Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1046 ATGAATAGAGGGAAGCGGACTTTGGAGGGGGAGGAGGAGGAGCAGCCGGAGCGGAAGCGGCCGGCTCTCGCAAGTGTAATAGTGGAAGCTCTCAAGGTGGATAGTCTGCAGAAACTTTGCTCATCCTTGGAACCTATTCTTCGTAGAGTTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAATTAGGCCCTGCCAGGCTCAATGGGAGGTCTTCCCCTAAACGAATTGAAGGACCTGATGGAAGGAACTTGCAGTTGCAGTTTAGGTCCAGGCTGTCTCTTCCCCTTTTTACAGGAGGAAAAGTAGAGGGGGAGCAGGGTGCTGCAATCCATATTGTCCTGGTGGATGCCAACAGCGGCAGTGTTGTAACTTCTGGACCTGAATCCTCTGTAAAACTGGATGTTGTTGTCCTTGAAGGTGATTTCAATAATGAAGATGAAGAGGGCTGGACTCAGGAAGAATTTGACAGTCATGTGGTTAAAGAGCGTGAAGGAAAGAGACCACTTTTAACTGGGGACTTGCAAGTAACACTCAAAGAAGGTGTTGGAACACTAGGAGACCTCACATTTACAGATAATTCTAGTTGGATACGGAGCAGGAAGTTTAGGCTTGGGCTGAAGGTTGCCTTGGGATTTTGTGAAGGCATACACATACGTGAAGCCAAAACAGAAGCTTTCACTGTTAAAGATCACAGGGGGGAATTGTATAAGAAACACTATCCACCTGCATTAACTGATGATGTGTGGAGATTGGAGAAGATTGGCAAGGATGGTTCATTCCACAAGAGGCTAAATAATTCCCACATTTACACAGTGGAAGATTTCCTCCGGCTTGTGGTTAGAGACTCCCAAAAATTGCGGAGTATCCTGGGAAGTGGCATGTCAAATAAGATGTGGGAGGCTCTTATAGAGCATGCAAAGACTTGCACCATGAGTGGAAAGTTCTATGTTTATTATTCTGATGATACAAGAAATGTTGGTGTTATTTTTAACAACATCTATGAGCTGAGTGGTCTTATTGCTGGGGAGCAGTATTTCTCTGCTGATTCTCTTTCTGAGAGCCAAAAGGTCTATGTCGATAACTTGGTTAAGAAAGCATACGAAAACTGGAATCAAGTTGAAGAGTATGATGGCAAGTCTTTGAGCTTCAAGCAAATTATCAGGTCAAGTACATCGCGAAATGAACATATGATAGGCTCCATGGATTATCCTACTGCTTTAGAGCCTCTGCTACCTCTTCCACGTCCGCCAGTTGCAGGTCCTTCTGAGCAGTCCTTGATGGATCCAGGCATATCAGTTGGAGGTTCAGGGTACAATGATGGTCTTGCAACCAGATACACGGCTCAGCCCCAGCTTGTAAATTCCAGTTCCCGTGCCCAGTTTGATGGCCCTTCATTCCCTTCACATGACCAGCTGGTCAACAATTCTCACCAAATCCAAAGCACTAGGAACGATAGCAGTGTTGGTTTGGCCCTTGGTCCACCACAGTCATCTACAATGGGGTTCCAGGCTCTCAACTCATCTATTCAGCACTCCAATCTTAACCCTTTTAGTGACTTGTTGAATAACCGAGACAAGGGAGTTGATGACTATTTCACGGAGGAAGAGATTCGGCTTAGAAGTCATGAGATGCTTGAGAGCGATGATATGCAGCAATTGCTCCGAGTCTTCAGCATGGGAGGCCATATTATTCCCGATGATGGGTATGGTTTCCCACCATACATGGCATCGCCTTCAAACTGTCTCTATGAGGAGGAGGATCGAAGCCGTCCTGGAAAAGCTGTTGTCGGTTGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGAAAGCAGCAGAGAAGCGGGCACAGCTTGTTGAGTTAGAAGATGATTAG 1887 46.21 MNRGKRTLEGEEEEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLNGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGAAIHIVLVDANSGSVVTSGPESSVKLDVVVLEGDFNNEDEEGWTQEEFDSHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVALGFCEGIHIREAKTEAFTVKDHRGELYKKHYPPALTDDVWRLEKIGKDGSFHKRLNNSHIYTVEDFLRLVVRDSQKLRSILGSGMSNKMWEALIEHAKTCTMSGKFYVYYSDDTRNVGVIFNNIYELSGLIAGEQYFSADSLSESQKVYVDNLVKKAYENWNQVEEYDGKSLSFKQIIRSSTSRNEHMIGSMDYPTALEPLLPLPRPPVAGPSEQSLMDPGISVGGSGYNDGLATRYTAQPQLVNSSSRAQFDGPSFPSHDQLVNNSHQIQSTRNDSSVGLALGPPQSSTMGFQALNSSIQHSNLNPFSDLLNNRDKGVDDYFTEEEIRLRSHEMLESDDMQQLLRVFSMGGHIIPDDGYGFPPYMASPSNCLYEEEDRSRPGKAVVGWLKIKAAMRWGFFIRKKAAEKRAQLVELEDD* 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19033880 19047271 - Vvi11g1046 Vvi11g1046 772487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1046 628 PANTHER CALMODULIN-BINDING PROTEIN 60 B 2 626 - -
Vvi11g1046 628 Pfam Calmodulin binding protein C-terminal domain 314 376 IPR046829 -
Vvi11g1046 628 PANTHER OS02G0177800 PROTEIN 2 626 IPR012416 GO:0005516
Vvi11g1046 628 Pfam Calmodulin binding protein central domain 244 309 IPR046830 -
Vvi11g1046 628 Pfam Calmodulin binding protein-like N-terminal domain 84 231 IPR046831 -
Vvi11g1046 628 MobiDBLite consensus disorder prediction 1 20 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1046 - - vvi:100264980 1238.02