Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g366 ATGGCTGCCTCCACCATGGCCCTCTCCTCCCCATCATTTGCCGGCACCACTGTGAAGCTTGGCCCCAATACCTTCGCCAAGAACCGTGAGCTTGAGATCTTCAGCGAGGTTATCTTGATGGGAGCCGTTGAGGGCTACCGTATTGCCGGTGGGCCACTTGGTGAGGTGAAGGAGATCAAGAATGGGAGACTGGCCATGTTCTCCATGTTCGGGTTCTTCGTTCAGGCCATTGTGACCGGAAAGGGACCCTTGGAGAACCTTGCTGACCACCTCGCCGATCCAGTCAACAACAACGCTTGGGCTTATGCCACAAACTTTGTTCCCGGAAAGTGA 333 55.26 MAASTMALSSPSFAGTTVKLGPNTFAKNRELEIFSEVILMGAVEGYRIAGGPLGEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5026587 5028897 + Vvi10g366 Vvi10g366 770965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g366 110 Gene3D Chlorophyll a/b binding protein domain 53 103 - -
Vvi10g366 110 Pfam Chlorophyll A-B binding protein 56 76 IPR022796 -
Vvi10g366 110 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 36 56 - -
Vvi10g366 110 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 56 110 - -
Vvi10g366 110 SUPERFAMILY Chlorophyll a-b binding protein 30 107 - -
Vvi10g366 110 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 36 56 IPR001344 GO:0009765|GO:0016020
Vvi10g366 110 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 56 110 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g366 Vvi12g46 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g366 K08912 - aof:109829214 142.124