Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10randomg5 | ATGGCGGTGAACGGAGCTCTGTCTTTCTCTTGCTCTCACTCACACTCTCGCTTCTTCTTCGCTCTTCTAGTGTTGTTCTCCTTCTCTGCGATCCTTCCCCCGTTGTCTGTTTACGGCGCTACTGATCCTTCTGATGTTCAAGGTCTTCAGGTTATTTACAATTCACTGAATGGTCCTTCCCAGCTAACTGGTTGGACAAATAGTAGTGGTGATCCGTGTGGAGAGTCATGGAAAGGGGTTACTTGTGAGGGTTCAGCTGTTGTTTCCATTCAGATTTCCGGGTTAGGGCTGAATGGAACCATGGGATACTTGCTCTCAAACTTTTTGTCATTGAGGACATTAGATATGAGTGACAACAACATTCACGACACAATTCCATATCAGTTACCGCCAAATCTCACAAACTTAAACCTGGCGAGCAACAATTTAACTGGGAGTTTTCCGTATTCCATTTCTACCATGGTTTCTCTTAATTATTTGAATGTTAGCCACAATTCAATCTCCCAGTCAATTGGAGACATATTTGCTAAACTTGCTGGCCTCACAATCTTGGATCTCTCTGTGAACAACTTTACTGGAGATCTTCCTAATTCCTTTACTTCATTGTCCAATCTTTCTACCCTCTATTTGCAGAACAATCAATTAACTGGTCCTCTGAGTGTTCTTACTGGTTTGCCTTTGACTGATCTAAATGTTGCAAACAACAATTTCAGTGGATGGATACCATCAGAGCTTAGATCAATCCGAAAATTTATATATGATGGAAATTCATTCGACAATGGTCCTGCTCCTCCTCCTCCACCGTATACCCCACCTCCTCCCAGTAGATCTCGTAGTAATCGCACTCATTCTCCACCAGAAGCACGCACGCCCTCAAGTTCTGATGGCCAGTCATCGAACTCAGATAATGGAAATAAGGGCTTGGCCATTGGTCCTATTATAGGCATTGTTCTAGGTTCATTGCTGGTTCTTGTTGCATTGATTGCTCTTGTTTTTTGTGTTCGAAAAGCTAAAAAGAAGGGAACTGGTGCAAGACCATCTGTGGGAAGTGTTCCTGTTGTCACAGAAAAAGTAAATACAGAAACAATGCAAGAGCAGAGGACAAAGTTCACAGCCACTGTAACAGATCTGAAGCCTCCACCTGCAGAAAACTTGATGGTTGAGAGGGTACAAGGGAAAAATGGATCTGGAAAGAGAGTTAAATCCCCTATAACTGCTACCTCATACACCGTTGCTTCTCTTCAAACAGCAACAAACAGCTTTAGTCAAGAATTTCTTATTGGTGAAGGTTCCCTTGGCCGTGTTTATAGAGCTGATTTTCCAAATGGAAAGACAATGGCAATTAAGAAGATAGACAATGCAGCACTGTCTTTACAAGAAGAAGATAATTTTCTTGAGGCTGTTTCAAATATGTCCCGTCTGAGGCACCAAAACATTGTTACACTAGTGGGATATTGTGCAGAGCATGGGCAACGTCTTCTGGTTTATGAGTATATTGGAAATGGGAGTCTACATGATATGCTGCACTTCACTGATGATAGTGGCAAGACACTGACATGGAATGCACGTGTAAGAGTAGCCCTTGGCACTGCTCGAGCTCTAGAGTATTTGCATGAAGTTTGCCTGCCTTCTACTGTACATAGAAACTTCAAATCGGCAAATATTTTGCTTGATGAAGAGCTCAACCCCCATTTATCAGACTGTGGCCTAGCTGCCCTCACACCAAACACAGAGCGACAGGTTTCAACTCAGATGGTTGGTTCATTTGGTTACAGTGCTCCTGAATTTGCTTTATCTGGTATATACACTGTAAAAAGCGATGTGTACAGCTTTGGGGTGGTGATGTTGGAGCTGTTGACAGGTCGGAAGCCCCTGGACAGTTCAAGAGTGAGATCAGAACAGTCACTTGTGAGATGGGCTACTCCCCAACTTCATGATATAGATGCCCTGGCAAAAATGGTTGATCCTTCCCTAAATGGCATGTATCCTGCAAAGTCTTTGTCACGTTTTGCTGACATCATTGCCTTGTGTGTTCAGCCGGAGCCAGAGTTTCGACCTCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAGTACAAAGAGCAAGTGTGGTCAAGCGGCGCTCAAGTGATGAATCCGGTTTTGTGTACAAGACTCCAGAGCATGAGGCAATTGACATGTCATTTTAA | 2190 | 43.47 | MAVNGALSFSCSHSHSRFFFALLVLFSFSAILPPLSVYGATDPSDVQGLQVIYNSLNGPSQLTGWTNSSGDPCGESWKGVTCEGSAVVSIQISGLGLNGTMGYLLSNFLSLRTLDMSDNNIHDTIPYQLPPNLTNLNLASNNLTGSFPYSISTMVSLNYLNVSHNSISQSIGDIFAKLAGLTILDLSVNNFTGDLPNSFTSLSNLSTLYLQNNQLTGPLSVLTGLPLTDLNVANNNFSGWIPSELRSIRKFIYDGNSFDNGPAPPPPPYTPPPPSRSRSNRTHSPPEARTPSSSDGQSSNSDNGNKGLAIGPIIGIVLGSLLVLVALIALVFCVRKAKKKGTGARPSVGSVPVVTEKVNTETMQEQRTKFTATVTDLKPPPAENLMVERVQGKNGSGKRVKSPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRADFPNGKTMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHQNIVTLVGYCAEHGQRLLVYEYIGNGSLHDMLHFTDDSGKTLTWNARVRVALGTARALEYLHEVCLPSTVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPSLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRSSDESGFVYKTPEHEAIDMSF* | 730 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10randomg5 | 729 | MobiDBLite | consensus disorder prediction | 280 | 303 | - | - | |
Vvi10randomg5 | 729 | Pfam | Protein tyrosine and serine/threonine kinase | 426 | 695 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi10randomg5 | 729 | Pfam | Leucine rich repeat N-terminal domain | 43 | 82 | IPR013210 | - | |
Vvi10randomg5 | 729 | SUPERFAMILY | Protein kinase-like (PK-like) | 400 | 695 | IPR011009 | - | |
Vvi10randomg5 | 729 | MobiDBLite | consensus disorder prediction | 256 | 303 | - | - | |
Vvi10randomg5 | 729 | CDD | STKc_IRAK | 427 | 698 | - | - | |
Vvi10randomg5 | 729 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 | 34 | 725 | - | - | |
Vvi10randomg5 | 729 | SUPERFAMILY | L domain-like | 41 | 248 | - | - | |
Vvi10randomg5 | 729 | ProSiteProfiles | Leucine-rich repeat profile. | 204 | 226 | IPR001611 | GO:0005515 | |
Vvi10randomg5 | 729 | Gene3D | Ribonuclease Inhibitor | 42 | 268 | IPR032675 | - | |
Vvi10randomg5 | 729 | Pfam | Leucine rich repeat | 131 | 191 | IPR001611 | GO:0005515 | |
Vvi10randomg5 | 729 | PANTHER | OS01G0253100 PROTEIN | 34 | 725 | IPR045271 | GO:0004714|GO:0006468 | |
Vvi10randomg5 | 729 | MobiDBLite | consensus disorder prediction | 260 | 279 | - | - | |
Vvi10randomg5 | 729 | Gene3D | Phosphorylase Kinase; domain 1 | 384 | 498 | - | - | |
Vvi10randomg5 | 729 | Gene3D | Transferase(Phosphotransferase) domain 1 | 499 | 723 | - | - | |
Vvi10randomg5 | 729 | ProSiteProfiles | Protein kinase domain profile. | 421 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76029 | PF07714 | PK_Tyr_Ser-Thr | 1.10E-43 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10randomg5 | - | - | vvi:100248686 | 1315.83 |