGPAPSTLSNPAPWIITVGASSIDRAFVTPLVLGNGMKLMGQSVTPYKLKKKMYPLVFAADAVVPGVPKNNTAANCNFGSLDPKKVKGKIVLCLRGGMTLRIEKGIEVKRAGGVGFILGNTPENGFDLPADPHLLPATAVSSEDVTKIRNYIKSTKKPMATIIPGRTVLHAKPAPFMASFISRGPNTIDPNILKPDITGPGLNILAAWSEGSSPTRSELDPRVVKYNIFSGTSMSCPHVAAAVALLKAIHPNWSSAAIRSALMTTAGLVNNIGKPITDSSGNPTNPFQYGSGHFRPTKAADPGLVYDTTYTDYLLYLCNIGVKSLDSSFKCPKVSPSSNNLNYPSLQISKLKRKVTVTRTATNVGSARSIYFSSVKSPVGFSVRVEPSILYFNHVGQKKSFDITVEARNPKASKKNDTEYAFGWYTWNDGIHNVRSPMAVSLA* 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3990587 3995796 - Vvi10g305 Vvi10g305 770904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g305 724 Pfam Subtilase family 279 573 IPR000209 GO:0006508|GO:0008236
Vvi10g305 724 Pfam Subtilase family 136 269 IPR000209 GO:0006508|GO:0008236
Vvi10g305 724 SUPERFAMILY PA domain 357 417 IPR046450 -
Vvi10g305 724 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 8 101 IPR037045 -
Vvi10g305 724 Gene3D - 305 450 - -
Vvi10g305 724 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vvi10g305 724 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vvi10g305 724 PRINTS Subtilisin serine protease family (S8) signature 511 527 IPR015500 -
Vvi10g305 724 Gene3D Peptidase S8/S53 domain 279 594 IPR036852 GO:0004252|GO:0006508
Vvi10g305 724 Gene3D Peptidase S8/S53 domain 139 278 IPR036852 GO:0004252|GO:0006508
Vvi10g305 724 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 14 278 - -
Vvi10g305 724 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 279 721 - -
Vvi10g305 724 SUPERFAMILY Subtilisin-like 102 585 IPR036852 GO:0004252|GO:0006508
Vvi10g305 724 Pfam Peptidase inhibitor I9 19 94 IPR010259 -
Vvi10g305 724 CDD Peptidases_S8_3 98 547 IPR034197 -
Vvi10g305 724 ProSitePatterns Serine proteases, subtilase family, serine active site. 512 522 IPR023828 -
Vvi10g305 724 Pfam Fibronectin type-III domain 621 721 IPR041469 -
Vvi10g305 724 Pfam PA domain 345 428 IPR003137 -
Vvi10g305 724 CDD PA_subtilisin_like 312 443 - -
Vvi10g305 724 ProSiteProfiles Serine proteases, subtilase domain profile. 114 581 - -
Vvi10g305 724 Gene3D - 598 723 - -
Vvi10g305 724 MobiDBLite consensus disorder prediction 202 224 - -
Vvi10g305 724 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 279 721 IPR045051 -
Vvi10g305 724 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 278 IPR045051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g305 Vvi19g8 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g305 - - vvi:100252070 1391.71