Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g640 ATGGAGAGCGTTTATTGGGTGCATTTAATGGTGGTGCTTTGCTTGGGGACGTTTATGGGTATAGTTTGTCAGGATGGTGCAGATGAGGTTACAGCTGTTTATATTGTTACTCTGAAGCAAACTCCTACTTCTCATTACTATGGTGAGCTGAGAAAGGGGACCAATGTTTTCAGGCATGGTGTTCCTGGGAAGTTGGATAGACTTCACACACCAAGGAGGAATATTTCAAGATCTGATCCTCATTATAATTCGTATATTTCCCGAGTTCATGATTCATTGCTGAGGAGGGCATTGAGAGGAGAACAATATCTGAAGCTGTATAGCTACCACTACTTGATTAATGGATTTGCGGTGTTTGTTACTTCCCAGCAGGCAGAGAAGCTTGCAAAGAGGAGAGAAGTGGCAAATGTGGTTTTGGATTTCTCGGTTAGAACCGCAACCACCCACACTCCTCAATTCCTGGGTCTACCTCAAGGGGCATGGGTCCAAGAAGGTGGATATGATTCTGCTGGGGAGGGAATTGTGATTGGATTTATTGATACAGGCATTGATCCTACACATCCCAGCTTTGCTGTTGATAGATCTGAAGTTGCCTATCCAGTTCCAGCTCATTTTTCTGGCATCTGTGAAGTGACCCCTGATTTCCCATCTGGGTCCTGCAACAGAAAGCTTGTTGGGGCCCGCCATTTTGCAGCATCTGCAATAACCAGAGGAATATTTAATGCAAGTCAGGACTATGCTTCACCATTTGACGGTGATGGCCATGGAACGCACACGGCATCCATTGCAGCAGGGAACCATGGGATTCCAGTGGTGGTGGCCGGGCATCACTTTGGAAATGCGAGTGGAATGGCTCCTCGTGCACACATTGCTGTTTACAAGGCACTCTACAAAAGTTTCGGAGGCTTTGCTGCAGATGTTGTTGCTGCGATAGACCAGGCAGCTCAGGATGGAGTTGACATAGTAAGCTTGTCAATCACTCCCAACAGGCGTCCCCCTGGAATTGCAACTTTTTTTAATCCCATAGATATGGCCTTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTTGTTCAAGCAGCTGGAAATACTGGACCATCACCAAAGAGCGTTTCTTCCTTTAGTCCATGGATCTTCACTGTTGGTGCTGCAGCTCATGATAGAGCCTACAGTAACTCGATTGTCCTAGGCAACAACGTTACCATTCCTGGAGTTGGACTTGCACCCGGAACACATAGAGGTAGAATGTATACGCTGGTTTCTGCTCTTCATGCTCTAAACAATGACACAACAATTGCCAATGATATGTATGTGGGTGAATGCCAAGACTCCAGTAGCTTGAAGCAAGATCTGGTACAAGGGAACCTCTTGATCTGTAGCTATTCAATTCGATTTGTGCTTGGGCTCTCCACCATCAAGCAGGCATTGCAAACTGCAAAAAACCTCAGTGCAGCTGGTGTTGTATTCTACATGGATCCTTTTGTAATTGGATTTCAGCTTAATCCAATTCCAATGAAAATGCCGGGCATAATAATTTCATCCCCAGATGATTCAAAGATTTTTCTGCAATACTACAATCATTCTTTGGAGAGGCAAGGGTCTACAAAGGAAATTGTTAAATTTGGGGCAGCTGCTAGCATTTCAGGTGGGCTAAAGCCAAATTACAGCAACTCTGCTCCAAAGGTTATGTACTATTCTGCTAGAGGACCAGATCCAGAAGACAGTTTCCTTGATGATGCTGACATAATGAAACCCAACTTGGTAGCTCCTGGGAATTTTATATGGGCTGCTTGGAGTTCCCTTGGCACAGATTCTGTTGAATTCCTAGGAGAGAACTTTGCAATGATGTCTGGGACAAGCATGGCTGCTCCTCATGTTTCTGGGCTTGCAGCATTGATTAAGCAGAAGTTTCCCAAGTTCAGTCCGTCGGCCATTGGATCTGCACTTTCCACTACAGCTTCTCTATACAACAGGAATGGTGGGCCTATAATGGCTCAGCGTGCTTATGCAAATCCAGATTTAAACCAGTCTCCAGCAACACCCTTTGACATGGGAAGTGGCTTTGTGAATGCAACTGCAGCATTAGACCCTGGTCTGATATTCGATGCAAGTTATGATGATTATATGTCATTCCTTTGTGGCATCAATGGGTCAGCTCCTATGGTTCTGAACTACACTGGTGAGATGTGTGGAGTTTCCACCATGAATGGCACTGACATAAACTTGCCCTCAATCACAATAGCGAGACTAGAACAGACTAGAACTGTCCAAAGAAGAGTGACAAACGTTGACAGCAATGAGACTTACATAGTTGGTTGGAGTGCTCCTTATGGGGTTTCAGTAAATGTAGTTCCAACTCACTTCTTTATAGCATGTGGGGAAACACAGACCTTGACTGTAACCTTGAGTGCTACAATGAACAGCACAGCTGCTAGCTTTGGAAGGATAGGACTGGTTGGAAAGGGAGGTCACATTGTTAACATTCCAGTAGCAGTCATCTTTAAAGCCAAATATAACAATACTAACAGGTGA 