Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g356 | ATGGACGAGCCCCTACTCCCTTACTTGAGTCCAAGGAAAAGCCGCCCATCTCCCCTCTTTCCTCTCCCTGAAGAGGACGAAGTGGCTCTCCCTCTCACCCCTTCTGAGTTCAAAGACCGTCTCATCTTCGGCCCTTCTTCTTCATCCCCCAGCGACTCTTCTCCTCTTCTCATCGACGCCCTAACCCTAACCATAAACTCCCCCAAGACCTCCTCTTCCATTGACCAAGACCCACTCTTACAGCCCCAACTACAACCATGGTTGGTCGACCCCCAATCCAATTGGCCCAAAACCAATCTCCATCGCTCCAAAACCAATCTCCATCGCTCCAAAACCGCCCCCGCCATGGCTGTCATCAACGATTTCCAACACCCTTCTGGGCCCAGACCCCAATTCAGGTCGCCCTCCATTAGAATTATCTTCTTAGGAGGGAGAATGAGGATTCGGATGAAAGTGGCTTTAGCATTGGGGGTTGTGGTTCTTTGTATTGGAATTGGTGTGGGTGTTATGCATTTTGTGGAGGAGCTTGACTGGTTGGATTCATTTTATCTCTCTGTCATGTCAGTTACCACAGTTGGATATGGGGATCGGGCATTTAAGTCTATGCCCGGCCGCATTTTTGCATCAATTTGGTTGCTTGTGTCAACACTTGCTGTTGCTAGAGCATTTCTTTACTTGGCAGAGGCAAGAGTTGATAAGCGGCATAGGAAGATGGCAAAATGGGTGCTTGGTCAGGACATGACTGTTGCTGAGTTTCTTGCTGCTGACATTGACAACAATGGTTTTGTGAGTAAATCAGAATATGTCATATACAAGCTCAAGGAGCTGGGAAAGGTATCTGAGAAAGACATTTCGCAGATCTGTAACAAGTTTGACAGGCTAGACAGTGGCAACTGTGGAAAGATAACTCTTGCTGATCTCATGGAGAACCATCACTGA | 939 | 48.35 | MDEPLLPYLSPRKSRPSPLFPLPEEDEVALPLTPSEFKDRLIFGPSSSSPSDSSPLLIDALTLTINSPKTSSSIDQDPLLQPQLQPWLVDPQSNWPKTNLHRSKTNLHRSKTAPAMAVINDFQHPSGPRPQFRSPSIRIIFLGGRMRIRMKVALALGVVVLCIGIGVGVMHFVEELDWLDSFYLSVMSVTTVGYGDRAFKSMPGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWVLGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKELGKVSEKDISQICNKFDRLDSGNCGKITLADLMENHH* | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4878472 | 4890234 | + | Vvi10g356 | Vvi10g356 | 770955 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g356 | 312 | Gene3D | - | 220 | 312 | - | - | |
Vvi10g356 | 312 | SUPERFAMILY | EF-hand | 251 | 308 | IPR011992 | - | |
Vvi10g356 | 312 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Vvi10g356 | 312 | SUPERFAMILY | Voltage-gated potassium channels | 142 | 249 | - | - | |
Vvi10g356 | 312 | Pfam | Ion channel | 158 | 227 | IPR013099 | - | |
Vvi10g356 | 312 | ProSitePatterns | EF-hand calcium-binding domain. | 256 | 268 | IPR018247 | - | |
Vvi10g356 | 312 | Gene3D | - | 157 | 219 | - | - | |
Vvi10g356 | 312 | PANTHER | TWO-PORE POTASSIUM CHANNEL 3 | 86 | 137 | - | - | |
Vvi10g356 | 312 | PANTHER | TWO-PORE POTASSIUM CHANNEL 3 | 144 | 307 | - | - | |
Vvi10g356 | 312 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 144 | 307 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Vvi10g356 | 312 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 86 | 137 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g356 | K05389 | - | vvi:100262340 | 322.398 |