Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g663 ATGAGCATCATATTGATATGTGCAGTTCTTTACATAAAAAGGAAAGCTTCCTATCTCAATGAGGATGAAGAGTTTCTTGGAATAGGCCCTAGACCAAACACTTTCAGTTCTTCAGAGTTAGAAACTGCAACAGAAGACTTCAATCTTGCAAATAAGCTAGGGGAGGGTGCATTTTGGCCTGTGTACAAGGGCGCTCTTAATGATGGGAGGGTAGTAGCTGTAAAGCAACTTTCAGTAGCATCTCAACAAGGGAAGAGTCAATTTGTGGCAGCGATTGCTGCCATATCTGCAGTGCAGCACCGCAACCTTGTGAAGTTGTATGGGTGCTGTATTGAAGGAAATAGATGGCTCCTTGTTTATGAACATCTTGAAAACAAGAGCTTAGATCAGGCTCTCTTTGGCAAAAATGATTTGTATCTTGATTGGTCAATCCGCTTCAATACATGCTTAGGAACAGCTAGAGGGTTGGCTTATCTTCATGAAGACTCAAGGCCAAGGACTGTACACAGGGATGTTAAGGCTAGTAGCATTCTCCTTGATGCAAAGCTCTGCCCAAAAATATCAGATTTTGGACTGGCAAAGCTGTATGATGACAAGAAAACACACATCAGCGGCCGAGTTGCAGGCACAATTGGCTACCTAGCACCAGCGTATGCAATGCGAGGGCATCTGACAGAAAAAGCTGATGCCTTTGGATTCGGTGTTGTTGCTCTAGAGATCCTCAGTGGGAGGCCAAACTCTGATAACAGCTTGGATACTGAAAAAATATATCTTCTGGAATGGGCATGGACTCTACATGAAAATAACCGAAGCTTGGAGCTGGATCCAACATTGACAGCATTTGATGAAACCGAAGCCAGTCAAATCATAGGAGTGGCTCTCTTGTGCACCCAGGCATCACCAATGCTGCGGCCAACAATGTCACGTATTGCAGCAATGCTTGCAGGAGGCATTGATGTAGGCATAGTTACAGCAAAACCCAGTTACTTAACAGATTGA 999 44.14 MSIILICAVLYIKRKASYLNEDEEFLGIGPRPNTFSSSELETATEDFNLANKLGEGAFWPVYKGALNDGRVVAVKQLSVASQQGKSQFVAAIAAISAVQHRNLVKLYGCCIEGNRWLLVYEHLENKSLDQALFGKNDLYLDWSIRFNTCLGTARGLAYLHEDSRPRTVHRDVKASSILLDAKLCPKISDFGLAKLYDDKKTHISGRVAGTIGYLAPAYAMRGHLTEKADAFGFGVVALEILSGRPNSDNSLDTEKIYLLEWAWTLHENNRSLELDPTLTAFDETEASQIIGVALLCTQASPMLRPTMSRIAAMLAGGIDVGIVTAKPSYLTD* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12080840 12082934 - Vvi10g663 Vvi10g663 771262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g663 332 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 332 - -
Vvi10g663 332 SUPERFAMILY Protein kinase-like (PK-like) 30 314 IPR011009 -
Vvi10g663 332 Pfam Protein tyrosine and serine/threonine kinase 48 313 IPR001245 GO:0004672|GO:0006468
Vvi10g663 332 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g663 332 Gene3D Phosphorylase Kinase; domain 1 20 122 - -
Vvi10g663 332 Gene3D Transferase(Phosphotransferase) domain 1 123 320 - -
Vvi10g663 332 PANTHER BNAC03G71060D PROTEIN 17 332 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76015 PF07714 PK_Tyr_Ser-Thr 9.00E-39 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g663 - - vvi:100261421 598.586