Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g554 ATGGAGGTTTGGGGCCTAATACTTGTGGTGATGGTCTCTGTGTTTGTTGGGAATGGAGAAGCTCAGGCAAAGTCTTTGTTGATAAACTGTGGCACAAATTCCAGTGTTAATGTGGATGGTAGGAGGTGGGTGGGTGACTTGGCTCCTGACAACAATCTTACCCTAAGTTCTCTGGGTGTTGCTGCCTCCACAGACACATTTAGCGGGGATACAACCTTTGCTCAGCTCTATGAAACTGCCCGGATTTTCCCAGATAGTTTGAATTACACAGCTAGCCTAAACCAGGGAAACTATTCTGTTAGGCTCCATTTCTATCCATTCTCCTTTGAGAAGTACAACACAAACGAATCTTCATTCAGTGTGACGGCAAATGGTCTTAAGTTGGCATCCCAATTGAATGTTCCTGGTGAGATTTCGCACAAGAATTCATATTTGCAGAGTTCAGGAAGTAATTCAAGTTCATTCTCTATGATTAAGGAATATTTCCTGACTGTTGATTCGGGTCTGCTTGTGATTGAGTTTGCCCCAACTAAAGGATCATTTGGGTTTATAAATGCCATAGAAATTGTCCCAGTTGTAGATAATCTCTTCTTCAGCTCTGTCAGTAAAGTGGGTGGAACAAATAGTGTTCTGAATTTGAGCGGTCGGGGTATTGAGGCTATGTATAGATTGAATGTTGGGGGTCCTGAGATTACACCAGATCAGGATTTGGATCTATGGAGGACATGGGATGTGGATTCCAGTTACATGTTCACAGCAAATGCCGGGTCAGAAGTTCATAATAGTTCCAATATTACCTATGCTTCCATGAATGATTCAGTGGTTGCCCCTCTTGCAGTGTATGAAACAGCAAGATCTATGTCTAACACTGAAGTCCTGGAGAAAAGGTTCAACATGTCATGGAAATTTGAAGTGGATCCCGATTTTGAATATTTAATTCGATTACATTTCTGTGAGCTGTTTTATGAAAGGGCAAACCAGAGGAGCTTCAGAATCTACATTAACAACAGGACTGCAGCAGATAATTTTGATGTTTTTTTGCGAGCAGGAGGGATGAACAAGGCATATCATCAGGACTTTTTGGATATGGTGTCCTCAAAAATCAACACCCTTTGGATCCAGCTGGGTCCTGATACAACGGTAGGTGCCTCAGGAACTGATGCTATCTTGAACGGGCTGGAGATTTTCAAGCTTAGCCGTAATGGGAATCTTGCCTATGTAGAGAGGTTTGACTCAACCAAGAGTTCAGCAGGCAGCAAAACTTCAAAAACTCAAACTCTTTGGGTGGGACTTGGAGCCGGTGTGGCTTCCATTGCTATGATGGCTGTCATATTTAGTCTCATCTTCTATTTCTGCAAAAGATGGAGAAAGAAATCAAGTGCCACCAAGAACAAATCCCCAGGTTGGCGGCCACTATTCCTTCATGTAAATAGCACCAATGCCAAGGGAATGAGTCAAAGTCTAAGTGTATCTTTGGCCTCTAATAGAGCTGGCAAGCGCTTTACATTAACAGAGATTCGGGCAGCAACAAATAATTTTGATGAAAGTTTAGTGATTGGAGTAGGAGGCTTCGGTAAAGTCTATAAAGGGGAGATTGATGATGGCACTCCTGCAGCAATTAAGCGAGCCAACCCACAATCTGAGCAAGGACTGGCTGAATTTCAAACTGAGATCGAGATGCTTTCAAAGCTCAGGCACAGGCATTTGGTGTCCATGATTGGATTCTGTGAAGAGCAGAATGAGATGATCTTGGTTTATGAGTATATGGCAAATGGGACCCTTAGAAGCCATCTCTTCGGGAGTGAACTCCCACCTTTAACTTGGAAGCAACGATTAGAAGCATGCATTGGGGCTGCTCGAGGGCTCCATTACCTTCATACAGGAGCAGAAAGGGGAATCATCCACAGGGATGTTAAGACTACCAACATACTGATAGATGAAAACTTTGTTGCCAAAATGGCTGATTTTGGATTGTCCAAAACTGGTCCTGCTTGGGAACATACTCATGTTAGCACTGCAGTTAAAGGAAGCTTTGGGTATCTCGACCCAGAATATTTCCGACGACAGCAGTTAACGGAGAAATCTGATGTTTACTCCTTTGGTGTGGTGTTGTTTGAAGTTGTTTGTGCACGGGCCGTCATAAATCCAAGTTTGCCAAGAGACCAGATCAATCTTGCGGAATGGGCTATGCATTGGCAACATCAGAGGTCACTTGAAACCATCATTGACCCACATCTCAAAGGAAATTATTCTCCAGATTCGTTGAGAAAATTTGGGGAGATAGCAGAAAAATGTCTTGCTGATGAGGGAAAGAACCGGCCCACAATGGGGGAAGTTCTATGGCACTTGGAGTATGTCTTGCAACTTCATGAAGCTTGGCTGCGCACCAATGTTGGAGAAAACTCGTTTTCAAGCAGTCAGGCTTTAGGAAACCTTGAAGAGGGACTGGAATCTGCACATCTAGATGAAGAGAATGAAATAAGCCTGAAAATGAAGCAAAAGAGAGAATCTGCAACAAGGGGAATCAATGCATAG 