Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1019 ATGGAGGCCACACAGGAGTTCATTTACCGATCGAAACTTCCCGACATCAACATCCCGAGTCATCTCCCATTACATTCGTATTGCTTCCAGCACATATCCAAATTCAGCTCCAATCCATGCCTCATCAACGCCGGCAATGGCAACATCTACACTTACGCTGATGTCCATCTCACCGCACGTGATGCTATCATGCTTTTACTCCAAAACTGCCCGGAATTTGTCTTCTCATTTCTCGGCGCCTCTTATCTCGGTGCAACTAGCACGACGGCGAACCCCTTTTACACGCCGGCCGAGATTGAGAAGCAAGCCACTGCATCAAGCGCTAGAATTATAATCACTCAAGCTTGTTTTGCCGAGAAAGTGAAGAAATTCGCTGAAGAAAACGATGTGAAAATCATCTGCATTGACGAGCCGGTGGCGGGTTGTTTGCATTTTTCGGAGTTGTCACAGGCCGACGAGAATGACATCCCGGATGTTAACATCAGCCCCGACGATGTTGTCGCGCTGCCTTATTCATCCGGGACGGTGGGGCTTCCAAAAGGGGTGATGCTAACTCACAAAAGCATGATCACCAGTGTCGCTCAGCAGGTCGATGGCGAAAACCCTAATCTGTATTTCCACCTGGACGATGTGATTTTATGCGTGTTACCCATGTTTCACATATATTCCCTGAGCTCAGTTGTGCTTTGTGGCCTTAGAGTTGGGGCTGCAATTCTGATTATGCAGAAGTTTGAGATAAACACACTCATGGAACTTGTTCAGAAACATAAGGTGACTATTGCACCATTTGTTCCTCCAATTCTCTTGGCTATCGCAAAGAGCCCGGTCGCTCACCAGTATGATCTTTCGTCGATTCGGACTGTGATCTCCGGTGCCGCTCCGATGGGGAAGGAGCTTGAAGACAGCCTTGGGTCAAAGCTGCCCAATGCCGTAATTGGACAGGGGTATGGGATGACTGAAGCTGGACCTGTACTATCGATGTGCTTAGCATTTGCAAAGGAACCATTTGAGATAAAATCAGGGGCTTGTGGGACTGTGGTTAGAAATGCAGAGATGAAGATCATCAACCCTGAGACTGGTGCTTCTCTTCCTCCAAATCAAGCAGGAGAGATTTGCATAAGAGGTGACCAAATCATGAAAGGTTATCTTAATGATATTGAGGCCACTAAAGAAGCCATAGACGAAGAAAAATGGCTACACACAGGTGATATCGGATACATAGATGATAATGATGAGCTCTTCATTGTCGATCGATTGAAGGAGATAATTAAAAATAGAGGATTTCAAGTGGCTCCAGCTGAACTTGAAGCAATCTTGATTGCTCATCCTAATATTGTTGATGCTGCGGTTGTACCGATGAAAGATGAAGCTGCGGGAGAGGTTCCAATTGCATTCATTGTGAGATCAAATGGTTTTGAAATCACCGAGGATGAAATAAAGGAATACATCGCAAAACAAGTTGTATATTATAAGAGAATTAAAAGGGTTTTCTTCATTGAGACAATTCCTAAGGCTCCATCTGGTAAAATCCTCAGAAAAGACCTCAAAGCAAAGCTGGCCGCTGGCTTTTCCAATTAA 1578 45.37 MEATQEFIYRSKLPDINIPSHLPLHSYCFQHISKFSSNPCLINAGNGNIYTYADVHLTARDAIMLLLQNCPEFVFSFLGASYLGATSTTANPFYTPAEIEKQATASSARIIITQACFAEKVKKFAEENDVKIICIDEPVAGCLHFSELSQADENDIPDVNISPDDVVALPYSSGTVGLPKGVMLTHKSMITSVAQQVDGENPNLYFHLDDVILCVLPMFHIYSLSSVVLCGLRVGAAILIMQKFEINTLMELVQKHKVTIAPFVPPILLAIAKSPVAHQYDLSSIRTVISGAAPMGKELEDSLGSKLPNAVIGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIINPETGASLPPNQAGEICIRGDQIMKGYLNDIEATKEAIDEEKWLHTGDIGYIDDNDELFIVDRLKEIIKNRGFQVAPAELEAILIAHPNIVDAAVVPMKDEAAGEVPIAFIVRSNGFEITEDEIKEYIAKQVVYYKRIKRVFFIETIPKAPSGKILRKDLKAKLAAGFSN* 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 18842754 18848126 - Vvi11g1019 Vvi11g1019 772460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1019 525 Gene3D - 2 419 IPR042099 -
Vvi11g1019 525 CDD 4CL 18 515 - -
Vvi11g1019 525 Pfam AMP-binding enzyme 58 425 IPR000873 -
Vvi11g1019 525 Gene3D - 420 521 IPR045851 -
Vvi11g1019 525 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 4 520 - -
Vvi11g1019 525 Pfam AMP-binding enzyme C-terminal domain 434 509 IPR025110 -
Vvi11g1019 525 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 520 - -
Vvi11g1019 525 SUPERFAMILY Acetyl-CoA synthetase-like 9 521 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1019 K01904 - vvi:100265063 1032.32