Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g33 ATGGAGTTGACTGACCTCCTTCTCCTCTCTTTGGCTCTCATCTTCCTCCGTTTCTGGTGGCGGTACTGGTCAGTCACCGGCGGTGGTCCCAAGAACCTCCCGCCAGGCCCACCCGGGTGGCCGCTGGTTGGGAACCTGGTGCAGGTGATCCTCCAGCGCCGTCCCTTCATCTACGTGGTACGTGATTTACGTGCCAAGTATGGACCTATCTTCACGCTACAGATGGGTCAGCGGACTCTGGTTATTGTGACGAGCTCTGAGCTGATTCATGAAGCTTTGGTGCAGAGGGGGCCGATATTCGCTAGCAGACCAGAGGATTCGCCAACACGGCTTGTGTTCAGTGTGGGGAAATGCGCCATTAACTCGGCTCAGTATGGGCCGCTTTGGAGGACTTTGCGGCGGAACTTTGTGGCGGAGCTGATAACTCCCACGAGGATCAGGCAGTGCAGTTGGATACGGAAGTGGGCGCTGGAGAACCACATGAGGAGGCTGCAAATGGAGGTTTCGGAGAAGGGTTTTGTGGAGGTGATGAGCAACTGTAGGCTCACTATCTGTAGCATTCTTATATGTATATGTTTTGGTGCAAAGATCTCCGAGCGGCGGATTAAGGAGATCGAGAGCGTACTGAAGGACGTCATGTTGATGACTACGCCGAAGCTCCCGGACTTCCTGCCTGTTCTGACGCCTCTGCTGCGCCGGCAACTGAGAGAAGCGAAGGAGCTGAGGAAGAAACAAATGGAGTGCATGGTTCCACTCGTGAGAAGCAGAAGAGCATTCGTGGAGAGTAAGGGAGCCCCCGGCCGCAGCAGCTCAGAAATGGTGAGTCCGATCGGTGCAGCCTATATCGACTCGCTTTTTGGGCTGGAGCCCGCCGAGCGAGGTCGGTTGGGAGAGGAAGAGCTCGTTACACTGTGCTCGGAAATCATCAACGCCGGAACCGATACCAGTGCAACCACGGTTGAGTGGGCTCTGCTTCACTTGGTGATGAACCAGGACATTCAGCAAAAGCTTTACAAAGAGATAATCGACTGTGTAGGAAAAAATGGAGTTGTCACGGAAGGAGACGTAGAGAAAATGCCCTACCTCGGTGCAATCGTGAAGGAAACTTTCCGGCGCCACCCGCCCAGTCATTTCGTTCTATCCCATGCAGCCACCAAGGACACAGAGCTCGGCGGCTACACAATTCCAGCTGACGTGAACGTGGAGTTCTACACCGCCTGGGTGACAGAGGACCCGGACCTGTGGCAGGACCCGGCAGAGTTCCGGCCTGAGAGGTTCCTCCAAGGAGACGGAGTCAACGTGGACGTGACCGGAACCCGGGGAGTGAAAATGGTCCCATTTGGCGCGGGCAGGAGAATCTGTCCAGCCATGAATTTGGGCACGTTGCATGTGAATTTGTTGATTGCAAGGATGATCCATGCATTCAAATGGATCCCGGCCCCGGGTTCCCCACCTGACCCGACTGAAACCTTTGCCTTCACAGTTGTCATGAAAAACCCCCTTAAAGCTATCATCTTACCTAGATGA 1527 54.81 MELTDLLLLSLALIFLRFWWRYWSVTGGGPKNLPPGPPGWPLVGNLVQVILQRRPFIYVVRDLRAKYGPIFTLQMGQRTLVIVTSSELIHEALVQRGPIFASRPEDSPTRLVFSVGKCAINSAQYGPLWRTLRRNFVAELITPTRIRQCSWIRKWALENHMRRLQMEVSEKGFVEVMSNCRLTICSILICICFGAKISERRIKEIESVLKDVMLMTTPKLPDFLPVLTPLLRRQLREAKELRKKQMECMVPLVRSRRAFVESKGAPGRSSSEMVSPIGAAYIDSLFGLEPAERGRLGEEELVTLCSEIINAGTDTSATTVEWALLHLVMNQDIQQKLYKEIIDCVGKNGVVTEGDVEKMPYLGAIVKETFRRHPPSHFVLSHAATKDTELGGYTIPADVNVEFYTAWVTEDPDLWQDPAEFRPERFLQGDGVNVDVTGTRGVKMVPFGAGRRICPAMNLGTLHVNLLIARMIHAFKWIPAPGSPPDPTETFAFTVVMKNPLKAIILPR* 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 364437 365964 + Vvi10g33 Vvi10g33 770632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g33 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 Pfam Cytochrome P450 34 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vvi10g33 508 PANTHER CYTOCHROME P450 LIKE PROTEIN 3 507 - -
Vvi10g33 508 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 507 - -
Vvi10g33 508 SUPERFAMILY Cytochrome P450 34 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g33 508 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g33 K21995 - vvi:100246851 989.564