Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g681 ATGGCCAAGGTCTCATTTTCCCTTCTCTTTGCTCTCTACTTCCTATTCTTGCAGTGGGGTCTTGTCCCATATACTGCAACTGCATATAATGCATCAGGTCTCAGCTATGATTTCTATGAAAAGAGTTGCCCTAATGTGGAGAGGATCATCCACAATGTGGTCTCTCAGAAGCTTACAGAAGCTTTTTCTACAGCTGGTGGAGCTCTCCGCATCTTCTTCCATGACTGCTTTGTTGAGGGCTGCGATGCATCAGTGTTGATAGCATCAAGCAAGACAAACAAGGCAGAGAGGGATGCTGAAATAAACCTATCACTACCTGGAGACGGTTATGAAGTGTTCTTCAGAGCCAAGAGGGCTTTGGAGTTGCAGTGCCCTGGCATAGTATCTTGCACCGATGTCATGGCAATTGCTACCAGAGACCTGCTTAACTTGGTAGGAGCCCCAAGGTGGGAAGTGCTAAAAGGGAGAAAGGATGGGCTTGTATCCAAGGCTTCAAGAGTGACTGGAAACATTCCAGAACCGACTCAAACAGTCTCTGAACTGATATCTCTCTTCAAGTCCAAAGGGCTGTCTGTCCTAGACATGGTGGCCTTATCCGGAGGCCACACCATAGGTTTCTCACACTGTGACCAATTCATGTCAAGAATCTACAGCTTCAACGAGACATTTGACATAGATCCTACCATGGACAAGGACTATGCCCAAATGCTTCAAGAATCATGTCCAGAGAAGACATTTGATCGAAATATCGTTCTGCCCAATGATGTGAGTACACCACAGGCATTTGACAATGCCTACTACACTAATCTTCAAAAGGGCCTCGGCTTGCTATCAAGCGATCAGATATTGGCTTTGGACCCAACTACTCAGGGTTATGTGAATTCAATGGCCGAAAATCAACAAGTTTTTTTCCGTCACTTTGTTAGAGCCATGATCAAGTTGGGTGAAATTGGTGTTAAGACAGGAAGCAATGGTGAGATCAGACAAGATTGTGGTGTTTTCAACAGTTAA 1011 45.1 MAKVSFSLLFALYFLFLQWGLVPYTATAYNASGLSYDFYEKSCPNVERIIHNVVSQKLTEAFSTAGGALRIFFHDCFVEGCDASVLIASSKTNKAERDAEINLSLPGDGYEVFFRAKRALELQCPGIVSCTDVMAIATRDLLNLVGAPRWEVLKGRKDGLVSKASRVTGNIPEPTQTVSELISLFKSKGLSVLDMVALSGGHTIGFSHCDQFMSRIYSFNETFDIDPTMDKDYAQMLQESCPEKTFDRNIVLPNDVSTPQAFDNAYYTNLQKGLGLLSSDQILALDPTTQGYVNSMAENQQVFFRHFVRAMIKLGEIGVKTGSNGEIRQDCGVFNS* 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12745171 12746877 + Vvi10g681 Vvi10g681 771280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g681 336 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 Gene3D - 37 335 - -
Vvi10g681 336 Gene3D Peroxidase, domain 2 172 314 - -
Vvi10g681 336 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Vvi10g681 336 CDD secretory_peroxidase 33 334 IPR033905 GO:0004601|GO:0042744
Vvi10g681 336 SUPERFAMILY Heme-dependent peroxidases 33 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 Pfam Peroxidase 53 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi10g681 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Vvi10g681 336 PANTHER PEROXIDASE 19 335 - -
Vvi10g681 336 PANTHER - 19 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g681 K00430 - vvi:100254910 668.692