Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g618 | ATGGATTCTGCAAGGAGCTGGTTTAAAAAATTTCATCCTAAAAAGGATAAAATGAGTTCTAACAAAGAGACAGACAATATGAAGGATTTGTATAAGCCTCCAGTGGATGAGGCTCCTTCAAATTCCACAAAAGAGAAGGTTGCTGCCGCAAAGCATTATATCGAGAATCATTACAAAGCACAAATGAAAAATCTGCAAGACAGAAAGGAGAGACGCTGGGTCTTGGAGAGGAAACTTGCTGATGCTGATGTATCTGAGGAAGAGCAAATCAATCTTCTGAAATATTTTGAGAGAAAGGAGACAGAGTATATGCGTATCCAAAGACATAAGATGGGTGTTGATGACTTTGAACTTTTGACCATTATAGGAAGAGGTGCCTTTGGAGAGGTGAGACTTTGCAGAGAAAAAACTACTGGCCATGTGTATGCCATGAAAAAGCTCAAGAAATCAGAGATGCTTCGGAGGGGCCAGGTGGAACATGTTAAAGCTGAACGGAATCTTCTTGCTGAGGTTGACAGTGCTTGCATTGTCAAGCTTTATTGCTCCTTTCAAGATCAAGAATTTTTATATCTTATAATGGAATATCTTCCGGGGGGTGACATGATGACGTTACTAATGCGCAAGGATACCTTGACTGAGGATGAGGCAAGGTTTTATGTTGGGCAGACAGTCCTTGCCATTGAGTCTATTCACAAGCACAACTACATCCACAGGGATATCAAGCCTGACAATTTATTGCTTGATCGTTATGGCCATATGAAACTTTCAGATTTTGGGTTGTGCAAACCCTTGGACTGTAGTAGTTTTCCCAATCTTAGTGAGAATGACTATGGAGTGGGAAAAAATATCAAACCTACATTAGACAGTGACAAACATTCTAACATGCCTTCTGCACCGAGGCGGACTCAGCAGGAACAATTATTACACTGGCAAAAGAACAGAAGAATGTTGGCTTATTCAACAGTTGGGACTCCCGACTACATTGCCCCAGAAGTACTGCTGAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCTCTTGGGGCAATTATGTATGAGATGCTTGTGGGATATCCACCTTTTTATTCTGAGGAACCAATGTCAACATGCAGAAAGATAGTAAATTGGAGAACACACTTGAAATTCCCTGAAGAGGCGAAGCTTTCTGCAGAGGCTAAAGATCTCATAAGCAGACTCCTGTGCAATGTGGCACACAGGCTAGGGACTAAAGGAGCACATGAAATCAAAGCACACCCATGGTTTAAAGGTATCCAATGGGAAAGCTTATATCAGATGGAAGCTGCTTTTGTACCAGAGGTTAATGATGAGTTAGACACACAGAACTTTGAGAAATTTGAAGAGTTGGGGACTACAGCTCAATCGTCATCAAGGTCAGGTCCCTGGAAGAAGATGCTTCCATCCAAGGATGTAAATTTCGTTGGTTATACATACAAGAATTTTGAAATTGTCAACGAGCATCATGTGCCTGGCATTGCTGAGTTAAAGAAAAAGACGAATAAACCGAGGAGGCCATCTATCAAGACACTGTTTGATACCCCTGATCCTCCTGATCAGCCTGTTCAGGGAAGCTTTATTAACCTTTTGCCTACTCAAGTGGAGGTCTCTGAAAGCCCTGAGCAATCACCTCAATCTAACAGACCGCCGAAATACCCACAAAGACCTATGCAAAGATGA | 1695 | 41.89 | MDSARSWFKKFHPKKDKMSSNKETDNMKDLYKPPVDEAPSNSTKEKVAAAKHYIENHYKAQMKNLQDRKERRWVLERKLADADVSEEEQINLLKYFERKETEYMRIQRHKMGVDDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSACIVKLYCSFQDQEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGQTVLAIESIHKHNYIHRDIKPDNLLLDRYGHMKLSDFGLCKPLDCSSFPNLSENDYGVGKNIKPTLDSDKHSNMPSAPRRTQQEQLLHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSEEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLISRLLCNVAHRLGTKGAHEIKAHPWFKGIQWESLYQMEAAFVPEVNDELDTQNFEKFEELGTTAQSSSRSGPWKKMLPSKDVNFVGYTYKNFEIVNEHHVPGIAELKKKTNKPRRPSIKTLFDTPDPPDQPVQGSFINLLPTQVEVSESPEQSPQSNRPPKYPQRPMQR* | 565 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10675635 | 10698700 | + | Vvi10g618 | Vvi10g618 | 771217 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g618 | 564 | MobiDBLite | consensus disorder prediction | 500 | 564 | - | - | |
Vvi10g618 | 564 | ProSitePatterns | Protein kinases ATP-binding region signature. | 122 | 145 | IPR017441 | GO:0005524 | |
Vvi10g618 | 564 | SMART | pkinase_C_6 | 422 | 486 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Vvi10g618 | 564 | Pfam | Protein kinase C terminal domain | 440 | 484 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Vvi10g618 | 564 | MobiDBLite | consensus disorder prediction | 530 | 550 | - | - | |
Vvi10g618 | 564 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Vvi10g618 | 564 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 422 | 494 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Vvi10g618 | 564 | CDD | STKc_NDR_like | 114 | 485 | - | - | |
Vvi10g618 | 564 | Pfam | Protein kinase domain | 117 | 421 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g618 | 564 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 27 | 523 | - | - | |
Vvi10g618 | 564 | Gene3D | Phosphorylase Kinase; domain 1 | 114 | 199 | - | - | |
Vvi10g618 | 564 | Gene3D | Phosphorylase Kinase; domain 1 | 440 | 450 | - | - | |
Vvi10g618 | 564 | SMART | serkin_6 | 116 | 421 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g618 | 564 | ProSiteProfiles | Protein kinase domain profile. | 116 | 421 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g618 | 564 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 235 | 247 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi10g618 | 564 | Gene3D | Transferase(Phosphotransferase) domain 1 | 200 | 264 | - | - | |
Vvi10g618 | 564 | Gene3D | Transferase(Phosphotransferase) domain 1 | 317 | 439 | - | - | |
Vvi10g618 | 564 | SUPERFAMILY | Protein kinase-like (PK-like) | 98 | 473 | IPR011009 | - | |
Vvi10g618 | 564 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Vvi10g618 | 564 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 27 | 523 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76012 | PF00069 | Pkinase | 2.20E-64 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g618 | K08790 | - | vvi:100244001 | 1153.66 |