Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g128 ATGACAAATGTGAATTCTCTGGGATTAATCTCTGCAAGGACGAGTGCTGAAGCAGTGGAGATCCTAAAGCTCATGTCTGCAACTTACATGGTGGCACTTTGCCAGGCAGTTGACCTGAGACACCTCGAAGAAAACATGAGGGAAGTAGTGAAACATCTCATCACCCAAGTAGCAAGAAAAAAGCTTTACACAGATGAAGATGGAACCCTGTTAGAATCTCGTTTCTGCGAGAAAGAACTCCTGCAGGTTGTTGAAAACTTGCCAGTCTTCTCCTATCTCGATGACCCTACCAATCCTTCATACTCATTTTTGCCTCAACTCCGAGATGTACTAGTTGAAAGAGCTCTCAAAGACCCCAAATCCACCGACTCTGCAGGCTATTCCATTTTCAAGCGCATCCCCATATTTCTAGAGGAACTGGAGGAGAAACTTATTGAGAAGATATCAAAAGCAAGAGAAAGGTTTGATAATGGAGATTTCCCAATACCAAACAGAATCAAGAAATGCAGGACTTACCCCATATAG 525 43.05 MTNVNSLGLISARTSAEAVEILKLMSATYMVALCQAVDLRHLEENMREVVKHLITQVARKKLYTDEDGTLLESRFCEKELLQVVENLPVFSYLDDPTNPSYSFLPQLRDVLVERALKDPKSTDSAGYSIFKRIPIFLEELEEKLIEKISKARERFDNGDFPIPNRIKKCRTYPI* 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1327976 1330009 + Vvi11g128 Vvi11g128 771569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g128 174 PANTHER PHENYLALANINE AMMONIA-LYASE 2 174 - -
Vvi11g128 174 SUPERFAMILY L-aspartase-like 3 174 IPR008948 GO:0003824
Vvi11g128 174 PANTHER HISTIDINE AMMONIA-LYASE 2 174 IPR001106 -
Vvi11g128 174 Gene3D - 43 164 IPR023144 -
Vvi11g128 174 Pfam Aromatic amino acid lyase 4 51 IPR001106 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g128 K10775 - vvi:100255939 315.849