Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g660 ATGAATTTTAAAGTGAAACGAGCTTCTCATCATCCACTTCATCTTCCTCATCTGGGTTGCATGACCACCTTCTTCTTCTTCTTCATCTTCTCGTTATTTCAAGGATCAACTGCTCAGAATGCTACTTTGGACGCATCTGAAGCTGAAGCATTGAACTCAATATTCCAACAATGGGACACACAGTCGGCGGCATTGTGGAACATCAGTGGGGAGCCATGCACCGGGTCAGCCATAAGTGGGAGTGGATTTGAGGAGACAGCTAACAACCCAGCTATCACTTGTGACTGTACTTACAATAATTCTACCACCTGCCACATTACTCAGCTGAGAGTGTATGCTTTGAACAGAAGAGGAGTCATTCCAGAGGAACTCACAGCTCTGACTTATCTCACCTTTTTGAAGATTGATCAAAATTACTTCACAGGTCCTTTGCCTTCATTTATTGGAAATTTATCCAAATTGCAATTATTGTCACTTGCTCACAATGCACTCTCTGGGACCATTCCAATGGAACTTGGAAATCTCCAGGAACTAACAGTGTTGTCCTTAAGTTCAAATAATTTTTCTGGTACTCTTCCTCCAGAACTTGGAAATCTGGTTAACCTTCGGGAACTTTATATTAACAGCCTTGGCGTAGGTGGTGAGATTCCCTCAACATTTGCTAACCTTGAGAACATGCAAGTCATGCGGGCATCAGACTGTCCATTCAGTGGAAAGATACCAGACTTCATTGGGAACTGGACCAAGCTTACATCTTTGAGGTTTCAAGGTAACTCTTTTGAAGGTCCAATACCTTCCAGTTTTTCTAAATTGACCTCATTGAGCTCTCTGCGAATAAGTGATTTATTCAATGTGAGCTCATCTCTTGATTTCATTAAGGATTTGAAGAACTTAACCGACTTAGTTCTGAGGAATGCATTAATCACTGGAAGTATTCCCTCTTACATAGGAGAATTCCAAAGTTTGCAAAGATTGGATTTAAGTTTCAACAACTTAACCGGTGGAATCCCCAGTTCGTTGTTCAACTTGGGTTCTCTCGCTAACTTGTTTCTCGGAAACAATAGCCTGTCTGGAACTCTTCCAACCCAAAAAAGTAAACAACTCCAAAATATAGATTTGTCTTACAATGAACTTTCAGGAAGTTTTCCTTCATGGGTAACCTCAGGTTTACAATTGAATTTAGTGGCCAACAACTTCACATTTGATAGCTCAAACAGAAGTCTTTTGCCAGGATTGAATTGTCTACAGAGAAACTTCCCATGCAATAAGAATACTCCACGCTATGCCAACTTCTCGATCAAGTGTGGTGGCTCAGAGATGAGAAATGCAGAAGGCATAGTGTATGAGGCTGAAAACTCAACTCTTGGAGCAGCATCTTATTATGTTACCAGTACAGAAAAATGGGCAGTGAGCAATGTGGGGTTGTTTTCTGACAGAAGCAATCCATCATATGTTGATAACAACTTGATGCAAGTTACCGGCACTAATACTCCAGAGCTTTTCCAGAGTTCAAGGATATCACCTGGATCACTTAGATACTATGGCCTGGGACTTGAAAATGGACCTTACATAGTAAGTTTGGAATTTGCGGAAACAGTATTTAAAGATCGAGATACACAAACTTGGGAGAGTCTAGGCAGGCGTGTTTTTGATATTTACATTCAGGGAGCCCTTCAATTCAAAGACTTTGACATATCAAAAGAGGCTGGTGGGGTTGAGAGAGCACTTGAGAAAAAATTCTATGCTACTGTATCAGAAAACTATCTCGAAATTCATCTGTTTTGGGCCGGTAAGGGAACCTGCTGCAATCCAATCCAGGGTTATTATGGACCATCCATTTCAGCTCTCAGTGTTGTTTCAGATTTTACACCAACTGTAGCTGGAAATCCACCAATTCCTCCCTCAAAGAAGAACAACACTGGGTTGATTGTGGGTGTTGCAGTTTCTGTTGGAGTTGTGAGCATGATACTGATATGTTCAGTTCTTTACATAAAAAGGAAAGCTTCATATGTCAATGAGGATGAAGAGTTTCTTGGAATAGGCCCTAGACCAAACACTTTCAGTTATTCAGAGTTACGAACTGCAACAGAAGACTTCAATCCTGCAAATAAGCTAGGGGAGGGTGGATTTGGGCCTGTGTACAAGGGCACCCTTAATGATGGGAGGGTAGTAGCTGTGAAGCAACTTTCAGTAGCATCTCAACAAGGGAAGAGTCAATTTGTGGCAGAGATTGCTGCCATATCTGCAGTGCAGCATCGAAACCTTGTGAAGTTGTATGGGTGCTGCATTGAAGGAAATAGACGGCTCCTTGTTTACGAACATCTTGAAAACAAGAGCTTAGATCAGGCTCTCTTTGGCAAAAATGATTTGCATCTTGATTGGTCAACCCGCTTCAATATATGCTTAGGAACAGCTAGAGGGTTGGCTTATCTTCATGAAGACTCAAGGCCAAGGATTGTACACAGGGATGTTAAGGCTAGTAACATTCTCCTTGATGCAGAGCTCTTCCCAAAAATATCAGATTTTGGACTGGCAAAGCTGTATGATGACAAGAAAACACACATCAGCACCCGAGTTGCAGGCACAATTGGATACCTAGCACCAGAGTATGCAATGCGAGGGCATCTGACAGAAAAAGCTGATGTCTTTGGATTCGGTGTTGTTGCTCTAGAGATCCTCAGTGGGAGGCCAAACTCTGATAACAGCTTGGATACTGAAAAGATATATCTTCTGGAATGGGCATGGAATCTACATGAAAATAACCGAAGCTTGGAGCTGGTGGATCCAACATTGACAGCATTTGATGATAGTGAAGCCAGTCGGATCATAGGAGTGGCTCTCTTGTGCACCCAGGCATCACCAATGCTGCGGCCAACAATGTCGCGTGTTGCAGCAATGCTTGCAGGAGACATTGAAGTAGGCATAGTTACAGCAAAACCCAGTTACTTAACAGATTGGGATTTCAAAGACATAACAAACAGCTTTTTGAAAGAAGATAGTCAGGCATCTGTAGCATCTAAGAGCCGGAAGCAGGATAATACAGCTGATCAAATGCCTTCCCCTGTTAGTCCCACTGAACCAATGCTCCATGAGATCATTGGAGAAGGAAGGTGA 