Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10randomg21 ATGGATAAAGGGTCTTTAGCAAGTCGTAAGAAGCTGCTTCGAGCTCAGACAGAAAGAGAGATATTGCAGTCCCTGGACCACCCTTTCCTTCCAACACTCTACACCCACTTTGAGACCGAGAAGTTCTCATGTTTGGTAATGGAGTTCTGCCCGGGAGGAGATTTGCACACTCTTAGACAGAGGCAGCCAGGGAAACATTTTACTGAGCAAGCAGTGAAATTTTATGTAGCAGAGGTCCTCTTAGCTCTAGAATACCTCCACATGCTTGGGATTGTCTACCGAGATCTTAAGCCGGAAAATGTTCTGGTGAGGGATGACGGACACATAATGCTCTCTGACTTTGACCTTTCACTCCGATGTGCTGTTAGCCCAACTCTGGTCAAGACGTGCTCCCTTGAAAAGGACCGCAAACCCAAAAACGAAGTTGGAAACCAAGTCAGCCCATTACCTGAGCTCATTGCTGAGCCAACTGGTGCCCGGTCCATGTCATTTGTTGGGACCCATGAGTACCTGGCTCCTGAGATCATCAAAGGTGAAGGTCATGGAAGTGCTGTAGACTGGTGGACATTTGGGATCTTTCTATATGAACTTTTGTTTGGTAAAACACCCTTCAAGGGATCTGGAAACCGGGCTACATTGTTTAATGTTGTCGGCCAGCCTCTCCGGTTTCCTGAATCACCAGTTGTCAGCTTCTCTGCGAGGGATCTGATAAGGGGACTGCTTGTAAAAGAACCACAGCATAGATTGGCGTTTAAAAGAGGAGCCACTGAGATCAAGCAACACCCCTTCTTTGAAGGTGTGAATTGGGCATTGATACGCTGTGCCACCCCACCTGAGATCCCAAAGCCGGTAGAGATCGAGCGAATACCAGCCCCAACAGCCTCAACAAGTGAAAAGAGCTCAGATAACTATCTGGAGTTTGATTTCTTCTAG 933 47.8 MDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFTEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTCSLEKDRKPKNEVGNQVSPLPELIAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFSARDLIRGLLVKEPQHRLAFKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIERIPAPTASTSEKSSDNYLEFDFF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10randomg21 310 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10randomg21 310 SMART serkin_6 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10randomg21 310 CDD STKc_phototropin_like 1 287 - -
Vvi10randomg21 310 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Vvi10randomg21 310 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 133 - -
Vvi10randomg21 310 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 132 310 - -
Vvi10randomg21 310 PIRSF ILK 1 255 - -
Vvi10randomg21 310 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10randomg21 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Vvi10randomg21 310 PANTHER FLIPPASE KINASE 1-RELATED 132 310 - -
Vvi10randomg21 310 PANTHER FLIPPASE KINASE 1-RELATED 1 133 - -
Vvi10randomg21 310 Gene3D Transferase(Phosphotransferase) domain 1 54 282 - -
Vvi10randomg21 310 SUPERFAMILY Protein kinase-like (PK-like) 4 297 IPR011009 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76028 PF00069 Pkinase 7.60E-53 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10randomg21 K08286 - vvi:100854807 600.512