Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g479 ATGACACCTTCCAGTTGCATTGATGAATCTGGTTTCCTGCAGTCTCCAGAAAATGTGGGCCAAGTAAACCCACCAACCCGAACCTTTGTTAAGGTTTACAAATCAGGGTCCTTCGGAAGATCACTAGATATCACTAAATTCAGCAGCTACCATGAACTGCGTGGTGAGCTTGCTCGCATGTTTGGCCTTGAAGGCCAGTTGGAGGACCCTCGGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGATGACCCCTGGCCGGAGTTTGTAAACAGCGTGTGGTGTATCAAGATACTCTCACTACAGGAAGTGCAGCAGATGGGAAAACGAGGGTTAGAGCTTCTGAACTCGGTCCCCATACAAAGGCTCACTAGTAGCAGCTGTGATGACTATGCAAGCCGGCAGGACTCAAGAAATTTGAGCACTGGGATCACATCTGTGGGGTCTCTTGACTACTGA 483 49.07 MTPSSCIDESGFLQSPENVGQVNPPTRTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSLQEVQQMGKRGLELLNSVPIQRLTSSSCDDYASRQDSRNLSTGITSVGSLDY* 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6956454 6957702 - Vvi10g479 Vvi10g479 771078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g479 160 Gene3D - 24 116 - -
Vvi10g479 160 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 140 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vvi10g479 160 SUPERFAMILY CAD & PB1 domains 19 104 - -
Vvi10g479 160 ProSiteProfiles PB1 domain profile. 27 111 IPR000270 GO:0005515
Vvi10g479 160 MobiDBLite consensus disorder prediction 1 20 - -
Vvi10g479 160 PANTHER AUXIN RESPONSE FACTOR 6 1 140 - -
Vvi10g479 160 Pfam AUX/IAA family 73 116 IPR033389 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g479 - - vvi:100242923 326.25