Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g307 ATGCGCCCGATCTACACTTTCTCTAACGTTGAAGAGTTCTGGAGCATTTACAACAATATACATCATCCGAGCAAGTTAGCTGTCGGAGCAGACTTCCATTGTTTCAAACACAAAATTGAGCCAAAATGGGAGGACCCTGTTTGTGCTAATGGGGGGAAGTGGACTGTAACCTTTGCTAAAGGGAAATCTGATACCTGTTGGCTTTATACGTTGCTAGCCATGATCGGAGAACAGTTTGATCATGGAGATGAAATCTGTGGAGCAGTGATCAATGTCAGAGCTAGACAGGAGAAAATAGCTCTATGGACCAAGAATGCTTCAAATGAAGCTGCTCAGCTGAGCATTGGAAAACAATGGAAGGAATTTCTGGATTACAGCGAAAGCATAGGCTTCATATTTCATGAGGATGCAAAGAAGCTTGACAGAGCTGCCAAGAATCGATACACGATATGA 453 43.05 MRPIYTFSNVEEFWSIYNNIHHPSKLAVGADFHCFKHKIEPKWEDPVCANGGKWTVTFAKGKSDTCWLYTLLAMIGEQFDHGDEICGAVINVRARQEKIALWTKNASNEAAQLSIGKQWKEFLDYSESIGFIFHEDAKKLDRAAKNRYTI* 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4024026 4029294 - Vvi10g307 Vvi10g307 770906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g307 150 Pfam Eukaryotic initiation factor 4E 2 128 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi10g307 150 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 150 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi10g307 150 SUPERFAMILY eIF4e-like 2 146 IPR023398 -
Vvi10g307 150 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 150 - -
Vvi10g307 150 ProSitePatterns Eukaryotic initiation factor 4E signature. 31 54 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vvi10g307 150 Gene3D RNA Cap, Translation Initiation Factor Eif4e 1 150 IPR023398 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g307 K03259 - vvi:100262414 322.013