2529 44.76 MESVYWVHLMVVLCLGTFMGIVCQDGADEVTAVYIVTLKQTPTSHYYGELRKGTNVFRHGVPGKLDRLHTPRRNISRSDPHYNSYISRVHDSLLRRALRGEQYLKLYSYHYLINGFAVFVTSQQAEKLAKRREVANVVLDFSVRTATTHTPQFLGLPQGAWVQEGGYDSAGEGIVIGFIDTGIDPTHPSFAVDRSEVAYPVPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVVVAGHHFGNASGMAPRAHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIVSLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPKSVSSFSPWIFTVGAAAHDRAYSNSIVLGNNVTIPGVGLAPGTHRGRMYTLVSALHALNNDTTIANDMYVGECQDSSSLKQDLVQGNLLICSYSIRFVLGLSTIKQALQTAKNLSAAGVVFYMDPFVIGFQLNPIPMKMPGIIISSPDDSKIFLQYYNHSLERQGSTKEIVKFGAAASISGGLKPNYSNSAPKVMYYSARGPDPEDSFLDDADIMKPNLVAPGNFIWAAWSSLGTDSVEFLGENFAMMSGTSMAAPHVSGLAALIKQKFPKFSPSAIGSALSTTASLYNRNGGPIMAQRAYANPDLNQSPATPFDMGSGFVNATAALDPGLIFDASYDDYMSFLCGINGSAPMVLNYTGEMCGVSTMNGTDINLPSITIARLEQTRTVQRRVTNVDSNETYIVGWSAPYGVSVNVVPTHFFIACGETQTLTVTLSATMNSTAASFGRIGLVGKGGHIVNIPVAVIFKAKYNNTNR* 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11406805 11422896 - Vvi10g640 Vvi10g640 771239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g640 842 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Vvi10g640 842 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Vvi10g640 842 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Vvi10g640 842 CDD PA_subtilisin_like 392 527 - -
Vvi10g640 842 CDD Peptidases_S8_3 146 653 IPR034197 -
Vvi10g640 842 Gene3D - 386 547 - -
Vvi10g640 842 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Vvi10g640 842 Gene3D - 711 833 - -
Vvi10g640 842 Pfam Subtilase family 171 657 IPR000209 GO:0006508|GO:0008236
Vvi10g640 842 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 144 IPR037045 -
Vvi10g640 842 Pfam Fibronectin type-III domain 738 831 IPR041469 -
Vvi10g640 842 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252|GO:0006508
Vvi10g640 842 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Vvi10g640 842 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 19 834 - -
Vvi10g640 842 Pfam Peptidase inhibitor I9 33 146 IPR010259 -
Vvi10g640 842 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Vvi10g640 842 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252|GO:0006508
Vvi10g640 842 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 834 IPR045051 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g640 - - vvi:100242573 1679.46