Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10randomg21 | ATGGATAAAGGGTCTTTAGCAAGTCGTAAGAAGCTGCTTCGAGCTCAGACAGAAAGAGAGATATTGCAGTCCCTGGACCACCCTTTCCTTCCAACACTCTACACCCACTTTGAGACCGAGAAGTTCTCATGTTTGGTAATGGAGTTCTGCCCGGGAGGAGATTTGCACACTCTTAGACAGAGGCAGCCAGGGAAACATTTTACTGAGCAAGCAGTGAAATTTTATGTAGCAGAGGTCCTCTTAGCTCTAGAATACCTCCACATGCTTGGGATTGTCTACCGAGATCTTAAGCCGGAAAATGTTCTGGTGAGGGATGACGGACACATAATGCTCTCTGACTTTGACCTTTCACTCCGATGTGCTGTTAGCCCAACTCTGGTCAAGACGTGCTCCCTTGAAAAGGACCGCAAACCCAAAAACGAAGTTGGAAACCAAGTCAGCCCATTACCTGAGCTCATTGCTGAGCCAACTGGTGCCCGGTCCATGTCATTTGTTGGGACCCATGAGTACCTGGCTCCTGAGATCATCAAAGGTGAAGGTCATGGAAGTGCTGTAGACTGGTGGACATTTGGGATCTTTCTATATGAACTTTTGTTTGGTAAAACACCCTTCAAGGGATCTGGAAACCGGGCTACATTGTTTAATGTTGTCGGCCAGCCTCTCCGGTTTCCTGAATCACCAGTTGTCAGCTTCTCTGCGAGGGATCTGATAAGGGGACTGCTTGTAAAAGAACCACAGCATAGATTGGCGTTTAAAAGAGGAGCCACTGAGATCAAGCAACACCCCTTCTTTGAAGGTGTGAATTGGGCATTGATACGCTGTGCCACCCCACCTGAGATCCCAAAGCCGGTAGAGATCGAGCGAATACCAGCCCCAACAGCCTCAACAAGTGAAAAGAGCTCAGATAACTATCTGGAGTTTGATTTCTTCTAG | 933 | 47.8 | MDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFTEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTCSLEKDRKPKNEVGNQVSPLPELIAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFSARDLIRGLLVKEPQHRLAFKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIERIPAPTASTSEKSSDNYLEFDFF* | 311 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10randomg21 | 310 | Pfam | Protein kinase domain | 11 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10randomg21 | 310 | SMART | serkin_6 | 1 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10randomg21 | 310 | CDD | STKc_phototropin_like | 1 | 287 | - | - | |
Vvi10randomg21 | 310 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 53 | - | - | |
Vvi10randomg21 | 310 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 1 | 133 | - | - | |
Vvi10randomg21 | 310 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 132 | 310 | - | - | |
Vvi10randomg21 | 310 | PIRSF | ILK | 1 | 255 | - | - | |
Vvi10randomg21 | 310 | ProSiteProfiles | Protein kinase domain profile. | 1 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10randomg21 | 310 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 91 | 103 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi10randomg21 | 310 | PANTHER | FLIPPASE KINASE 1-RELATED | 132 | 310 | - | - | |
Vvi10randomg21 | 310 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 133 | - | - | |
Vvi10randomg21 | 310 | Gene3D | Transferase(Phosphotransferase) domain 1 | 54 | 282 | - | - | |
Vvi10randomg21 | 310 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 297 | IPR011009 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76028 | PF00069 | Pkinase | 7.60E-53 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10randomg21 | K08286 | - | vvi:100854807 | 600.512 |