2535 43.31 MEVWGLILVVMVSVFVGNGEAQAKSLLINCGTNSSVNVDGRRWVGDLAPDNNLTLSSLGVAASTDTFSGDTTFAQLYETARIFPDSLNYTASLNQGNYSVRLHFYPFSFEKYNTNESSFSVTANGLKLASQLNVPGEISHKNSYLQSSGSNSSSFSMIKEYFLTVDSGLLVIEFAPTKGSFGFINAIEIVPVVDNLFFSSVSKVGGTNSVLNLSGRGIEAMYRLNVGGPEITPDQDLDLWRTWDVDSSYMFTANAGSEVHNSSNITYASMNDSVVAPLAVYETARSMSNTEVLEKRFNMSWKFEVDPDFEYLIRLHFCELFYERANQRSFRIYINNRTAADNFDVFLRAGGMNKAYHQDFLDMVSSKINTLWIQLGPDTTVGASGTDAILNGLEIFKLSRNGNLAYVERFDSTKSSAGSKTSKTQTLWVGLGAGVASIAMMAVIFSLIFYFCKRWRKKSSATKNKSPGWRPLFLHVNSTNAKGMSQSLSVSLASNRAGKRFTLTEIRAATNNFDESLVIGVGGFGKVYKGEIDDGTPAAIKRANPQSEQGLAEFQTEIEMLSKLRHRHLVSMIGFCEEQNEMILVYEYMANGTLRSHLFGSELPPLTWKQRLEACIGAARGLHYLHTGAERGIIHRDVKTTNILIDENFVAKMADFGLSKTGPAWEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPSLPRDQINLAEWAMHWQHQRSLETIIDPHLKGNYSPDSLRKFGEIAEKCLADEGKNRPTMGEVLWHLEYVLQLHEAWLRTNVGENSFSSSQALGNLEEGLESAHLDEENEISLKMKQKRESATRGINA* 845
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8903916 8907377 + Vvi10g554 Vvi10g554 771153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g554 844 PANTHER OSJNBA0058K23.13 PROTEIN 15 823 - -
Vvi10g554 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Vvi10g554 844 SMART serkin_6 513 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g554 844 Gene3D Phosphorylase Kinase; domain 1 475 588 - -
Vvi10g554 844 ProSiteProfiles Protein kinase domain profile. 513 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g554 844 MobiDBLite consensus disorder prediction 823 844 - -
Vvi10g554 844 Pfam Malectin-like domain 28 397 IPR024788 -
Vvi10g554 844 MobiDBLite consensus disorder prediction 823 837 - -
Vvi10g554 844 Pfam Protein tyrosine and serine/threonine kinase 518 780 IPR001245 GO:0004672|GO:0006468
Vvi10g554 844 CDD STKc_IRAK 519 784 - -
Vvi10g554 844 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Vvi10g554 844 Gene3D - 218 400 - -
Vvi10g554 844 Gene3D - 24 192 - -
Vvi10g554 844 SUPERFAMILY Protein kinase-like (PK-like) 491 785 IPR011009 -
Vvi10g554 844 Gene3D Transferase(Phosphotransferase) domain 1 589 803 - -
Vvi10g554 844 PANTHER OS07G0166700 PROTEIN 15 823 IPR045272 GO:0004714|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76001 PF12819 Malectin_like 3.60E-35 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g554 - - vvi:100247404 1669.83