Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g548 ATGGAAGCATCACAAGAGAAAGTGCAATCTGATCACAAGGCATTTGGATGGGCAGCTACAGACTCCTCTGGCCTCCTTTCTCCTTTTCACTTTGCCAGAAGAAGCAATGGAGATGATGATATCACAATGAGGATTCTTTACTGTGGGATTTGCCACACTGACCTCGGCATGCTTAGGAATCACCATGGAATCTCTCTCTACCCTCTTGTTCCTGGGCATGAAATTGTGGGGGTGGTGACCCAAGTGGGCTCCAAGGTACACAAGTTCAAGGTTGGAGACAAGGCAGGTGTGGGCACCATGATAGGCTCCTGTGGTGCATGCCAAAACTGCCAAGACGACTTGGAGAGCTACTGTCCCTCCATGACCACCACCTACACCATGTTTTCACCCGATGGAAGCATCAACTATGGAGGATTTTCTGATATTCTTGTGGTTAATGAGCACTTCGCCGTGCGTTTTCCGGACAACCTTTCACCAGAAGGTGGTGCACCGTTGCTTTGCGCCGGTATCACGGTCTATAGCCCCATGAAGCATTTTGGGCTGACTCAGCCAGGCATGCATCTGGGTGTGGTTGGGCTGGGTGGACTAGGGCATGTTGCAGTGAAGTTCGCTAAGGCATTTGGTATGAAAGTCACTGTGATTAGCACGTCCCTCGCGAAGAAGAATGCTGCTCTTGCTGAGCTAGGCGCTGATTCATTTTTAGTTAGCCATGATTCGGAGCAAATGCAGGCTGCACTCGGGACAATGGACGGCATCATCGACACTGTGTCTGCGCCCCATGCTTTGAAGCCTTTGATAGAACTATTGAAGCGGGATGGGAAGCTGATAATGTTGGGTGCACCAGACATGGAGAAGCCGACTGATTTGCCTCTCTATTCCTTGTTTGTTGGGAGGAAAGTGATATCAGCGAGCATGACAGGAGGAATGAGAGAAACACAAGAAATGATGGAGTTTGCAGGGAAGCACAACATAAGTGCAGATGTTGAAGTCATTTCAATGGCGGATGTGAACACAGCCATGGAGCGACTGACTAAAGGGGATGTCAAGTACCGTTTTGTCATTGACATTGCCAACTCCTTAGCTACTAATTAG 1092 49.08 MEASQEKVQSDHKAFGWAATDSSGLLSPFHFARRSNGDDDITMRILYCGICHTDLGMLRNHHGISLYPLVPGHEIVGVVTQVGSKVHKFKVGDKAGVGTMIGSCGACQNCQDDLESYCPSMTTTYTMFSPDGSINYGGFSDILVVNEHFAVRFPDNLSPEGGAPLLCAGITVYSPMKHFGLTQPGMHLGVVGLGGLGHVAVKFAKAFGMKVTVISTSLAKKNAALAELGADSFLVSHDSEQMQAALGTMDGIIDTVSAPHALKPLIELLKRDGKLIMLGAPDMEKPTDLPLYSLFVGRKVISASMTGGMRETQEMMEFAGKHNISADVEVISMADVNTAMERLTKGDVKYRFVIDIANSLATN* 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8804663 8806457 + Vvi10g548 Vvi10g548 771147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g548 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 324 IPR036291 -
Vvi10g548 363 PANTHER - 3 361 - -
Vvi10g548 363 Pfam Alcohol dehydrogenase GroES-like domain 39 151 IPR013154 -
Vvi10g548 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Vvi10g548 363 Gene3D - 17 356 - -
Vvi10g548 363 CDD CAD1 15 355 - -
Vvi10g548 363 Gene3D - 168 326 - -
Vvi10g548 363 SUPERFAMILY GroES-like 21 185 IPR011032 -
Vvi10g548 363 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Vvi10g548 363 PANTHER ALDEHYDE REDUCTASE 3 361 - -
Vvi10g548 363 SMART PKS_ER_names_mod 24 354 IPR020843 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g548 - K23232 vvi:100243859 727.628