Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g365 ATGGCTGCCTCCACCATGGCTCTCTCCTCCCCATCATTGGCCGGCACCGCCGTGAAGCTTGGCCCCAATACCTTCGCCAAGAACCGTGAGCTTGAGGTGATCCACTGCCGATGGGCCATGCTTGGAGCCCTTGGCTGCGTCTTCCCAGAGCTGCTGTCCAGGAATGGAGTCAAGTTCGGTGAAGCCGTGTGGTTCAAGGCTGGTGCACAGATCTTCAGCGAGGTTATCTTGATGGGAGCCGTTGAGGGCTACCGCATTGCCGGTGGGCCACTTGGTGAGGTGAAGGAGATCAAGAATGGGAGACTGGCCATGTTCTCCATGTTCGGGTTCTTCGTTCAGGCCATCGTGACCGGAAAGGGGCCCTTGGAAAACCTTGCTGACCACCTTGCCGACCCAGTCAACAACAACGCCTGGGCATATGCCACAAACTTTGTTCCCGGAAAGTGA 447 57.49 MAASTMALSSPSLAGTAVKLGPNTFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEVILMGAVEGYRIAGGPLGEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5014531 5015432 - Vvi10g365 Vvi10g365 770964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g365 148 Gene3D Chlorophyll a/b binding protein domain 90 141 - -
Vvi10g365 148 Gene3D Chlorophyll a/b binding protein domain 13 77 - -
Vvi10g365 148 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 74 94 - -
Vvi10g365 148 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 22 74 - -
Vvi10g365 148 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 94 148 - -
Vvi10g365 148 Pfam Chlorophyll A-B binding protein 94 114 IPR022796 -
Vvi10g365 148 Pfam Chlorophyll A-B binding protein 22 89 IPR022796 -
Vvi10g365 148 SUPERFAMILY Chlorophyll a-b binding protein 22 145 - -
Vvi10g365 148 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 94 148 IPR001344 GO:0009765|GO:0016020
Vvi10g365 148 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 74 94 IPR001344 GO:0009765|GO:0016020
Vvi10g365 148 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 74 IPR001344 GO:0009765|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g365 K08912 - aof:109829214 237.269