3114 42.26 MNFKVKRASHHPLHLPHLGCMTTFFFFFIFSLFQGSTAQNATLDASEAEALNSIFQQWDTQSAALWNISGEPCTGSAISGSGFEETANNPAITCDCTYNNSTTCHITQLRVYALNRRGVIPEELTALTYLTFLKIDQNYFTGPLPSFIGNLSKLQLLSLAHNALSGTIPMELGNLQELTVLSLSSNNFSGTLPPELGNLVNLRELYINSLGVGGEIPSTFANLENMQVMRASDCPFSGKIPDFIGNWTKLTSLRFQGNSFEGPIPSSFSKLTSLSSLRISDLFNVSSSLDFIKDLKNLTDLVLRNALITGSIPSYIGEFQSLQRLDLSFNNLTGGIPSSLFNLGSLANLFLGNNSLSGTLPTQKSKQLQNIDLSYNELSGSFPSWVTSGLQLNLVANNFTFDSSNRSLLPGLNCLQRNFPCNKNTPRYANFSIKCGGSEMRNAEGIVYEAENSTLGAASYYVTSTEKWAVSNVGLFSDRSNPSYVDNNLMQVTGTNTPELFQSSRISPGSLRYYGLGLENGPYIVSLEFAETVFKDRDTQTWESLGRRVFDIYIQGALQFKDFDISKEAGGVERALEKKFYATVSENYLEIHLFWAGKGTCCNPIQGYYGPSISALSVVSDFTPTVAGNPPIPPSKKNNTGLIVGVAVSVGVVSMILICSVLYIKRKASYVNEDEEFLGIGPRPNTFSYSELRTATEDFNPANKLGEGGFGPVYKGTLNDGRVVAVKQLSVASQQGKSQFVAEIAAISAVQHRNLVKLYGCCIEGNRRLLVYEHLENKSLDQALFGKNDLHLDWSTRFNICLGTARGLAYLHEDSRPRIVHRDVKASNILLDAELFPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEILSGRPNSDNSLDTEKIYLLEWAWNLHENNRSLELVDPTLTAFDDSEASRIIGVALLCTQASPMLRPTMSRVAAMLAGDIEVGIVTAKPSYLTDWDFKDITNSFLKEDSQASVASKSRKQDNTADQMPSPVSPTEPMLHEIIGEGR* 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12006748 12023607 - Vvi10g660 Vvi10g660 771259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g660 1037 MobiDBLite consensus disorder prediction 999 1021 - -
Vvi10g660 1037 Gene3D Transferase(Phosphotransferase) domain 1 775 974 - -
Vvi10g660 1037 SMART serkin_6 699 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g660 1037 Pfam Malectin domain 431 616 IPR021720 -
Vvi10g660 1037 SUPERFAMILY L domain-like 102 384 - -
Vvi10g660 1037 Pfam Protein kinase domain 702 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g660 1037 SUPERFAMILY Protein kinase-like (PK-like) 681 967 IPR011009 -
Vvi10g660 1037 CDD STKc_IRAK 705 967 - -
Vvi10g660 1037 ProSiteProfiles Protein kinase domain profile. 699 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g660 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Vvi10g660 1037 MobiDBLite consensus disorder prediction 999 1037 - -
Vvi10g660 1037 PANTHER BNAC03G71060D PROTEIN 107 1014 - -
Vvi10g660 1037 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 107 1014 - -
Vvi10g660 1037 Gene3D Phosphorylase Kinase; domain 1 671 774 - -
Vvi10g660 1037 Gene3D - 429 622 - -
Vvi10g660 1037 Gene3D Ribonuclease Inhibitor 285 402 IPR032675 -
Vvi10g660 1037 Gene3D Ribonuclease Inhibitor 44 284 IPR032675 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76014 PF00069 Pkinase 1.40E-44 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g660 - - vvi:100261421 2045.01