Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g357 | ATGTCTGATGAGCCAAGAGATCTCTACTACCATGACCCATTCCATGATGATCGACATGGAATCATAGGGAACACTGGTTTTTCCTTCTCTGCCATTAATGATTCCAAAGCTGATTCTTCCATGAGAGCTGCTCCTTCCCCTCCCAATCTACAAGGCTTTGATCCTCCATACATGAGCTTCACCGACTGTCTTAATGGATCTCTGGACTATAATTCACTCACAACAGCCTTTGGCTTGTCACCTTCATCCTCAGAAGCATTTTCTCCCGTTGAAGGCAATCATAAGCCAGTCGCAAACCTCGGAGATTTAGGTGCCAGTGGTGAAATTGCGGGCACTCCTAACTCCTCCATCTCTTCCTCTTCTACTGAGGCCGGCGCTGAAGAGGATTCAAGCAAGAGTAAGAAGGACCGGCAGGCCAAAGTGTCTGAATTAGACGGAGGGGATGGCTCAAAGAAAGTGAACAAGCCCAAGAAGAAGGCAGAGAAAAGGCAAAGAGAGCCACGGTTCGCCTTCATGACTAAGAGTGAGGTCGATCATCTAGAGGATGGATATAGATGGAGAAAGTATGGACAGAAAGCTGTCAAGAATAGCCCTTTTCCAAGAAGCTACTATCGGTGCACTACTCAGAAGTGCACGGTGAAGAAACGAGTGGAGAGATCCTTCCAGGATCCATCGACAGTGATTACAACATATGAAGGCCAGCACAACCATCAGATACCGGTAACGCTGCGAGGGAATGCTGGCGGAATGCTACCACCTTCTGTGTTAACACCAGGACAGATGGGAGGGCCAGGGTTTCCTCAAGAGCTGTTTTTTCAGATGGCTTCTCCCATGAACAATCTCAGTGCTGCAGGCTCTTTCTACCCACAGGGGCTAACCCCTTTTCAGCAGCTGCAGTTTCATGACTATGGGCTCTTGCAAGATGTGGTTCCCTCCATGATTCACAAACAGGAGCCATGA | 960 | 48.44 | MSDEPRDLYYHDPFHDDRHGIIGNTGFSFSAINDSKADSSMRAAPSPPNLQGFDPPYMSFTDCLNGSLDYNSLTTAFGLSPSSSEAFSPVEGNHKPVANLGDLGASGEIAGTPNSSISSSSTEAGAEEDSSKSKKDRQAKVSELDGGDGSKKVNKPKKKAEKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCTVKKRVERSFQDPSTVITTYEGQHNHQIPVTLRGNAGGMLPPSVLTPGQMGGPGFPQELFFQMASPMNNLSAAGSFYPQGLTPFQQLQFHDYGLLQDVVPSMIHKQEP* | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4894475 | 4896340 | + | Vvi10g357 | Vvi10g357 | 770956 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g357 | 319 | SMART | WRKY_cls | 180 | 239 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi10g357 | 319 | MobiDBLite | consensus disorder prediction | 81 | 174 | - | - | |
Vvi10g357 | 319 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 310 | IPR044810 | GO:0003700 | |
Vvi10g357 | 319 | PANTHER | WRKY TRANSCRIPTION FACTOR 81 | 1 | 310 | - | - | |
Vvi10g357 | 319 | Pfam | WRKY DNA -binding domain | 181 | 238 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi10g357 | 319 | ProSiteProfiles | WRKY domain profile. | 175 | 240 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi10g357 | 319 | MobiDBLite | consensus disorder prediction | 109 | 126 | - | - | |
Vvi10g357 | 319 | MobiDBLite | consensus disorder prediction | 127 | 155 | - | - | |
Vvi10g357 | 319 | SUPERFAMILY | WRKY DNA-binding domain | 172 | 240 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi10g357 | 319 | Gene3D | WRKY domain | 165 | 241 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13663 | PF03106 | WRKY | 7.10E-26 | CL0274 | Vvi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g357 | - | - | vvi:100257231 | 644.81 |