Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g1070 | ATGGGAGTGGCTAATAACATAGGGAAGTACCAGCTGAGTAGGACGATCGGAGAAGGTACTTTTGCCAAGGTTAAGTTGGCAGTGAACACCGAGAATGGCCAGTATGTTGCCATCAAGATCATCGACAAGCACATGGTCATGGAGAACAATCTCATCTTTCAGGTACAGAGAGAGATAAGAACGATGAAGCTTCTGCATCATCCCAACATTGTTAGGATACATGAGGTCATTGGCACCAAGACAAAGATTTACATAGTAATGGAATATGTATCAGGAGGGCAGCTCTCAGACAAGATGTCTTACGTCAAGAAGCTAGATGAACAGGATGCTAGAAAACATTTCCAGCAGTTGATTGATGCAGTGGACTACTGCCATGGCAGAGGGGTTTCTCATAGAGATCTAAAGCCAGAGAACTTGCTTTTGGACAGCAAAGGAAATGTAAAAGTCTCGGATTTTGGACTCAGTGCATTGCGCAAGCCTGGAGATGTGTTATCCACAGCATGCGGTTCACCATGCTATGTAGCACCAGAGCTGCTTGCAAATAGGGGCTACGATGGAGCAGCTGCAGATATTTGGTCTTGTGGAGTAATCCTTTTTGAGTTACTTGCTGGTTATCTTCCATTTGATGATCGCAATTTGATGAGCTTGTATAAGAAGATAACAAAAGCAGAGTACACTTGTCCAGAGTGGTTCACACCAAGCCAAACAAAGCTAATCTCCAGGATCCTTGAGCCCAACCCTAGACGGCGAATATCAATAGCAGAGATTGTTGAAGATGAGTGGTTTCAGATTGACTACGAACCTGCTTCTGGAATTGAATTTGATGACAAAATCAACCTAGATGATGTTCATGCTGCTTTCAATTTGATTGAGGAAAATAACGCCGAAGCAAAGGTACCCCACTCAAGTTTCATTAATGCTTTCCAACTAATAGCAATGTCACATGACCTCGATTTGTCAGGTCTTTTTGAAGAGAAGGATGACAACAAGCAGAAAGCAAGGTTTGGATCCAAGCACACAATTGATGAAACTATAAAGAAAATTGAGGCCGCTGCAAAGGATGTGAGCCTCTCAGTTGAAAGGAAGAACTCTAAGATGAAGATGCATCCACAACAGAAGATGACTAGATGTTCTCGATCATATTTCAACCTATCAGCAGAGGTGATTGAGGTGGCTCCCACTCATTGTGTTGTAGAAATATCAAAATCTGCAGGCGAGCTTGGTGTGTACAAAGAGTTCTGCACAAGCCTATCATGTCTGCTAAAAGAGAAATCGGGCATTCCATTAGAAGAAAAAGATTCCAATGAAGATGTCGTTAACATCAAAGATATTCAGGAAACTGAATGCTCTGAAAAGAAAGATGACAAGGACGACAAAGACATCAATGGCTATTCTTCCTCTTGA | 1404 | 42.24 | MGVANNIGKYQLSRTIGEGTFAKVKLAVNTENGQYVAIKIIDKHMVMENNLIFQVQREIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVSGGQLSDKMSYVKKLDEQDARKHFQQLIDAVDYCHGRGVSHRDLKPENLLLDSKGNVKVSDFGLSALRKPGDVLSTACGSPCYVAPELLANRGYDGAAADIWSCGVILFELLAGYLPFDDRNLMSLYKKITKAEYTCPEWFTPSQTKLISRILEPNPRRRISIAEIVEDEWFQIDYEPASGIEFDDKINLDDVHAAFNLIEENNAEAKVPHSSFINAFQLIAMSHDLDLSGLFEEKDDNKQKARFGSKHTIDETIKKIEAAAKDVSLSVERKNSKMKMHPQQKMTRCSRSYFNLSAEVIEVAPTHCVVEISKSAGELGVYKEFCTSLSCLLKEKSGIPLEEKDSNEDVVNIKDIQETECSEKKDDKDDKDINGYSSS* | 468 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 19455411 | 19458442 | - | Vvi11g1070 | Vvi11g1070 | 772511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g1070 | 467 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED | 6 | 424 | - | - | |
Vvi11g1070 | 467 | MobiDBLite | consensus disorder prediction | 448 | 467 | - | - | |
Vvi11g1070 | 467 | Gene3D | Kinase associated domain 1, KA1 | 301 | 424 | - | - | |
Vvi11g1070 | 467 | Gene3D | Transferase(Phosphotransferase) domain 1 | 90 | 281 | - | - | |
Vvi11g1070 | 467 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 263 | IPR011009 | - | |
Vvi11g1070 | 467 | Pfam | Protein kinase domain | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g1070 | 467 | SMART | serkin_6 | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g1070 | 467 | ProSiteProfiles | Protein kinase domain profile. | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g1070 | 467 | CDD | CIPK_C | 306 | 422 | - | - | |
Vvi11g1070 | 467 | Pfam | NAF domain | 303 | 360 | IPR004041 | GO:0007165 | |
Vvi11g1070 | 467 | ProSiteProfiles | NAF domain profile. | 300 | 324 | IPR018451 | GO:0007165 | |
Vvi11g1070 | 467 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11g1070 | 467 | ProSitePatterns | Protein kinases ATP-binding region signature. | 16 | 39 | IPR017441 | GO:0005524 | |
Vvi11g1070 | 467 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 89 | - | - | |
Vvi11g1070 | 467 | PANTHER | SERINE/THREONINE KINASE | 6 | 424 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76033 | PF00069 | Pkinase | 5.40E-72 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g1070 | - | - | vvi:100259887 | 917.146 |